version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2144 64.70 0 2174500..2176227 + 575 119384901 - Pden_2169 - acetolactate synthase 3 catalytic subunit 2145 66.49 0 2176242..2176802 + 186 119384902 ilvH Pden_2170 - acetolactate synthase 3 regulatory subunit 2146 63.16 0 2176808..2177149 - 113 119384903 - Pden_2171 - hypothetical protein 2147 67.04 0 2177401..2178204 - 267 119384904 - Pden_2172 - peptidase M48, Ste24p 2148 63.10 0 2178277..2178528 + 83 119384905 - Pden_2173 - hypothetical protein 2149 71.49 +1 2178525..2178773 - 82 119384906 - Pden_2174 - hypothetical protein 2150 73.19 +1 2178879..2179445 + 188 119384907 - Pden_2175 - nitroreductase 2151 68.83 0 2179445..2180137 + 230 119384908 - Pden_2176 - hypothetical protein 2152 65.52 0 2180103..2180363 - 86 119384909 - Pden_2177 - hypothetical protein 2153 63.46 0 2180363..2180767 - 134 119384910 - Pden_2178 - glyoxalase/bleomycin resistance protein/dioxygenase 2154 71.33 +1 2180904..2181632 + 242 119384911 - Pden_2179 - response regulator receiver protein 2155 69.77 0 2181637..2182377 - 246 119384912 - Pden_2180 - GCN5-related N-acetyltransferase 2156 69.20 0 2182398..2183579 - 393 119384913 - Pden_2181 - hypothetical protein 2157 70.03 0 2183589..2184956 - 455 119384914 - Pden_2182 - hypothetical protein 2158 65.93 0 2185083..2186858 - 591 119384915 aspS Pden_2183 - aspartyl-tRNA synthetase 2159 66.67 0 2186919..2187575 - 218 119384916 - Pden_2184 - abortive infection protein 2160 66.41 0 2187551..2188333 - 260 119384917 - Pden_2185 - glycoside hydrolase family protein 2161 57.50 -2 2188538..2188897 + 119 119384918 - Pden_2186 - hypothetical protein 2162 72.10 +1 2188967..2190346 - 459 119384919 - Pden_2187 - D-lactate dehydrogenase (cytochrome) 2163 68.01 0 2190412..2191380 - 322 119384920 - Pden_2188 - hypothetical protein 2164 63.38 0 2191536..2192510 + 324 119384921 - Pden_2189 - cobalt chelatase, pCobS small subunit 2165 59.82 -1 2192507..2192944 + 145 119384922 - Pden_2190 - hypothetical protein 2166 69.30 0 2193033..2194895 + 620 119384923 - Pden_2191 - cobalt chelatase, pCobT subunit 2167 71.16 +1 2194934..2196247 + 437 119384924 - Pden_2192 - glycosyl transferase, group 1 2168 69.69 0 2196275..2198092 + 605 119384925 - Pden_2193 - peptidase M24 2169 64.95 0 2198283..2199329 - 348 119384926 - Pden_2194 - hypothetical protein 2170 75.79 +2 2199445..2200671 - 408 119384927 - Pden_2195 - hydroxypyruvate reductase 2171 69.09 0 2200671..2201621 - 316 119384928 - Pden_2196 - D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 2172 68.42 0 2201621..2201962 - 113 119384929 - Pden_2197 - export-related chaperone CsaA 2173 70.65 0 2201959..2202762 - 267 119384930 - Pden_2198 - pyrroline-5-carboxylate reductase 2174 63.87 0 2202801..2203301 - 166 119384931 - Pden_2199 - hypothetical protein 2175 72.27 +1 2203527..2204489 + 320 119384932 - Pden_2200 - aminotransferase, class I and II 2176 68.39 0 2204473..2205516 - 347 119384933 - Pden_2201 - phosphoribosylaminoimidazole carboxylase ATPase subunit 2177 68.67 0 