version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 158 55.41 -2 141246..141467 - 73 119382915 - Pden_0158 - hypothetical protein 159 57.76 -2 141627..141974 - 115 119382916 - Pden_0159 - hypothetical protein 160 67.41 0 142033..145134 - 1033 119382917 - Pden_0160 - acriflavin resistance protein 161 71.30 +1 145138..146280 - 380 119382918 - Pden_0161 - RND family efflux transporter MFP subunit 162 65.49 0 146505..147182 - 225 119382919 - Pden_0162 - MltA-interacting MipA family protein 163 57.30 -2 147265..147627 + 120 119382920 - Pden_0163 - hypothetical protein 164 64.11 0 147614..148240 + 208 119382921 - Pden_0164 - TetR family transcriptional regulator 165 67.84 0 148664..149005 - 113 119382922 - Pden_0166 - regulatory protein, ArsR 166 68.21 0 149251..150348 + 365 119382923 - Pden_0167 - cupin 2 domain-containing protein 167 71.34 +1 150370..151140 + 256 119382924 - Pden_0168 - hypothetical protein 168 69.57 0 151137..151964 - 275 119382925 - Pden_0169 - regulatory proteins, IclR 169 64.18 0 151979..152380 - 133 119382926 - Pden_0170 - thioesterase superfamily protein 170 64.83 0 152463..153608 + 381 119382927 - Pden_0171 - monooxygenase, FAD-binding 171 68.41 0 153619..155283 + 554 119382928 - Pden_0172 - benzoate-CoA ligase family 172 68.64 0 155383..156093 + 236 119382929 - Pden_0173 - fumarylacetoacetate (FAA) hydrolase 173 66.51 0 156090..156743 + 217 119382930 - Pden_0174 - maleylacetoacetate isomerase 174 64.55 0 156769..157950 + 393 119382931 - Pden_0175 - putative ABC transporter binding protein 175 66.02 0 157992..158912 + 306 119382932 - Pden_0176 - inner-membrane translocator 176 65.57 0 158917..159918 + 333 119382933 - Pden_0177 - inner-membrane translocator 177 69.87 0 159915..160664 + 249 119382934 - Pden_0178 - ABC transporter related 178 67.24 0 160664..161365 + 233 119382935 - Pden_0179 - ABC transporter related 179 68.66 0 161423..162874 + 483 119382936 - Pden_0180 - aldehyde dehydrogenase 180 69.29 0 162937..164652 + 571 119382937 - Pden_0181 - glucose-methanol-choline oxidoreductase 181 63.44 0 164730..165875 + 381 119382938 - Pden_0182 - beta-lactamase-like protein 182 68.97 0 165932..167233 - 433 119382939 - Pden_0183 - D-amino acid dehydrogenase small subunit 183 66.38 0 167506..168204 - 232 119382940 - Pden_0184 - hypothetical protein 184 65.58 0 168231..168968 - 245 119382941 - Pden_0185 - hypothetical protein 185 66.41 0 169001..170164 - 387 119382942 - Pden_0186 - amidohydrolase 186 60.52 -1 170313..170816 + 167 119382943 - Pden_0187 - MarR family transcriptional regulator 187 65.07 0 170847..171662 - 271 119382944 - Pden_0188 - regulatory proteins, IclR 188 65.76 0 171675..173552 - 625 119382945 - Pden_0189 - TRAP C4-dicarboxylate transport system permease DctM subunit 189 61.77 -1 173552..174082 - 176 119382946 - Pden_0190 - tripartite ATP-independent periplasmic transporter DctQ 190 57.49 -2 174180..174593 - 137 119382947 - Pden_0191 - glyoxalase/bleomycin resistance protein/dioxygenase 191 69.52 0 174620..175390 - 256 119382948 - Pden_0192 - short-chain dehydrogenase/reductase SDR 192 64.19 0 175536..176624 - 362 119382949 - Pden_0193 - TRAP dicarboxylate transporter- DctP subunit 193 70.67 0 176899..177723 + 274 119382950 - Pden_0194 - hypothetical protein 194 68.91 0 177720..178925 + 401 119382951 - Pden_0195 - L-carnitine dehydratase/bile acid-inducible protein F 195 66.42 0 178909..179730 + 273 119382952 - Pden_0196 - short-chain dehydrogenase/reductase SDR 196 71.31 +1 179751..181280 + 509 119382953 - Pden_0197 - 3-hydroxybutyryl-CoA dehydrogenase 197 67.44 0 181335..182495 - 386 119382954 - Pden_0198 - butyryl-CoA dehydrogenase 198 72.99 +1 183912..185984 - 690 119382955 - Pden_0201 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 199 69.87 0 186326..186856 + 176 119382956 - Pden_0202 - flavin reductase domain-containing protein 200 64.00 0 186916..188004 + 362 119382957 - Pden_0203 - luciferase family protein 201 69.49 0 188036..188707 + 223 119382958 - Pden_0204 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 202 66.67 0 188774..189028 - 84 119382959 - Pden_0205 - hypothetical protein 203 66.67 0 189154..189945 - 263 119382960 - Pden_0206 - short-chain dehydrogenase/reductase SDR 204 64.56 0 190129..191124 - 331 119382961 - Pden_0207 - alpha/beta hydrolase fold 205 58.89 -1 191172..191351 - 59 119382962 - Pden_0208 - 4-oxalocrotonate tautomerase 206 68.98 0 191454..192362 + 302 119382963 - Pden_0209 - LysR family transcriptional regulator 207 63.38 0 192405..193013 - 202 119382964 - Pden_0210 - hypothetical protein 208 64.54 0 193178..193600 - 140 119382965 - Pden_0211 - MerR family transcriptional regulator 209 70.75 0 193651..195927 + 758 119382966 - Pden_0212 - heavy metal translocating P-type ATPase 210 71.19 +1 195927..196523 + 198 119382967 - Pden_0213 - S-isoprenylcysteine methyltransferase-like protein 211 65.55 0 196604..197680 - 358 119382968 - Pden_0214 - arsenical-resistance protein 212 66.20 0 197709..198137 - 142 119382969 - Pden_0215 - arsenate reductase 213 67.41 0 198147..198683 - 178 119382970 - Pden_0216 - protein tyrosine phosphatase 214 67.77 0 198676..199038 - 120 119382971 - Pden_0217 - regulatory protein, ArsR 215 66.22 0 199089..199535 + 148 119382972 - Pden_0218 - LysR family transcriptional regulator 216 65.62 0 199766..200146 + 126 119382973 - Pden_0219 - hypothetical protein 217 62.33 -1 200561..201643 + 360 119382974 - Pden_0220 - luciferase family protein 218 67.01 0 201702..202565 + 287 119382975 - Pden_0221 - hypothetical protein 219 68.47 0 202555..203775 + 406 119382976 - Pden_0222 - L-carnitine dehydratase/bile acid-inducible protein F 220 67.99 0 203895..205325 + 476 119382977 - Pden_0223 - succinate-semialdehyde dehydrogenase (NAD(P)(+)) 221 65.48 0 205387..207240 - 617 119382978 - Pden_0224 - sigma-54 dependent trancsriptional regulator 222 61.88 -1 207290..207832 - 180 119382979 - Pden_0225 - flavin reductase domain-containing protein 223 63.74 0 208050..208970 - 306 119382980 - Pden_0226 - luciferase family protein 224 66.67 0 209038..209307 - 89 119382981 - Pden_0227 - hypothetical protein 225 63.70 0 209307..209846 - 179 119382982 - Pden_0228 - xylose isomerase domain-containing protein 226 65.16 0 209861..210658 - 265 119382983 - Pden_0229 - xylose isomerase domain-containing protein 227 64.72 0 210655..211734 - 359 119382984 - Pden_0230 - luciferase family protein 228 66.22 0 211824..212726 + 300 119382985 - Pden_0231 - LysR family transcriptional regulator 229 63.92 0 212737..213429 - 230 119382986 - Pden_0232 - TetR family transcriptional regulator 230 68.96 0 213456..215417 + 653 119382987 - Pden_0233 - membrane protein-like 231 71.01 +1 215564..215908 + 114 119382988 - Pden_0234 - hypothetical protein 232 65.78 0 215905..216918 - 337 119382989 - Pden_0235 - oligopeptide/dipeptide ABC transporter, ATPase subunit 233 66.27 0 216915..217913 - 332 119382990 - Pden_0236 - oligopeptide/dipeptide ABC transporter, ATPase subunit 234 65.52 0 217913..218785 - 290 119382991 - Pden_0237 - binding-protein-dependent transport systems inner membrane component 235 64.85 0 218785..219720 - 311 119382992 - Pden_0238 - binding-protein-dependent transport systems inner membrane component 236 64.28 0 219738..221327 - 529 119382993 - Pden_0239 - extracellular solute-binding protein 237 65.50 0 221408..222094 - 228 119382994 - Pden_0240 - GntR family transcriptional regulator 238 66.86 0 222145..223182 + 345 119382995 - Pden_0241 - (R)-2-hydroxyacid dehydrogenase 239 67.86 0 223208..224464 + 418 119382996 - Pden_0242 - iron-containing alcohol dehydrogenase 240 68.15 0 224461..225939 + 492 119382997 - Pden_0243 - succinate-semialdehyde dehydrogenase (NAD(P)(+)) 241 68.49 0 225977..227128 + 383 119382998 - Pden_0244 - mandelate racemase/muconate lactonizing protein 242 68.18 0 227187..228044 + 285 119382999 - Pden_0245 - 5-carboxymethyl-2-hydroxymuconate delta-isomerase 243 62.40 0 228259..229149 + 296 119383000 - Pden_0246 - xylose isomerase domain-containing protein 244 65.04 0 229193..230239 + 348 119383001 - Pden_0247 - periplasmic binding protein/LacI transcriptional regulator 245 66.11 0 230457..231896 + 479 119383002 - Pden_0248 - ABC transporter related 246 65.52 0 231893..232855 + 320 119383003 - Pden_0249 - inner-membrane translocator 247 64.93 0 232852..233715 + 287 119383004 - Pden_0250 - DNA-binding transcriptional repressor RpiR 248 68.80 0 233732..234574 + 280 119383005 - Pden_0251 - ribokinase-like domain-containing protein 249 53.57 -2 234598..234849 - 83 119383006 - Pden_0252 - transposase (class I) 250 63.05 0 234955..235479 - 174 119383007 - Pden_0253 - hypothetical protein 251 54.84 -2 235511..235789 + 92 119383008 - Pden_0254 - hypothetical protein 252 56.63 -2 236307..236864 + 185 119383009 - Pden_0255 - hypothetical protein 253 65.49 0 236988..237242 + 84 119383010 - Pden_0256 - hypothetical protein 254 65.24 0 237429..237779 - 116 119383011 - Pden_0257 - hypothetical protein 255 61.82 -1 237776..238126 - 116 119383012 - Pden_0258 - hypothetical protein 256 65.76 0 238183..238512 + 109 119383013 - Pden_0259 - hypothetical protein 257 62.32 -1 238789..239064 - 91 119383014 - Pden_0260 - hypothetical protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0