version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2050 65.52 0 2076962..2077396 + 144 119384807 - Pden_2075 - PilT domain-containing protein 2051 64.85 0 2077384..2078100 - 238 119384808 - Pden_2076 - ECF subfamily RNA polymerase sigma-24 factor 2052 67.52 0 2078198..2078431 - 77 119384809 - Pden_2077 - hypothetical protein 2053 61.49 -1 2078525..2080687 - 720 119384810 - Pden_2078 - hypothetical protein 2054 59.22 -1 2080770..2081024 + 84 119384811 - Pden_2079 - hypothetical protein 2055 63.38 0 2081021..2081476 + 151 119384812 - Pden_2080 - hypothetical protein 2056 64.56 0 2081476..2082801 + 441 119384813 - Pden_2081 - recombinase 2057 65.10 0 2082798..2083181 + 127 119384814 - Pden_2082 - hypothetical protein 2058 67.62 0 2083185..2084021 - 278 119384815 - Pden_2083 - hypothetical protein 2059 63.95 0 2084031..2084288 - 85 119384816 - Pden_2084 - hypothetical protein 2060 62.38 0 2084523..2085431 + 302 119384817 - Pden_2085 - hypothetical protein 2061 60.95 -1 2085415..2087601 + 728 119384818 - Pden_2086 - RNA polymerase, sigma 32 subunit, RpoH 2062 64.40 0 2087606..2089108 + 500 119384819 - Pden_2087 - hypothetical protein 2063 60.01 -1 2089105..2091972 + 955 119384820 - Pden_2088 - endonuclease 2064 62.49 0 2091956..2092960 + 334 119384821 - Pden_2089 - hypothetical protein 2065 58.46 -1 2092962..2094764 + 600 119384822 - Pden_2090 - hypothetical protein 2066 52.99 -2 2094772..2095239 + 155 119384823 - Pden_2091 - hypothetical protein 2067 62.57 0 2095223..2095783 - 186 119384824 - Pden_2092 - transposase, IS4 family protein 2068 71.51 +1 2096063..2097922 + 619 119384825 - Pden_2093 - 3-deoxy-D-manno-octulosonic-acid transferase-like 2069 72.73 +1 2097919..2098908 + 329 119384826 - Pden_2094 - tetraacyldisaccharide 4'-kinase 2070 63.54 0 2098948..2099619 - 223 119384827 - Pden_2095 - DSBA oxidoreductase 2071 69.98 0 2099616..2100158 - 180 119384828 - Pden_2096 - hypothetical protein 2072 70.72 0 2100310..2101296 + 328 119384829 - Pden_2097 - HhH-GPD family protein 2073 63.52 0 2101374..2102516 + 380 119384830 - Pden_2098 - alkane 1-monooxygenase 2074 65.65 0 2102511..2103296 - 261 119384831 - Pden_2099 - hypothetical protein 2075 69.52 0 2103293..2104414 - 373 119384832 - Pden_2100 - hypothetical protein 2076 65.69 0 2104472..2105602 - 376 119384833 - Pden_2101 - DNA methylase N-4/N-6 domain-containing protein 2077 67.93 0 2105691..2106323 - 210 119384834 - Pden_2102 - ribonuclease H 2078 69.79 0 2106320..2106799 - 159 119384835 - Pden_2103 - ureidoglycolate hydrolase 2079 65.31 0 2106857..2108032 - 391 119384836 - Pden_2104 - major facilitator transporter 2080 67.87 0 2108324..2109073 + 249 119384837 - Pden_2105 - UbiC transcription regulator-associated domain-containing protein 2081 70.24 0 2109183..2110664 + 493 119384838 - Pden_2106 - ErfK/YbiS/YcfS/YnhG family protein 2082 70.13 0 2110666..2111502 + 278 119384839 - Pden_2107 - extensin family protein 2083 65.16 0 2111506..2112237 - 243 119384840 - Pden_2108 - CRP/FNR family transcriptional regulator 2084 69.81 0 2112344..2113678 - 444 119384841 - Pden_2109 - FliI/YscN family ATPase 2085 68.46 