2205509..2206006 - 165 119384934 - Pden_2202 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 2178 62.56 0 2206059..2206277 - 72 119384935 - Pden_2203 - hypothetical protein 2179 74.54 +1 2206440..2207036 + 198 119384936 - Pden_2204 - hypothetical protein 2180 65.21 0 2207159..2207569 + 136 119384937 - Pden_2205 - heat shock protein Hsp20 2181 64.91 0 2207583..2207810 + 75 119384938 - Pden_2206 - hypothetical protein 2182 72.08 +1 2207975..2208787 - 270 119384939 - Pden_2207 - binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 2183 68.83 0 2208807..2209823 - 338 119384940 - Pden_2208 - thioredoxin reductase 2184 66.07 0 2209988..2210488 + 166 119384941 - Pden_2209 - AsnC family transcriptional regulator 2185 54.34 -2 2210569..2211006 + 145 119384942 - Pden_2210 - hypothetical protein 2186 68.50 0 2211103..2211867 - 254 119384943 - Pden_2211 - hypothetical protein 2187 72.47 +1 2211851..2212918 - 355 119384944 - Pden_2212 - hypothetical protein 2188 69.36 0 2212915..2213805 - 296 119384945 - Pden_2213 - prolipoprotein diacylglyceryl transferase 2189 65.49 0 2213932..2214186 + 84 119384946 - Pden_2214 - hypothetical protein 2190 72.12 +1 2214481..2215506 + 341 119384947 - Pden_2215 - RluA family pseudouridine synthase 2191 64.68 0 2215573..2216478 + 301 119384948 - Pden_2216 - RNA polymerase factor sigma-32 2192 69.90 0 2216845..2217864 + 339 119384949 - Pden_2217 - hypothetical protein 2193 70.10 0 2217872..2218921 - 349 119384950 - Pden_2218 - sporulation domain-containing protein 2194 66.19 0 2218991..2219626 - 211 119384951 - Pden_2219 - uracil phosphoribosyltransferase 2195 68.01 0 2219623..2220591 - 322 119384952 - Pden_2220 - adenosine deaminase 2196 71.31 +1 2220588..2221772 - 394 119384953 - Pden_2221 - phosphopentomutase 2197 73.86 +1 2221769..2223061 - 430 119384954 deoA Pden_2222 - thymidine phosphorylase 2198 71.21 +1 2223058..2223453 - 131 119384955 - Pden_2223 - cytidine deaminase 2199 68.07 0 2223617..2225896 + 759 119384956 - Pden_2224 - malic enzyme 2200 66.56 0 2226148..2228052 + 634 119384957 - Pden_2225 - AMP-dependent synthetase and ligase 2201 69.97 0 2228138..2229469 - 443 119384958 - Pden_2226 - 3-phosphoshikimate 1-carboxyvinyltransferase 2202 67.66 0 2229547..2230248 - 233 119384959 trmB Pden_2227 - tRNA (guanine-N(7))-methyltransferase 2203 66.79 0 2230270..2231946 - 558 119384960 - Pden_2228 - beta-lactamase domain-containing protein 2204 63.97 0 2231939..2232718 - 259 119384961 - Pden_2229 - pantothenate kinase 2205 72.60 +1 2232722..2233480 - 252 119384962 - Pden_2230 - biotin--acetyl-CoA-carboxylase ligase 2206 66.20 0 2233473..2234972 - 499 119384963 - Pden_2231 - NADH dehydrogenase subunit N 2207 63.75 0 2234982..2236523 - 513 119384964 - Pden_2232 - NADH dehydrogenase subunit M 2208 63.78 0 2236525..2238636 - 703 119384965 - Pden_2233 - NADH dehydrogenase subunit L 2209 57.19 -2 2238643..2238948 - 101 119384966 - Pden_2234 - NADH-ubiquinone oxidoreductase, chain 4L 2210 65.17 0 2239048..2239647 - 199 119384967 - Pden_2235 - NADH dehydrogenase subunit