version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2182 72.08 +1 2207975..2208787 - 270 119384939 - Pden_2207 - binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 2183 68.83 0 2208807..2209823 - 338 119384940 - Pden_2208 - thioredoxin reductase 2184 66.07 0 2209988..2210488 + 166 119384941 - Pden_2209 - AsnC family transcriptional regulator 2185 54.34 -2 2210569..2211006 + 145 119384942 - Pden_2210 - hypothetical protein 2186 68.50 0 2211103..2211867 - 254 119384943 - Pden_2211 - hypothetical protein 2187 72.47 +1 2211851..2212918 - 355 119384944 - Pden_2212 - hypothetical protein 2188 69.36 0 2212915..2213805 - 296 119384945 - Pden_2213 - prolipoprotein diacylglyceryl transferase 2189 65.49 0 2213932..2214186 + 84 119384946 - Pden_2214 - hypothetical protein 2190 72.12 +1 2214481..2215506 + 341 119384947 - Pden_2215 - RluA family pseudouridine synthase 2191 64.68 0 2215573..2216478 + 301 119384948 - Pden_2216 - RNA polymerase factor sigma-32 2192 69.90 0 2216845..2217864 + 339 119384949 - Pden_2217 - hypothetical protein 2193 70.10 0 2217872..2218921 - 349 119384950 - Pden_2218 - sporulation domain-containing protein 2194 66.19 0 2218991..2219626 - 211 119384951 - Pden_2219 - uracil phosphoribosyltransferase 2195 68.01 0 2219623..2220591 - 322 119384952 - Pden_2220 - adenosine deaminase 2196 71.31 +1 2220588..2221772 - 394 119384953 - Pden_2221 - phosphopentomutase 2197 73.86 +1 2221769..2223061 - 430 119384954 deoA Pden_2222 - thymidine phosphorylase 2198 71.21 +1 2223058..2223453 - 131 119384955 - Pden_2223 - cytidine deaminase 2199 68.07 0 2223617..2225896 + 759 119384956 - Pden_2224 - malic enzyme 2200 66.56 0 2226148..2228052 + 634 119384957 - Pden_2225 - AMP-dependent synthetase and ligase 2201 69.97 0 2228138..2229469 - 443 119384958 - Pden_2226 - 3-phosphoshikimate 1-carboxyvinyltransferase 2202 67.66 0 2229547..2230248 - 233 119384959 trmB Pden_2227 - tRNA (guanine-N(7))-methyltransferase 2203 66.79 0 2230270..2231946 - 558 119384960 - Pden_2228 - beta-lactamase domain-containing protein 2204 63.97 0 2231939..2232718 - 259 119384961 - Pden_2229 - pantothenate kinase 2205 72.60 +1 2232722..2233480 - 252 119384962 - Pden_2230 - biotin--acetyl-CoA-carboxylase ligase 2206 66.20 0 2233473..2234972 - 499 119384963 - Pden_2231 - NADH dehydrogenase subunit N 2207 63.75 0 2234982..2236523 - 513 119384964 - Pden_2232 - NADH dehydrogenase subunit M 2208 63.78 0 2236525..2238636 - 703 119384965 - Pden_2233 - NADH dehydrogenase subunit L 2209 57.19 -2 2238643..2238948 - 101 119384966 - Pden_2234 - NADH-ubiquinone oxidoreductase, chain 4L 2210 65.17 0 2239048..2239647 - 199 119384967 - Pden_2235 - NADH dehydrogenase subunit J 2211 63.70 0 2239647..2240051 - 134 119384968 - Pden_2236 - carboxymuconolactone decarboxylase 2212 68.19 0 2240048..2240440 - 130 119384969 - Pden_2237 - carboxymuconolactone decarboxylase 2213 62.40 0 2240437..2240928 - 163 119384970 - Pden_2238 - NADH dehydrogenase subunit I 2214 61.85 -1 2241114..2242151 - 345 119384971 - Pden_2239 - NADH dehydrogenase