0 2113787..2114176 + 129 119384842 flgB Pden_2110 - flagellar basal body rod protein FlgB 2086 63.61 0 2114188..2114580 + 130 119384843 flgC Pden_2111 - flagellar basal body rod protein FlgC 2087 67.74 0 2114592..2114870 + 92 119384844 - Pden_2112 - flagellar hook-basal body complex protein FliE 2088 62.55 0 2114881..2115147 + 88 119384845 - Pden_2113 - export protein FliQ 2089 67.09 0 2115151..2115867 + 238 119384846 flgF Pden_2114 - flagellar basal body rod protein FlgF 2090 65.90 0 2115879..2116664 + 261 119384847 flgG Pden_2115 - flagellar basal body rod protein FlgG 2091 68.35 0 2116664..2117080 + 138 119384848 flgA Pden_2116 - flagellar basal body P-ring biosynthesis protein FlgA 2092 66.27 0 2117091..2117843 + 250 119384849 flgH Pden_2117 - flagellar basal body L-ring protein 2093 66.67 0 2117857..2118390 + 177 119384850 - Pden_2118 - hypothetical protein 2094 65.67 0 2119104..2120006 - 300 119384851 - Pden_2119 - glucose-1-phosphate thymidylyltransferase 2095 70.54 0 2120003..2120854 - 283 119384852 - Pden_2120 - dTDP-4-dehydrorhamnose reductase 2096 66.09 0 2120851..2121888 - 345 119384853 - Pden_2121 - dTDP-glucose 4,6-dehydratase 2097 61.68 -1 2121885..2122466 - 193 119384854 - Pden_2122 - dTDP-4-dehydrorhamnose 3,5-epimerase 2098 68.60 0 2122642..2123313 + 223 119384855 - Pden_2123 - hypothetical protein 2099 67.05 0 2123332..2126172 + 946 119384856 - Pden_2124 - hemolysin-type calcium-binding region 2100 65.07 0 2126169..2126921 - 250 119384857 - Pden_2125 - ABC-2 type transporter 2101 73.00 +1 2127145..2129103 + 652 119384858 - Pden_2126 - capsule polysaccharide export protein-like 2102 67.40 0 2129108..2129785 + 225 119384859 - Pden_2127 - ABC transporter related 2103 63.68 0 2129883..2130284 + 133 119384860 - Pden_2128 - hypothetical protein 2104 68.73 0 2130281..2130862 + 193 119384861 - Pden_2129 - hypothetical protein 2105 70.28 0 2130871..2131728 + 285 119384862 - Pden_2130 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2106 58.90 -1 2131809..2132297 - 162 119384863 - Pden_2131 - GCN5-related N-acetyltransferase 2107 68.20 0 2132432..2133934 - 500 119384864 - Pden_2132 - anthranilate synthase component I 2108 70.39 0 2133934..2135892 - 652 119384865 - Pden_2133 - putative peptidyl-prolyl cis-trans isomerse 2109 71.00 +1 2136018..2137193 - 391 119384866 - Pden_2134 - hypothetical protein 2110 75.07 +2 2137203..2137916 - 237 119384867 - Pden_2135 - hypothetical protein 2111 67.01 0 2138071..2138661 + 196 119384868 - Pden_2136 - glutamine amidotransferase of anthranilate synthase 2112 73.03 +1 2138658..2139695 + 345 119384869 - Pden_2137 - anthranilate phosphoribosyltransferase 2113 71.00 +1 2139688..2140356 + 222 119384870 - Pden_2138 - uracil-DNA glycosylase 2114 68.43 0 2140366..2141157 + 263 119384871 - Pden_2139 - indole-3-glycerol-phosphate synthase 2115 68.99 0 2141154..2141627 + 157 119384872 - Pden_2140 - molybdenum cofactor biosynthesis protein C 2116 71.70 +1 2141638..2142810 + 390 119384873 - Pden_2141 - molybdenum cofactor synthesis domain-containing protein 2117 65.67 0 2142920..2143618 + 232 119384874 - Pden_2142 - LexA