version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1914 62.25 -1 1937038..1938714 + 558 119384671 - Pden_1938 - cytochrome-c oxidase 1915 68.69 0 1938734..1939228 + 164 119384672 - Pden_1939 - hypothetical protein 1916 66.31 0 1939823..1942315 - 830 119384673 - Pden_1940 - FAD dependent oxidoreductase 1917 68.05 0 1942478..1943488 - 336 119384674 - Pden_1941 - glyoxylate reductase 1918 69.98 0 1943580..1944182 + 200 119384675 - Pden_1942 - hypothetical protein 1919 61.54 -1 1944200..1945057 - 285 119384676 - Pden_1943 - hypothetical protein 1920 68.19 0 1945211..1947247 - 678 119384677 - Pden_1944 - peptidyl-dipeptidase Dcp 1921 71.79 +1 1947281..1948333 - 350 119384678 - Pden_1945 - UBA/THIF-type NAD/FAD binding protein 1922 71.21 +1 1948338..1948799 - 153 119384679 - Pden_1946 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 1923 65.41 0 1950168..1951043 + 291 119384680 - Pden_1948 - hypothetical protein 1924 69.61 0 1951059..1952348 - 429 119384681 - Pden_1949 - putative L-sorbosone dehydrogenase 1925 68.79 0 1952489..1954090 - 533 119384682 pgi Pden_1950 - glucose-6-phosphate isomerase 1926 68.00 0 1954092..1954766 - 224 119384683 - Pden_1951 - 6-phosphogluconolactonase 1927 65.87 0 1954763..1956265 - 500 119384684 - Pden_1952 - glucose-6-phosphate 1-dehydrogenase 1928 71.55 +1 1956291..1956884 - 197 119384685 - Pden_1953 - hypothetical protein 1929 70.34 0 1956881..1958077 - 398 119384686 - Pden_1954 - SAM-dependent methyltransferase 1930 69.00 0 1958193..1959995 + 600 119384687 - Pden_1955 - phosphogluconate dehydratase 1931 66.67 0 1960034..1960564 - 176 119384688 - Pden_1956 - putative PAS/PAC sensor protein 1932 61.22 -1 1960643..1961101 - 152 119384689 - Pden_1957 - protein tyrosine phosphatase 1933 65.44 0 1961105..1961593 - 162 119384690 - Pden_1958 - hypothetical protein 1934 69.49 0 1961590..1962900 - 436 119384691 hisD Pden_1959 - histidinol dehydrogenase 1935 68.75 0 1963111..1963590 - 159 119384692 - Pden_1960 - hypothetical protein 1936 68.70 0 1963583..1964863 - 426 119384693 - Pden_1961 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1937 64.29 0 1965483..1965734 + 83 119384694 - Pden_1962 - hypothetical protein 1938 59.00 -1 1965805..1966104 - 99 119384695 - Pden_1963 - XRE family plasmid maintenance system antidote protein 1939 59.80 -1 1966566..1967483 - 305 119384696 - Pden_1964 - hypothetical protein 1940 60.83 -1 1967473..1968294 - 273 119384697 - Pden_1965 - hypothetical protein 1941 57.91 -2 1968478..1968774 - 98 119384698 - Pden_1966 - hypothetical protein 1942 60.93 -1 1968801..1969079 + 92 119384699 - Pden_1967 - hypothetical protein 1943 55.68 -2 1969222..1969740 - 172 119384700 - Pden_1968 - hypothetical protein 1944 52.89 -2 1969844..1970968 - 374 119384701 - Pden_1969 - hypothetical protein 1945 57.56 -2 1970958..1971539 - 193 119384702 - Pden_1970 - putative pancortin-3 1946 61.17 -1 1971910..1972491 + 193 119384703 - Pden_1971 - hypothetical protein 1947 64.94 0 1972763..1974499 + 578 119384704 - Pden_1972 - recombinase 1948 54.52 -2 1979926..1980246 + 106 119384705 - Pden_1973 - hypothetical protein 1949 64.52 0 1980668..1980853 + 61 119384706 - Pden_1974 - Mu-like prophage major head subunit gpT 1950 63.14 0 1980891..1981145 - 84 119384707 - Pden_1975 - hypothetical protein 1951 69.67 0 1981241..1981540 + 99 119384708 - Pden_1976 - hypothetical protein 1952 62.28 -1 1981544..1981885 + 113 119384709 - Pden_1977 - hypothetical protein 1953 67.45 0 1982268..1983287 + 339 119384710 - Pden_1978 - periplasmic binding protein/LacI transcriptional regulator 1954 67.15 0 1983453..1984283 - 276 119384711 - Pden_1979 - methionine aminopeptidase, type I 1955 68.42 0 1984370..1985110 + 246 119384712 - Pden_1980 - molybdopterin binding domain-containing protein 1956 73.61 +1 1985107..1985826 + 239 119384713 - Pden_1981 - GCN5-related N-acetyltransferase 1957 71.58 +1 1985841..1986227 - 128 119384714 - Pden_1982 - hypothetical protein 1958 68.41 0 1986242..1987042 - 266 119384715 - Pden_1983 - hypothetical protein 1959 68.74 0 1987039..1988772 - 577 119384716 - Pden_1984 - dihydroxy-acid dehydratase 1960 68.52 0 1988851..1989174 - 107 119384717 - Pden_1985 - transcriptional coactivator/pterin dehydratase 1961 67.79 0 1989186..1990613 - 475 119384718 - Pden_1986 - phospholipase D/transphosphatidylase 1962 66.56 0 1990702..1991643 + 313 119384719 - Pden_1987 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1963 70.69 0 1991660..1992928 + 422 119384720 - Pden_1988 - FolC bifunctional protein 1964 68.29 0 1992946..1994052 - 368 119384721 - Pden_1989 - AFG1 family ATPase 1965 69.14 0 1994137..1994742 - 201 119384722 - Pden_1990 - hypothetical protein 1966 71.37 +1 1994943..1996325 + 460 119384723 - Pden_1991 - aldehyde dehydrogenase 1967 69.41 0 1996322..1997632 - 436 119384724 - Pden_1992 - major facilitator transporter 1968 68.59 0 1997908..1999521 + 537 119384725 - Pden_1993 - hypothetical protein 1969 65.52 0 1999629..2000324 - 231 119384726 - Pden_1994 - hypothetical protein 1970 68.90 0 2000815..2002605 - 596 119384727 - Pden_1995 - HemY domain-containing protein 1971 73.09 +1 2002568..2004139 - 523 119384728 - Pden_1996 - hypothetical protein 1972 75.26 +2 2004193..2004867 - 224 119384729 - Pden_1997 - putative uroporphyrinogen-III synthase 1973 72.46 +1 2004932..2006002 + 356 119384730 - Pden_1998 - metalloendopeptidase glycoprotease family 1974 71.64 +1 2005999..2006943 + 314 119384731 - Pden_1999 - glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 1975 64.49 0 2006940..2007215 + 91 119384732 - Pden_2000 - YCII-related 1976 64.79 0 2007215..2007640 + 141 119384733 - Pden_2001 - hypothetical protein 1977 67.78 0 2007683..2009476 + 597 119384734 - Pden_2002 - lipid ABC transporter ATPase/inner membrane protein 1978 67.14 0 2009604..2010026 - 140 119384735 - Pden_2003 - Allergen V5/Tpx-1 family protein 1979 63.79 0 2010277..2010762 + 161 119384736 - Pden_2004 - hypothetical protein 1980 66.83 0 2010891..2012780 + 629 119384737 - Pden_2005 - acyl-CoA synthetase 1981 56.27 -2 2012982..2014001 + 339 119384738 - Pden_2006 - hypothetical protein 1982 56.35 -2 2014058..2015065 + 335 119384739 - Pden_2007 - hypothetical protein 1983 62.80 0 2015124..2016779 - 551 119384740 - Pden_2008 - putative ABC transporter ATP-binding protein 1984 63.64 0 2016852..2017709 - 285 119384741 - Pden_2009 - sulfotransferase 1985 67.03 0 2017786..2019177 - 463 119384742 - Pden_2010 - MiaB-like tRNA modifying enzyme YliG 1986 64.33 0 2019275..2019745 + 156 119384743 - Pden_2011 - hypothetical protein 1987 67.18 0 2019730..2020119 + 129 119384744 - Pden_2012 - hypothetical protein 1988 63.91 0 2020124..2020885 - 253 119384745 - Pden_2013 - ABC-2 type transporter 1989 66.88 0 2020882..2021811 - 309 119384746 - Pden_2014 - ABC transporter related 1990 70.63 0 2021929..2022711 - 260 119384747 - Pden_2015 - phospholipid/glycerol acyltransferase 1991 71.83 +1 2022711..2023640 - 309 119384748 - Pden_2016 - hypothetical protein 1992 66.81 0 2023637..2024311 - 224 119384749 - Pden_2017 - ABC transporter related 1993 71.67 +1 2024436..2025395 + 319 119384750 - Pden_2018 - Zinc finger-domain-containing protein 1994 72.73 +1 2025475..2027979 - 834 119384751 - Pden_2019 - hypothetical protein 1995 66.98 0 2028070..2029335 - 421 119384752 - Pden_2020 - diaminopimelate decarboxylase 1996 69.20 0 2029335..2029610 - 91 119384753 - Pden_2021 - hypothetical protein 1997 67.45 0 2029755..2031164 - 469 119384754 - Pden_2022 - argininosuccinate lyase 1998 70.78 0 2031256..2031741 + 161 119384755 - Pden_2023 - redoxin domain-containing protein 1999 65.47 0 2031719..2032303 - 194 119384756 - Pden_2024 - DNA-3-methyladenine glycosylase I 2000 64.13 0 2032396..2033223 + 275 119384757 - Pden_2025 - diguanylate phosphodiesterase 2001 68.45 0 2033477..2034652 + 391 119384758 - Pden_2026 - acetyl-CoA acetyltransferase 2002 63.91 0 2034739..2035464 + 241 119384759 - Pden_2027 - acetoacetyl-CoA reductase 2003 54.79 -2 2035563..2035781 - 72 119384760 - Pden_2028 - hypothetical protein 2004 71.54 +1 2035786..2036544 - 252 119384761 - Pden_2029 - methyltransferase small 2005 64.79 0 2036537..2036749 - 70 119384762 - Pden_2030 - hypothetical protein 2006 68.86 0 2036825..2037826 + 333 119384763 - Pden_2031 - trans-hexaprenyltranstransferase 2007 66.25 0 2037929..2039377 - 482 119384764 - Pden_2032 - ammonium transporter 2008 68.90 0 2039634..2041964 + 776 119384765 - Pden_2033 - 1A family penicillin-binding protein 2009 66.34 0 2042017..2042622 - 201 119384766 - Pden_2034 - toluene tolerance family protein 2010 65.43 0 2042603..2043328 - 241 119384767 - Pden_2035 - VacJ family lipoprotein 2011 69.99 0 2043489..2045231 + 580 119384768 - Pden_2036 - type I secretion system ATPase 2012 68.76 0 2045228..2046661 + 477 119384769 - Pden_2037 - HlyD family type I secretion membrane fusion protein 2013 66.67 0 2046692..2046952 + 86 119384770 - Pden_2038 - hypothetical protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0