subunit H 2215 67.71 0 2242170..2242937 - 255 119384972 - Pden_2240 - hypothetical protein 2216 67.21 0 2242943..2244967 - 674 119384973 - Pden_2241 - NADH dehydrogenase subunit G 2217 66.14 0 2245247..2245813 - 188 119384974 - Pden_2242 - hypothetical protein 2218 65.51 0 2245820..2247115 - 431 119384975 - Pden_2243 - NADH dehydrogenase I subunit F 2219 68.18 0 2247120..2247383 - 87 119384976 - Pden_2244 - hypothetical protein 2220 70.39 0 2247383..2248027 - 214 119384977 - Pden_2245 - hypothetical protein 2221 66.81 0 2248052..2248771 - 239 119384978 - Pden_2246 - NADH dehydrogenase subunit E 2222 65.62 0 2248771..2250009 - 412 119384979 - Pden_2247 - NADH dehydrogenase subunit D 2223 62.52 0 2250063..2250689 - 208 119384980 - Pden_2248 - NADH dehydrogenase subunit C 2224 66.48 0 2250693..2251220 - 175 119384981 - Pden_2249 - NADH dehydrogenase subunit B 2225 59.29 -1 2251217..2251582 - 121 119384982 - Pden_2250 - NADH dehydrogenase subunit A 2226 69.62 0 2251761..2252132 - 123 119384983 - Pden_2251 - hypothetical protein 2227 65.66 0 2252129..2255008 - 959 119384984 uvrA Pden_2252 - excinuclease ABC subunit A 2228 63.56 0 2255154..2255507 + 117 119384985 - Pden_2253 - glutathione-dependent formaldehyde-activating, GFA 2229 65.51 0 2255504..2256538 - 344 119384986 moaA Pden_2254 - molybdenum cofactor biosynthesis protein A 2230 74.01 +1 2256663..2257166 + 167 119384987 - Pden_2255 - hypothetical protein 2231 69.08 0 2257154..2257858 - 234 119384988 - Pden_2256 - hypothetical protein 2232 67.01 0 2258143..2259615 + 490 119384989 - Pden_2257 - succinic semialdehyde dehydrogenase 2233 65.19 0 2259661..2260407 - 248 119384990 - Pden_2258 - hypothetical protein 2234 70.05 0 2260568..2261188 + 206 119384991 - Pden_2259 - ribonuclease T2 2235 69.15 0 2261370..2261852 + 160 119384992 - Pden_2260 - hypothetical protein 2236 65.38 0 2261861..2262172 - 103 119384993 - Pden_2261 - TM2 domain-containing protein 2237 68.55 0 2262355..2264742 + 795 119384994 pheT Pden_2262 - phenylalanyl-tRNA synthetase subunit beta 2238 55.38 -2 2264921..2265478 + 185 119384995 - Pden_2263 - hypothetical protein 2239 64.44 0 2265660..2266376 - 238 119384996 - Pden_2264 - glutathione S-transferase domain-containing protein 2240 65.75 0 2266459..2266896 + 145 119384997 - Pden_2265 - large conductance mechanosensitive channel protein 2241 65.80 0 2267048..2267509 + 153 119384998 - Pden_2266 - AsnC family transcriptional regulator 2242 57.97 -2 2267563..2267769 - 68 119384999 rpsU Pden_2267 - 30S ribosomal protein S21 2243 69.14 0 2267894..2268580 + 228 119385000 - Pden_2268 - rpsU-divergently transcribed protein 2244 69.63 0 2268592..2269569 + 325 119385001 - Pden_2269 - alcohol dehydrogenase 2245 67.87 0 2269677..2270759 - 360 119385002 - Pden_2270 - phenylalanyl-tRNA synthetase, alpha subunit 2246 69.86 0 2270818..2271162 - 114 119385003 - Pden_2271 - arsenate reductase 2247 69.82 0 2271194..2272555 - 453 119385004 - Pden_2272 - cytochrome P450 2248 65.83 0 2272794..2273153 - 119 119385005 rplT Pden_2273 - 50S