repressor 2118 66.49 0 2143743..2144900 + 385 119384875 - Pden_2143 - Serine-type D-Ala-D-Ala carboxypeptidase 2119 70.33 0 2144912..2145511 + 199 119384876 - Pden_2144 - dTMP kinase 2120 71.95 +1 2145508..2146605 + 365 119384877 - Pden_2145 - DNA polymerase III subunit delta' 2121 67.92 0 2146618..2147415 + 265 119384878 - Pden_2146 - TatD family hydrolase 2122 66.92 0 2147412..2148212 + 266 119384879 - Pden_2147 - beta-lactamase domain-containing protein 2123 66.67 0 2148209..2149153 + 314 119384880 - Pden_2148 - auxin efflux carrier 2124 64.99 0 2149189..2150142 - 317 119384881 - Pden_2149 - binding-protein-dependent transport systems inner membrane component 2125 67.36 0 2150148..2151449 - 433 119384882 - Pden_2150 - binding-protein-dependent transport systems inner membrane component 2126 64.91 0 2151524..2152603 - 359 119384883 - Pden_2151 - polyamine ABC trasnporter, periplasmic polyamine-binding protein 2127 65.84 0 2152702..2153784 - 360 119384884 - Pden_2152 - extracellular solute-binding protein 2128 65.04 0 2153814..2154917 - 367 119384885 - Pden_2153 - spermidine/putrescine ABC transporter ATPase subunit 2129 64.90 0 2155122..2155688 - 188 119384886 - Pden_2154 - hypothetical protein 2130 70.19 0 2155791..2156528 - 245 119384887 - Pden_2155 - short chain dehydrogenase 2131 71.47 +1 2156531..2158153 - 540 119384888 - Pden_2156 - FGGY-family pentulose kinase 2132 65.03 0 2158182..2158913 - 243 119384889 - Pden_2157 - short-chain dehydrogenase/reductase SDR 2133 67.48 0 2158950..2159927 - 325 119384890 - Pden_2158 - inner-membrane translocator 2134 65.00 0 2159917..2161419 - 500 119384891 - Pden_2159 - ABC transporter related 2135 66.67 0 2161490..2162395 - 301 119384892 - Pden_2160 - periplasmic binding protein/LacI transcriptional regulator 2136 64.86 0 2162495..2163379 - 294 119384893 - Pden_2161 - helix-turn-helix domain-containing protein 2137 70.23 0 2163630..2165087 - 485 119384894 - Pden_2162 - xylulokinase 2138 67.44 0 2165092..2166129 - 345 119384895 - Pden_2163 - alcohol dehydrogenase 2139 66.02 0 2166333..2166797 - 154 119384896 - Pden_2164 - GatB/Yqey domain-containing protein 2140 66.75 0 2166966..2168114 + 382 119384897 - Pden_2165 - carbamoyl phosphate synthase small subunit 2141 69.00 0 2168202..2170298 + 698 119384898 - Pden_2166 - general secretion pathway protein E 2142 71.23 +1 2170435..2173236 - 933 119384899 - Pden_2167 - (glutamate--ammonia-ligase) adenylyltransferase 2143 65.84 0 2173462..2174307 + 281 119384900 - Pden_2168 - arginyl-tRNA-protein transferase 2144 64.70 0 2174500..2176227 + 575 119384901 - Pden_2169 - acetolactate synthase 3 catalytic subunit 2145 66.49 0 2176242..2176802 + 186 119384902 ilvH Pden_2170 - acetolactate synthase 3 regulatory subunit 2146 63.16 0 2176808..2177149 - 113 119384903 - Pden_2171 - hypothetical protein 2147 67.04 0 2177401..2178204 - 267 119384904 - Pden_2172 - peptidase M48, Ste24p 2148 63.10 0 2178277..2178528 + 83 119384905 - Pden_2173 - hypothetical protein 2149 71.49 +1 2178525..2178773 - 82 119384906 - Pden_2174 - hypothetical protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0