version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1863 62.79 0 1887211..1887597 - 128 119384620 - Pden_1885 - hypothetical protein 1864 71.27 +1 1887757..1888473 + 238 119384621 - Pden_1886 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1865 69.55 0 1888501..1889262 + 253 119384622 - Pden_1887 - imidazole glycerol phosphate synthase subunit HisF 1866 64.83 0 1889259..1889585 + 108 119384623 hisE Pden_1888 - phosphoribosyl-ATP pyrophosphatase 1867 69.66 0 1889590..1890090 + 166 119384624 - Pden_1889 - MgtC/SapB transporter 1868 68.99 0 1890087..1891292 - 401 119384625 - Pden_1890 - ribonuclease D 1869 67.72 0 1891381..1892523 - 380 119384626 - Pden_1891 - queuine tRNA-ribosyltransferase 1870 66.40 0 1892555..1893310 - 251 119384627 - Pden_1892 - putative hemolysin 1871 66.67 0 1893409..1893801 + 130 119384628 - Pden_1893 - methionine-R-sulfoxide reductase 1872 67.54 0 1893837..1894292 - 151 119384629 - Pden_1894 - hypothetical protein 1873 70.45 0 1894407..1894934 + 175 119384630 - Pden_1895 - hypothetical protein 1874 66.79 0 1894936..1896588 - 550 119384631 - Pden_1896 - choline dehydrogenase 1875 70.26 0 1896670..1898115 - 481 119384632 - Pden_1897 - betaine aldehyde dehydrogenase 1876 69.30 0 1898112..1898681 - 189 119384633 - Pden_1898 - transcriptional regulator BetI 1877 66.35 0 1898812..1899765 + 317 119384634 - Pden_1899 - substrate-binding region of ABC-type glycine betaine transport system 1878 65.26 0 1899930..1900781 + 283 119384635 - Pden_1900 - binding-protein-dependent transport systems inner membrane component 1879 68.18 0 1900774..1901832 + 352 119384636 - Pden_1901 - ABC transporter related 1880 70.55 0 1901854..1902780 - 308 119384637 - Pden_1902 - hypothetical protein 1881 70.83 +1 1902808..1903407 - 199 119384638 - Pden_1903 - lysine exporter protein LysE/YggA 1882 72.07 +1 1903489..1904358 + 289 119384639 - Pden_1904 - chromosome replication initiation inhibitor protein 1883 61.27 -1 1904398..1905138 - 246 119384640 - Pden_1905 - hypothetical protein 1884 70.65 0 1905203..1905478 - 91 119384641 - Pden_1906 - hypothetical protein 1885 68.10 0 1905465..1905674 - 69 119384642 - Pden_1907 - hypothetical protein 1886 65.16 0 1905677..1907074 - 465 119384643 fumC Pden_1908 - fumarate hydratase 1887 62.12 -1 1907167..1907628 - 153 119384644 - Pden_1909 - hypothetical protein 1888 63.03 0 1908117..1908446 - 109 119384645 - Pden_1911 - hypothetical protein 1889 74.50 +1 1909112..1910221 - 369 119384646 anmK Pden_1912 - anhydro-N-acetylmuramic acid kinase 1890 64.10 0 1910277..1911521 + 414 119384647 - Pden_1913 - tyrosyl-tRNA synthetase 1891 64.43 0 1911566..1912147 - 193 119384648 - Pden_1914 - hypothetical protein 1892 73.03 +1 1912182..1912637 - 151 119384649 - Pden_1915 - hypothetical protein 1893 67.17 0 1912702..1913295 - 197 119384650 - Pden_1916 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 1894 64.31 0 1913285..1913794 - 169 119384651 - Pden_1917 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 1895 68.25 0 1913972..1915168 + 398 119384652 pgk Pden_1918 - phosphoglycerate kinase 1896 64.35 0 1915409..1915624 - 71 119384653 - Pden_1919 - hypothetical protein 1897 65.91 0 1915751..1916680 + 309 119384654 - Pden_1920 - fructose-bisphosphate aldolase 1898 68.11 0 1916810..1917850 + 346 119384655 - Pden_1921 - signal recognition particle-docking protein FtsY 1899 65.85 0 1917907..1918275 - 122 119384656 - Pden_1922 - hypothetical protein 1900 68.88 0 1918330..1919007 - 225 119384657 hisG Pden_1923 - ATP phosphoribosyltransferase catalytic subunit 1901 70.08 0 1919004..1920086 - 360 119384658 hisZ Pden_1924 - ATP phosphoribosyltransferase regulatory subunit 1902 68.42 0 1920083..1921567 - 494 119384659 hisS Pden_1925 - histidyl-tRNA synthetase 1903 68.06 0 1921616..1921831 + 71 119384660 - Pden_1926 - hypothetical protein 1904 73.17 +1 1921901..1922392 - 163 119384661 - Pden_1927 - hypothetical protein 1905 65.29 0 1922493..1923002 - 169 119384662 - Pden_1928 - cell wall hydrolase, SleB 1906 65.74 0 1923126..1924640 - 504 119384663 gatB Pden_1929 - aspartyl/glutamyl-tRNA amidotransferase subunit B 1907 73.72 +1 1925055..1928345 - 1096 119384664 - Pden_1931 - hypothetical protein 1908 71.04 +1 1928360..1929205 + 281 119384665 - Pden_1932 - hypothetical protein 1909 65.81 0 1929274..1930560 - 428 119384666 - Pden_1933 - O-acetylhomoserine/O-acetylserine sulfhydrylase 1910 65.35 0 1930887..1931267 - 126 119384667 - Pden_1934 - translation initiation factor 2, gamma subunit, GTPase 1911 66.29 0 1931703..1935455 - 1250 119384668 metH Pden_1935 - B12-dependent methionine synthase 1912 69.10 0 1935600..1936256 + 218 119384669 lipB Pden_1936 - lipoyltransferase 1913 63.46 0 1936399..1936866 + 155 119384670 - Pden_1937 - cytochrome c, class I 1914 62.25 -1 1937038..1938714 + 558 119384671 - Pden_1938 - cytochrome-c oxidase 1915 68.69 0 1938734..1939228 + 164 119384672 - Pden_1939 - hypothetical protein 1916 66.31 0 1939823..1942315 - 830 119384673 - Pden_1940 - FAD dependent oxidoreductase 1917 68.05 0 1942478..1943488 - 336 119384674 - Pden_1941 - glyoxylate reductase 1918 69.98 0 1943580..1944182 + 200 119384675 - Pden_1942 - hypothetical protein 1919 61.54 -1 1944200..1945057 - 285 119384676 - Pden_1943 - hypothetical protein 1920 68.19 0 1945211..1947247 - 678 119384677 - Pden_1944 - peptidyl-dipeptidase Dcp 1921 71.79 +1 1947281..1948333 - 350 119384678 - Pden_1945 - UBA/THIF-type NAD/FAD binding protein 1922 71.21 +1 1948338..1948799 - 153 119384679 - Pden_1946 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 1923 65.41 0 1950168..1951043 + 291 119384680 - Pden_1948 - hypothetical protein 1924 69.61 0 1951059..1952348 - 429 119384681 - Pden_1949 - putative L-sorbosone dehydrogenase 1925 68.79 0 1952489..1954090 - 533 119384682 pgi Pden_1950 - glucose-6-phosphate isomerase 1926 68.00 0 1954092..1954766 - 224 119384683 - Pden_1951 - 6-phosphogluconolactonase 1927 65.87 0 1954763..1956265 - 500 119384684 - Pden_1952 - glucose-6-phosphate 1-dehydrogenase 1928 71.55 +1 1956291..1956884 - 197 119384685 - Pden_1953 - hypothetical protein 1929 70.34 0 1956881..1958077 - 398 119384686 - Pden_1954 - SAM-dependent methyltransferase 1930 69.00 0 1958193..1959995 + 600 119384687 - Pden_1955 - phosphogluconate dehydratase 1931 66.67 0 1960034..1960564 - 176 119384688 - Pden_1956 - putative PAS/PAC sensor protein 1932 61.22 -1 1960643..1961101 - 152 119384689 - Pden_1957 - protein tyrosine phosphatase 1933 65.44 0 1961105..1961593 - 162 119384690 - Pden_1958 - hypothetical protein 1934 69.49 0 1961590..1962900 - 436 119384691 hisD Pden_1959 - histidinol dehydrogenase 1935 68.75 0 1963111..1963590 - 159 119384692 - Pden_1960 - hypothetical protein 1936 68.70 0 1963583..1964863 - 426 119384693 - Pden_1961 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1937 64.29 0 1965483..1965734 + 83 119384694 - Pden_1962 - hypothetical protein 1938 59.00 -1 1965805..1966104 - 99 119384695 - Pden_1963 - XRE family plasmid maintenance system antidote protein 1939 59.80 -1 1966566..1967483 - 305 119384696 - Pden_1964 - hypothetical protein 1940 60.83 -1 1967473..1968294 - 273 119384697 - Pden_1965 - hypothetical protein 1941 57.91 -2 1968478..1968774 - 98 119384698 - Pden_1966 - hypothetical protein 1942 60.93 -1 1968801..1969079 + 92 119384699 - Pden_1967 - hypothetical protein 1943 55.68 -2 1969222..1969740 - 172 119384700 - Pden_1968 - hypothetical protein 1944 52.89 -2 1969844..1970968 - 374 119384701 - Pden_1969 - hypothetical protein 1945 57.56 -2 1970958..1971539 - 193 119384702 - Pden_1970 - putative pancortin-3 1946 61.17 -1 1971910..1972491 + 193 119384703 - Pden_1971 - hypothetical protein 1947 64.94 0 1972763..1974499 + 578 119384704 - Pden_1972 - recombinase 1948 54.52 -2 1979926..1980246 + 106 119384705 - Pden_1973 - hypothetical protein 1949 64.52 0 1980668..1980853 + 61 119384706 - Pden_1974 - Mu-like prophage major head subunit gpT 1950 63.14 0 1980891..1981145 - 84 119384707 - Pden_1975 - hypothetical protein 1951 69.67 0 1981241..1981540 + 99 119384708 - Pden_1976 - hypothetical protein 1952 62.28 -1 1981544..1981885 + 113 119384709 - Pden_1977 - hypothetical protein 1953 67.45 0 1982268..1983287 + 339 119384710 - Pden_1978 - periplasmic binding protein/LacI transcriptional regulator 1954 67.15 0 1983453..1984283 - 276 119384711 - Pden_1979 - methionine aminopeptidase, type I 1955 68.42 0 1984370..1985110 + 246 119384712 - Pden_1980 - molybdopterin binding domain-containing protein 1956 73.61 +1 1985107..1985826 + 239 119384713 - Pden_1981 - GCN5-related N-acetyltransferase 1957 71.58 +1 1985841..1986227 - 128 119384714 - Pden_1982 - hypothetical protein 1958 68.41 0 1986242..1987042 - 266 119384715 - Pden_1983 - hypothetical protein 1959 68.74 0 1987039..1988772 - 577 119384716 - Pden_1984 - dihydroxy-acid dehydratase 1960 68.52 0 1988851..1989174 - 107 119384717 - Pden_1985 - transcriptional coactivator/pterin dehydratase 1961 67.79 0 1989186..1990613 - 475 119384718 - Pden_1986 - phospholipase D/transphosphatidylase 1962 66.56 0 1990702..1991643 + 313 119384719 - Pden_1987 - acetyl-CoA carboxylase, carboxyl transferase, beta subunit 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0