version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1741 61.86 -1 1747542..1748414 + 290 119384498 - Pden_1761 - hypothetical protein 1742 66.98 0 1748469..1751939 - 1156 119384499 dnaE Pden_1762 - DNA polymerase III subunit alpha 1743 71.68 +1 1752032..1753546 + 504 119384500 - Pden_1763 - ABC transporter related 1744 69.47 0 1753533..1754603 + 356 119384501 - Pden_1764 - inner-membrane translocator 1745 70.03 0 1754600..1755490 + 296 119384502 - Pden_1765 - inner-membrane translocator 1746 65.00 0 1755514..1756590 + 358 119384503 - Pden_1766 - basic membrane lipoprotein 1747 64.77 0 1756646..1757119 - 157 119384504 - Pden_1767 - Ferritin, Dps family protein 1748 57.69 -2 1757265..1757498 - 77 119384505 acpP Pden_1768 - acyl carrier protein 1749 68.56 0 1757635..1758372 - 245 119384506 - Pden_1769 - 3-oxoacyl-(acyl-carrier-protein) reductase 1750 71.31 +1 1758436..1759362 - 308 119384507 - Pden_1770 - malonyl CoA-acyl carrier protein transacylase 1751 71.15 +1 1759435..1760772 - 445 119384508 - Pden_1771 - integral membrane sensor signal transduction histidine kinase 1752 71.28 +1 1760831..1761697 + 288 119384509 - Pden_1772 - beta-lactamase domain-containing protein 1753 70.23 0 1762154..1763218 - 354 119384510 - Pden_1773 - siderophore-interacting protein 1754 70.51 0 1763222..1764313 - 363 119384511 - Pden_1774 - periplasmic binding protein 1755 66.94 0 1764315..1766480 - 721 119384512 - Pden_1775 - TonB-dependent siderophore receptor 1756 72.22 +1 1766649..1767638 + 329 119384513 - Pden_1776 - helix-turn-helix domain-containing protein 1757 68.20 0 1767766..1769595 + 609 119384514 - Pden_1777 - citrate transporter 1758 67.74 0 1769921..1771135 - 404 119384515 - Pden_1778 - Bcr/CflA subfamily drug resistance transporter 1759 72.58 +1 1771246..1771668 + 140 119384516 - Pden_1779 - hypothetical protein 1760 72.42 +1 1772014..1773369 + 451 119384517 - Pden_1780 - RND family efflux transporter MFP subunit 1761 66.47 0 1773407..1775482 + 691 119384518 - Pden_1781 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 1762 69.06 0 1775454..1776539 + 361 119384519 - Pden_1782 - cation efflux transporter 1763 74.48 +1 1776681..1778087 + 468 119384520 - Pden_1783 - integral membrane sensor signal transduction histidine kinase 1764 71.41 +1 1778084..1778758 + 224 119384521 - Pden_1784 - two component LuxR family transcriptional regulator 1765 74.59 +1 1778762..1780048 + 428 119384522 - Pden_1785 - helix-turn-helix domain-containing protein 1766 69.97 0 1780107..1780469 + 120 119384523 - Pden_1786 - response regulator receiver protein 1767 69.55 0 1780478..1780720 + 80 119384524 - Pden_1787 - hypothetical protein 1768 69.90 0 1780710..1783367 + 885 119384525 - Pden_1788 - integral membrane sensor signal transduction histidine kinase 1769 72.35 +1 1783427..1784605 + 392 119384526 - Pden_1789 - surface presentation of antigens (SPOA) protein 1770 55.25 -2 1784790..1785008 + 72 119384527 infA Pden_1790 - translation initiation factor IF-1 1771 69.16 0 1785037..1785678 + 213 119384528 - Pden_1791 - maf protein 1772 72.13 +1 1785675..1786736 + 353 119384529 - Pden_1792 - ribonuclease 1773 68.67 0 1786733..1786882 + 49 119384530 - Pden_1793 - hypothetical protein 1774 64.56 0 1787121..1787453 - 110 119384531 - Pden_1794 - hypothetical protein 1775 64.38 0 1787522..1788787 - 421 119384532 - Pden_1795 - Allergen V5/Tpx-1 family protein 1776 66.67 0 1789095..1789577 - 160 119384533 - Pden_1796 - GCN5-related N-acetyltransferase 1777 69.98 0 1789856..1790971 + 371 119384534 - Pden_1797 - sulfate ABC transporter, ATPase subunit 1778 64.86 0 1790968..1791966 + 332 119384535 - Pden_1798 - sulfate ABC transporter, periplasmic sulfate-binding protein 1779 69.62 0 1791963..1792808 + 281 119384536 - Pden_1799 - sulfate ABC transporter, inner membrane subunit CysT 1780 67.27 0 1792805..1793632 + 275 119384537 - Pden_1800 - sulfate ABC transporter, inner membrane subunit CysW 1781 71.90 +1 1793695..1794420 + 241 119384538 - Pden_1801 - heat shock protein DnaJ domain-containing protein 1782 69.96 0 1794477..1794962 + 161 119384539 - Pden_1802 - hypothetical protein 1783 66.42 0 1794959..1796176 - 405 119384540 - Pden_1803 - glycosyl transferase, group 1 1784 67.22 0 1796176..1797789 - 537 119384541 - Pden_1804 - ABC transporter related 1785 64.68 0 1797786..1798892 - 368 119384542 - Pden_1805 - binding-protein-dependent transport systems inner membrane component 1786 62.46 0 1798892..1800031 - 379 119384543 - Pden_1806 - binding-protein-dependent transport systems inner membrane component 1787 63.06 0 1800075..1802072 - 665 119384544 - Pden_1807 - extracellular solute-binding protein 1788 65.54 0 1802128..1802658 - 176 119384545 - Pden_1808 - cytochrome c, class I 1789 67.79 0 1802822..1803709 + 295 119384546 - Pden_1809 - prephenate dehydratase 1790 68.40 0 1803749..1804210 - 153 119384547 - Pden_1810 - hypothetical protein 1791 71.20 +1 1804328..1806226 + 632 119384548 - Pden_1811 - 5'-nucleotidase domain-containing protein 1792 75.94 +2 1806435..1807340 + 301 119384549 - Pden_1812 - ribokinase-like domain-containing protein 1793 71.80 +1 1807328..1808242 + 304 119384550 - Pden_1813 - indigoidine synthase A family protein 1794 67.71 0 1808239..1809294 - 351 119384551 - Pden_1814 - patatin 1795 65.59 0 1809473..1810681 - 402 119384552 - Pden_1815 - peptide chain release factor 2 1796 66.00 0 1810689..1813226 - 845 119384553 - Pden_1816 - 1A family penicillin-binding protein 1797 71.44 +1 1813297..1814532 - 411 119384554 - Pden_1817 - N-acetylmuramoyl-L-alanine amidase 1798 69.48 0 1814529..1815665 - 378 119384555 - Pden_1818 - aminotransferase, class I and II 1799 66.40 0 1815801..1816553 + 250 119384556 - Pden_1819 - DSBA oxidoreductase 1800 65.07 0 1816643..1817767 - 374 119384557 ispG Pden_1820 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1801 68.39 0 1817894..1819114 - 406 119384558 - Pden_1821 - hypothetical protein 1802 64.24 0 1819224..1820498 - 424 119384559 - Pden_1822 - 5-aminolevulinate synthase 1803 68.47 0 1820623..1822008 + 461 119384560 - Pden_1823 - hypothetical protein 1804 68.92 0 1822158..1822733 + 191 119384561 - Pden_1824 - hypothetical protein 1805 63.92 0 1822871..1823380 - 169 119384562 - Pden_1825 - CarD family transcriptional regulator 1806 57.82 -2 1823834..1824172 - 112 119384563 - Pden_1826 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1807 73.33 +1 1824335..1824604 - 89 119384564 - Pden_1827 - RNA-binding S4 domain-containing protein 1808 