J 2211 63.70 0 2239647..2240051 - 134 119384968 - Pden_2236 - carboxymuconolactone decarboxylase 2212 68.19 0 2240048..2240440 - 130 119384969 - Pden_2237 - carboxymuconolactone decarboxylase 2213 62.40 0 2240437..2240928 - 163 119384970 - Pden_2238 - NADH dehydrogenase subunit I 2214 61.85 -1 2241114..2242151 - 345 119384971 - Pden_2239 - NADH dehydrogenase subunit H 2215 67.71 0 2242170..2242937 - 255 119384972 - Pden_2240 - hypothetical protein 2216 67.21 0 2242943..2244967 - 674 119384973 - Pden_2241 - NADH dehydrogenase subunit G 2217 66.14 0 2245247..2245813 - 188 119384974 - Pden_2242 - hypothetical protein 2218 65.51 0 2245820..2247115 - 431 119384975 - Pden_2243 - NADH dehydrogenase I subunit F 2219 68.18 0 2247120..2247383 - 87 119384976 - Pden_2244 - hypothetical protein 2220 70.39 0 2247383..2248027 - 214 119384977 - Pden_2245 - hypothetical protein 2221 66.81 0 2248052..2248771 - 239 119384978 - Pden_2246 - NADH dehydrogenase subunit E 2222 65.62 0 2248771..2250009 - 412 119384979 - Pden_2247 - NADH dehydrogenase subunit D 2223 62.52 0 2250063..2250689 - 208 119384980 - Pden_2248 - NADH dehydrogenase subunit C 2224 66.48 0 2250693..2251220 - 175 119384981 - Pden_2249 - NADH dehydrogenase subunit B 2225 59.29 -1 2251217..2251582 - 121 119384982 - Pden_2250 - NADH dehydrogenase subunit A 2226 69.62 0 2251761..2252132 - 123 119384983 - Pden_2251 - hypothetical protein 2227 65.66 0 2252129..2255008 - 959 119384984 uvrA Pden_2252 - excinuclease ABC subunit A 2228 63.56 0 2255154..2255507 + 117 119384985 - Pden_2253 - glutathione-dependent formaldehyde-activating, GFA 2229 65.51 0 2255504..2256538 - 344 119384986 moaA Pden_2254 - molybdenum cofactor biosynthesis protein A 2230 74.01 +1 2256663..2257166 + 167 119384987 - Pden_2255 - hypothetical protein 2231 69.08 0 2257154..2257858 - 234 119384988 - Pden_2256 - hypothetical protein 2232 67.01 0 2258143..2259615 + 490 119384989 - Pden_2257 - succinic semialdehyde dehydrogenase 2233 65.19 0 2259661..2260407 - 248 119384990 - Pden_2258 - hypothetical protein 2234 70.05 0 2260568..2261188 + 206 119384991 - Pden_2259 - ribonuclease T2 2235 69.15 0 2261370..2261852 + 160 119384992 - Pden_2260 - hypothetical protein 2236 65.38 0 2261861..2262172 - 103 119384993 - Pden_2261 - TM2 domain-containing protein 2237 68.55 0 2262355..2264742 + 795 119384994 pheT Pden_2262 - phenylalanyl-tRNA synthetase subunit beta 2238 55.38 -2 2264921..2265478 + 185 119384995 - Pden_2263 - hypothetical protein 2239 64.44 0 2265660..2266376 - 238 119384996 - Pden_2264 - glutathione S-transferase domain-containing protein 2240 65.75 0 2266459..2266896 + 145 119384997 - Pden_2265 - large conductance mechanosensitive channel protein 2241 65.80 0 2267048..2267509 + 153 119384998 - Pden_2266 - AsnC family transcriptional regulator 2242 57.97 -2 2267563..2267769 - 68 119384999 rpsU Pden_2267 - 30S ribosomal protein S21 2243 69.14 0 2267894..2268580 + 228 119385000 - Pden_2268 - rpsU-divergently transcribed protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0