ribosomal protein L20 2249 59.70 -1 2273166..2273366 - 66 119385006 rpmI Pden_2274 - 50S ribosomal protein L35 2250 72.05 +1 2273475..2273864 - 129 119385007 - Pden_2275 - hypothetical protein 2251 67.50 0 2273905..2275350 - 481 119385008 - Pden_2276 - pyruvate kinase 2252 68.15 0 2275471..2276211 + 246 119385009 - Pden_2277 - N-formylglutamate amidohydrolase 2253 57.92 -2 2276961..2277200 - 79 119385010 - Pden_2278 - hypothetical protein 2254 59.24 -1 2277297..2277767 - 156 119385011 - Pden_2279 - hypothetical protein 2255 63.81 0 2277814..2278233 + 139 119385012 - Pden_2280 - hypothetical protein 2256 62.43 0 2278522..2279088 + 188 119385013 - Pden_2281 - Arc domain-containing protein 2257 50.89 -2 2279485..2280549 - 354 119385014 - Pden_2282 - TPR repeat-containing protein 2258 60.40 -1 2280660..2281010 - 116 119385015 - Pden_2283 - hypothetical protein 2259 64.21 0 2281578..2282513 + 311 119385016 - Pden_2285 - substrate-binding region of ABC-type glycine betaine transport system 2260 66.80 0 2282514..2284010 + 498 119385017 - Pden_2286 - sulfatase 2261 68.73 0 2284145..2284726 + 193 119385018 - Pden_2287 - hypothetical protein 2262 68.51 0 2284766..2285524 + 252 119385019 - Pden_2288 - monofunctional biosynthetic peptidoglycan transglycosylase 2263 64.03 0 2285541..2286299 + 252 119385020 - Pden_2289 - glutathione S-transferase domain-containing protein 2264 67.82 0 2286280..2287323 + 347 119385021 - Pden_2290 - hypothetical protein 2265 67.20 0 2287320..2288261 + 313 119385022 - Pden_2291 - hypothetical protein 2266 65.95 0 2288274..2289668 - 464 119385023 - Pden_2292 - hypothetical protein 2267 68.08 0 2289665..2291365 - 566 119385024 - Pden_2293 - glycosyl transferase family protein 2268 65.30 0 2291362..2292387 - 341 119385025 - Pden_2294 - hypothetical protein 2269 74.01 +1 2292415..2293653 - 412 119385026 - Pden_2295 - glycosyl transferase, group 1 2270 67.87 0 2293643..2294641 - 332 119385027 - Pden_2296 - UDP-glucose 4-epimerase 2271 64.53 0 2294647..2295537 - 296 119385028 - Pden_2297 - nucleotidyl transferase 2272 73.12 +1 2295684..2296892 - 402 119385029 - Pden_2298 - glycosyl transferase family protein 2273 70.91 +1 2296892..2297692 - 266 119385030 - Pden_2299 - 3-deoxy-manno-octulosonate cytidylyltransferase 2274 67.17 0 2297697..2298494 - 265 119385031 - Pden_2300 - 3'(2'),5'-bisphosphate nucleotidase 2275 61.80 -1 2298636..2299457 + 273 119385032 - Pden_2301 - ABC-2 type transporter 2276 63.28 0 2299715..2301631 + 638 119385033 - Pden_2302 - chaperone protein DnaK 2277 67.19 0 2301713..2302867 + 384 119385034 - Pden_2303 - chaperone protein DnaJ 2278 67.30 0 2302913..2303704 + 263 119385035 radC Pden_2304 - DNA repair protein RadC 2279 68.03 0 2303887..2304474 + 195 119385036 - Pden_2305 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 2280 62.13 -1 2304485..2305807 + 440 119385037 - Pden_2306 - cytochrome b/b6 domain-containing protein 2281 69.11 0 2305820..2307172 + 450 119385038 - Pden_2307 - cytochrome c1 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0