version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1973 72.46 +1 2004932..2006002 + 356 119384730 - Pden_1998 - metalloendopeptidase glycoprotease family 1974 71.64 +1 2005999..2006943 + 314 119384731 - Pden_1999 - glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 1975 64.49 0 2006940..2007215 + 91 119384732 - Pden_2000 - YCII-related 1976 64.79 0 2007215..2007640 + 141 119384733 - Pden_2001 - hypothetical protein 1977 67.78 0 2007683..2009476 + 597 119384734 - Pden_2002 - lipid ABC transporter ATPase/inner membrane protein 1978 67.14 0 2009604..2010026 - 140 119384735 - Pden_2003 - Allergen V5/Tpx-1 family protein 1979 63.79 0 2010277..2010762 + 161 119384736 - Pden_2004 - hypothetical protein 1980 66.83 0 2010891..2012780 + 629 119384737 - Pden_2005 - acyl-CoA synthetase 1981 56.27 -2 2012982..2014001 + 339 119384738 - Pden_2006 - hypothetical protein 1982 56.35 -2 2014058..2015065 + 335 119384739 - Pden_2007 - hypothetical protein 1983 62.80 0 2015124..2016779 - 551 119384740 - Pden_2008 - putative ABC transporter ATP-binding protein 1984 63.64 0 2016852..2017709 - 285 119384741 - Pden_2009 - sulfotransferase 1985 67.03 0 2017786..2019177 - 463 119384742 - Pden_2010 - MiaB-like tRNA modifying enzyme YliG 1986 64.33 0 2019275..2019745 + 156 119384743 - Pden_2011 - hypothetical protein 1987 67.18 0 2019730..2020119 + 129 119384744 - Pden_2012 - hypothetical protein 1988 63.91 0 2020124..2020885 - 253 119384745 - Pden_2013 - ABC-2 type transporter 1989 66.88 0 2020882..2021811 - 309 119384746 - Pden_2014 - ABC transporter related 1990 70.63 0 2021929..2022711 - 260 119384747 - Pden_2015 - phospholipid/glycerol acyltransferase 1991 71.83 +1 2022711..2023640 - 309 119384748 - Pden_2016 - hypothetical protein 1992 66.81 0 2023637..2024311 - 224 119384749 - Pden_2017 - ABC transporter related 1993 71.67 +1 2024436..2025395 + 319 119384750 - Pden_2018 - Zinc finger-domain-containing protein 1994 72.73 +1 2025475..2027979 - 834 119384751 - Pden_2019 - hypothetical protein 1995 66.98 0 2028070..2029335 - 421 119384752 - Pden_2020 - diaminopimelate decarboxylase 1996 69.20 0 2029335..2029610 - 91 119384753 - Pden_2021 - hypothetical protein 1997 67.45 0 2029755..2031164 - 469 119384754 - Pden_2022 - argininosuccinate lyase 1998 70.78 0 2031256..2031741 + 161 119384755 - Pden_2023 - redoxin domain-containing protein 1999 65.47 0 2031719..2032303 - 194 119384756 - Pden_2024 - DNA-3-methyladenine glycosylase I 2000 64.13 0 2032396..2033223 + 275 119384757 - Pden_2025 - diguanylate phosphodiesterase 2001 68.45 0 2033477..2034652 + 391 119384758 - Pden_2026 - acetyl-CoA acetyltransferase 2002 63.91 0 2034739..2035464 + 241 119384759 - Pden_2027 - acetoacetyl-CoA reductase 2003 54.79 -2 2035563..2035781 - 72 119384760 - Pden_2028 - hypothetical protein 2004 71.54 +1 2035786..2036544 - 252 119384761 - Pden_2029 - methyltransferase small 2005 64.79 0 2036537..2036749 - 70 119384762 - Pden_2030 - hypothetical protein 2006 68.86 0 2036825..2037826 + 333 119384763 - Pden_2031 - trans-hexaprenyltranstransferase 2007 66.25 0 2037929..2039377 - 482 119384764 - Pden_2032 - ammonium transporter 2008 68.90 0 2039634..2041964 + 776 119384765 - Pden_2033 - 1A family penicillin-binding protein 2009 66.34 0 2042017..2042622 - 201 119384766 - Pden_2034 - toluene tolerance family protein 2010 65.43 0 2042603..2043328 - 241 119384767 - Pden_2035 - VacJ family lipoprotein 2011 69.99 0 2043489..2045231 + 580 119384768 - Pden_2036 - type I secretion system ATPase 2012 68.76 0 2045228..2046661 + 477 119384769 - Pden_2037 - HlyD family type I secretion membrane fusion protein 2013 66.67 0 2046692..2046952 + 86 119384770 - Pden_2038 - hypothetical protein 2014 64.72 0 2047060..2047986 - 308 119384771 - Pden_2039 - ornithine carbamoyltransferase 2015 69.60 0 2048084..2048560 - 158 119384772 - Pden_2040 - GCN5-related N-acetyltransferase 2016 68.54 0 2048553..2049725 - 390 119384773 - Pden_2041 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 2017 65.82 0 2049899..2050720 - 273 119384774 - Pden_2042 - ABC-2 type transporter 2018 73.27 +1 2050852..2051457 + 201 119384775 - Pden_2043 - GcrA cell cycle regulator 2019 73.65 +1 2051458..2051901 + 147 119384776 - Pden_2044 - NUDIX hydrolase 2020 64.34 0 2052010..2053728 + 572 119384777 - Pden_2045 - methionyl-tRNA synthetase 2021 63.17 0 2053922..2056063 + 713 119384778 - Pden_2046 - TonB-dependent receptor 2022 68.62 0 2056156..2057076 + 306 119384779 - Pden_2047 - arginase 2023 63.91 0 2057392..2057754 - 120 119384780 - Pden_2048 - hypothetical protein 2024 63.68 0 2057841..2058308 - 155 119384781 - Pden_2049 - hypothetical protein 2025 62.67 0 2059246..2059770 - 174 119384782 - Pden_2050 - hypothetical protein 2026 62.37 -1 2059763..2060041 - 92 119384783 - Pden_2051 - hypothetical protein 2027 63.33 0 2060592..2060891 + 99 119384784 - Pden_2052 - hypothetical protein 2028 63.47 0 2060891..2061109 + 72 119384785 - Pden_2053 - hypothetical protein 2029 55.30 -2 2061405..2062328 + 307 119384786 - Pden_2054 - hypothetical protein 2030 67.64 0 2063243..2063758 + 171 119384787 - Pden_2055 - hypothetical protein 2031 66.81 0 2063766..2065175 - 469 119384788 - Pden_2056 - hypothetical protein 2032 63.68 0 2065343..2065744 + 133 119384789 - Pden_2057 - hypothetical protein 2033 67.44 0 2065737..2066510 - 257 119384790 - Pden_2058 - hypothetical protein 2034 61.29 -1 2066523..2066894 - 123 119384791 - Pden_2059 - IS5 family transposase OrfA 2035 53.64 -2 2067123..2067452 + 109 119384792 - Pden_2060 - HNH endonuclease 2036 62.83 0 2067435..2068970 - 511 119384793 - Pden_2061 - DNA-cytosine methyltransferase 2037 63.23 0 2069038..2069502 + 154 119384794 - Pden_2062 - DNA mismatch endonuclease vsr 2038 66.46 0 2069678..2070169 - 163 119384795 - Pden_2063 - phage terminase large subunit 2039 67.73 0 2070153..2070623 - 156 119384796 - Pden_2064 - P27 family phage terminase small subunit 2040 58.45 -1 2070830..2071036 + 68 119384797 - Pden_2065 - cold-shock DNA-binding domain-containing protein 2041 59.15 -1 2071116..2071421 + 101 119384798 - Pden_2066 - hypothetical protein 2042 60.89 -1 2071691..2071915 - 74 119384799 - Pden_2067 - hypothetical protein 2043 67.03 0 2071912..2073303 - 463 119384800 - Pden_2068 - nuclease 2044 68.43 0 2073402..2073797 - 131 119384801 - Pden_2069 - HNH endonuclease 2045 70.37 0 2073885..2074262 - 125 119384802 - Pden_2070 - hypothetical protein 2046 63.80 0 2074255..2074743 - 162 119384803 - Pden_2071 - hypothetical protein 2047 67.27 0 2074747..2076405 - 552 119384804 - Pden_2072 - hypothetical protein 2048 62.19 -1 2076402..2076602 - 66 119384805 - Pden_2073 - hypothetical protein 2049 69.58 0 2076726..2076965 + 79 119384806 - Pden_2074 - putative plasmid stability protein 2050 65.52 0 2076962..2077396 + 144 119384807 - Pden_2075 - PilT domain-containing protein 2051 64.85 0 2077384..2078100 - 238 119384808 - Pden_2076 - ECF subfamily RNA polymerase sigma-24 factor 2052 67.52 0 2078198..2078431 - 77 119384809 - Pden_2077 - hypothetical protein 2053 61.49 -1 2078525..2080687 - 720 119384810 - Pden_2078 - hypothetical protein 2054 59.22 -1 2080770..2081024 + 84 119384811 - Pden_2079 - hypothetical protein 2055 63.38 0 2081021..2081476 + 151 119384812 - Pden_2080 - hypothetical protein 2056 64.56 0 2081476..2082801 + 441 119384813 - Pden_2081 - recombinase 2057 65.10 0 2082798..2083181 + 127 119384814 - Pden_2082 - hypothetical protein 2058 67.62 0 2083185..2084021 - 278 119384815 - Pden_2083 - hypothetical protein 2059 63.95 0 2084031..2084288 - 85 119384816 - Pden_2084 - hypothetical protein 2060 62.38 0 2084523..2085431 + 302 119384817 - Pden_2085 - hypothetical protein 2061 60.95 -1 2085415..2087601 + 728 119384818 - Pden_2086 - RNA polymerase, sigma 32 subunit, RpoH 2062 64.40 0 2087606..2089108 + 500 119384819 - Pden_2087 - hypothetical protein 2063 60.01 -1 2089105..2091972 + 955 119384820 - Pden_2088 - endonuclease 2064 62.49 0 2091956..2092960 + 334 119384821 - Pden_2089 - hypothetical protein 2065 58.46 -1 2092962..2094764 + 600 119384822 - Pden_2090 - hypothetical protein 2066 52.99 -2 2094772..2095239 + 155 119384823 - Pden_2091 - hypothetical protein 2067 62.57 0 2095223..2095783 - 186 119384824 - Pden_2092 - transposase, IS4 family protein 2068 71.51 +1 2096063..2097922 + 619 119384825 - Pden_2093 - 3-deoxy-D-manno-octulosonic-acid transferase-like 2069 72.73 +1 2097919..2098908 + 329 119384826 - Pden_2094 - tetraacyldisaccharide 4'-kinase 2070 63.54 0 2098948..2099619 - 223 119384827 - Pden_2095 - DSBA oxidoreductase 2071 69.98 0 2099616..2100158 - 180 119384828 - Pden_2096 - hypothetical protein 2072 70.72 0 2100310..2101296 + 328 119384829 - Pden_2097 - HhH-GPD family protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0