68.68 0 1824601..1827528 - 975 119384565 - Pden_1828 - helicase domain-containing protein 1809 70.05 0 1827530..1828267 - 245 119384566 - Pden_1829 - TPR repeat-containing protein 1810 67.37 0 1828317..1828601 + 94 119384567 - Pden_1830 - sterol-binding domain-containing protein 1811 71.96 +1 1828605..1829549 + 314 119384568 - Pden_1831 - alpha/beta hydrolase fold 1812 65.86 0 1829638..1831500 + 620 119384569 - Pden_1832 - pepF/M3 family oligoendopeptidase 1813 68.27 0 1831685..1832866 + 393 119384570 - Pden_1833 - peptidase M19, renal dipeptidase 1814 67.58 0 1832903..1833562 + 219 119384571 - Pden_1834 - glutathione S-transferase domain-containing protein 1815 63.83 0 1833725..1834747 - 340 119384572 - Pden_1835 - hypothetical protein 1816 65.45 0 1834978..1836948 + 656 119384573 - Pden_1836 - DNA topoisomerase IV subunit B 1817 69.05 0 1836945..1837280 + 111 119384574 - Pden_1837 - hypothetical protein 1818 71.83 +1 1837363..1837866 - 167 119384575 - Pden_1838 - phosphoesterase, PA-phosphatase related 1819 69.08 0 1837863..1838525 - 220 119384576 - Pden_1839 - ABC transporter related 1820 65.90 0 1838518..1839819 - 433 119384577 - Pden_1840 - LolC/E family lipoprotein releasing system, transmembrane protein 1821 61.64 -1 1839899..1840057 - 52 119384578 - Pden_1841 - cytochrome oxidase maturation protein, cbb3-type 1822 70.49 0 1840067..1842265 - 732 119384579 - Pden_1842 - heavy metal translocating P-type ATPase 1823 67.74 0 1842267..1842731 - 154 119384580 - Pden_1843 - FixH family protein 1824 65.23 0 1842731..1844188 - 485 119384581 - Pden_1844 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1825 67.81 0 1844464..1845513 - 349 119384582 - Pden_1845 - cytochrome c oxidase, cbb3-type, subunit III 1826 62.43 0 1845513..1845701 - 62 119384583 - Pden_1846 - Cbb3-type cytochrome oxidase component 1827 62.67 0 1845710..1846435 - 241 119384584 - Pden_1847 - cytochrome c oxidase, cbb3-type, subunit II 1828 62.84 0 1846445..1848064 - 539 119384585 - Pden_1848 - cytochrome c oxidase, cbb3-type, subunit I 1829 67.75 0 1848315..1849148 + 277 119384586 - Pden_1849 - UspA domain-containing protein 1830 67.77 0 1849236..1849871 - 211 119384587 - Pden_1850 - CRP/FNR family transcriptional regulator 1831 68.88 0 1850034..1851389 + 451 119384588 - Pden_1851 - coproporphyrinogen III oxidase 1832 69.34 0 1851392..1852327 - 311 119384589 - Pden_1852 - cation diffusion facilitator family transporter 1833 67.34 0 1852399..1855221 - 940 119384590 - Pden_1853 - DNA polymerase I 1834 67.72 0 1855405..1855593 - 62 119384591 - Pden_1854 - hypothetical protein 1835 68.33 0 1855663..1856622 + 319 119384592 - Pden_1855 - ABC transporter related 1836 66.13 0 1856610..1856984 - 124 119384593 - Pden_1856 - histidine triad (HIT) protein 1837 64.40 0 1856995..1858584 - 529 119384594 - Pden_1857 - glycosyl transferase family protein 1838 60.81 -1 1858734..1859552 + 272 119384595 - Pden_1858 - hypothetical protein 1839 66.67 0 1859826..1860032 + 68 119384596 rpmF Pden_1859 - 50S ribosomal protein L32 1840 68.37 0 1860050..1861162 + 370 119384597 - Pden_1860 - putative glycerol-3-phosphate acyltransferase PlsX 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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