version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1668 68.39 0 1670911..1671375 - 154 119384425 - Pden_1688 - hypothetical protein 1669 67.91 0 1671389..1672597 - 402 119384426 - Pden_1689 - nitric oxide dioxygenase 1670 66.67 0 1672723..1673166 + 147 119384427 - Pden_1690 - BadM/Rrf2 family transcriptional regulator 1671 69.77 0 1673173..1674075 - 300 119384428 - Pden_1691 - LysR family transcriptional regulator 1672 65.36 0 1674196..1675422 + 408 119384429 - Pden_1692 - creatinase 1673 65.84 0 1675567..1676901 + 444 119384430 - Pden_1693 - major facilitator transporter 1674 72.04 +1 1676951..1677880 - 309 119384431 - Pden_1694 - LysR family transcriptional regulator 1675 69.08 0 1677976..1678968 + 330 119384432 - Pden_1695 - inositol phosphatase/fructose-1,6-bisphosphatase 1676 62.89 0 1678991..1679863 + 290 119384433 - Pden_1696 - phosphoribulokinase 1677 70.05 0 1679875..1681881 + 668 119384434 - Pden_1697 - transketolase 1678 67.78 0 1681881..1682960 + 359 119384435 - Pden_1698 - fructose-1,6-bisphosphate aldolase 1679 64.28 0 1682975..1684438 + 487 119384436 rbcL Pden_1699 - ribulose bisophosphate carboxylase 1680 60.77 -1 1684450..1684839 + 129 119384437 - Pden_1700 - ribulose-bisphosphate carboxylase 1681 65.80 0 1684912..1685838 + 308 119384438 - Pden_1701 - ATPase central domain-containing protein 1682 75.54 +2 1686315..1687565 - 416 119384439 - Pden_1702 - PimS2 protein 1683 69.66 0 1687776..1689314 + 512 119384440 - Pden_1703 - quinohemoprotein amine dehydrogenase, 60 kDa subunit 1684 66.32 0 1689319..1690776 + 485 119384441 - Pden_1704 - radical SAM domain-containing protein 1685 65.77 0 1690773..1691105 + 110 119384442 - Pden_1705 - hypothetical protein 1686 66.20 0 1691105..1692181 + 358 119384443 - Pden_1706 - quinohemoprotein amine dehydrogenase, subunit beta 1687 76.68 +2 1692183..1692851 + 222 119384444 - Pden_1707 - hypothetical protein 1688 74.16 +1 1692844..1694565 + 573 119384445 - Pden_1708 - ABC transporter related 1689 67.79 0 1694469..1695449 - 326 119384446 - Pden_1709 - Fis family transcriptional regulator 1690 68.23 0 1695772..1697175 + 467 119384447 - Pden_1710 - betaine-aldehyde dehydrogenase 1691 66.50 0 1697230..1697835 - 201 119384448 - Pden_1711 - hypothetical protein 1692 68.84 0 1697832..1699442 - 536 119384449 - Pden_1712 - glucose-methanol-choline oxidoreductase 1693 65.27 0 1699474..1700472 - 332 119384450 - Pden_1713 - inner-membrane translocator 1694 64.75 0 1700474..1701361 - 295 119384451 - Pden_1714 - inner-membrane translocator 1695 67.80 0 1701363..1702067 - 234 119384452 - Pden_1715 - ABC transporter related 1696 69.24 0 1702064..1702840 - 258 119384453 - Pden_1716 - ABC transporter related 1697 65.17 0 1702840..1704039 - 399 119384454 - Pden_1717 - ABC branched-chain amino acid transporter, periplasmic binding protein 1698 67.54 0 1704227..1705144 + 305 119384455 - Pden_1718 - LysR family transcriptional regulator 1699 67.86 0 1705314..1706825 - 503 119384456 - Pden_1719 - malonyl-CoA synthase 1700 69.66 0 1706842..1708212 - 456 119384457 - Pden_1720 - malonyl-CoA decarboxylase 1701 67.46 0 1708247..1709629 - 460 119384458 - Pden_1721 - dicarboxylate carrier MatC domain-containing protein 1702 68.49 0 1709821..1710477 + 218 119384459 - Pden_1722 - GntR family transcriptional regulator 1703 70.32 0 1710559..1711242 + 227 119384460 - Pden_1723 - hypothetical protein 1704 69.02 0 1711267..1712628 + 453 119384461 - Pden_1724 - hypothetical protein 1705 69.38 0 1712600..1713151 - 183 119384462 - Pden_1725 - hypothetical protein 1706 70.13 0 1713148..1713696 - 182 119384463 - Pden_1726 - hypothetical protein 1707 71.40 +1 1713693..1714220 - 175 119384464 - Pden_1727 - hypothetical protein 1708 71.31 +1 1714648..1716132 + 494 119384465 - Pden_1728 - CHAD domain-containing protein 1709 72.65 +1 1716154..1717272 - 372 119384466 - Pden_1729 - alanine dehydrogenase 1710 71.88 +1 1717674..1718153 + 159 119384467 - Pden_1730 - hypothetical protein 1711 70.71 0 1718248..1720026 + 592 119384468 - Pden_1731 - sulfate transporter 1712 65.23 0 1720321..1721295 + 324 119384469 - Pden_1732 - putative glutathione S-transferase 1713 70.60 0 1721402..1722316 + 304 119384470 - Pden_1733 - iron permease FTR1 1714 67.88 0 1722313..1723470 + 385 119384471 - Pden_1734 - hypothetical protein 1715 69.50 0 1723472..1724776 + 434 119384472 - Pden_1735 - Dyp-type peroxidase family protein 1716 64.01 0 1724819..1725646 + 275 119384473 - Pden_1736 - hypothetical protein 1717 67.00 0 1726093..1726992 - 299 119384474 - Pden_1737 - LysR family transcriptional regulator 1718 65.53 0 1727097..1728326 + 409 119384475 - Pden_1738 - creatinase 1719 63.43 0 1728497..1729609 + 370 119384476 - Pden_1739 - ABC polyamine/opine transporter, periplasmic substrate-binding protein 1720 57.61 -2 1729955..1730197 - 80 119384477 - Pden_1740 - hypothetical protein 1721 69.30 0 1730480..1730707 + 75 119384478 - Pden_1741 - hypothetical protein 1722 70.44 0 1730709..1731158 + 149 119384479 - Pden_1742 - D-tyrosyl-tRNA deacylase 1723 68.47 0 1731341..1732780 + 479 119384480 - Pden_1743 - DEAD/DEAH box helicase domain-containing protein 1724 67.01 0 1732864..1733442 + 192 119384481 - Pden_1744 - thymidine kinase 1725 69.29 0 1733439..1734659 + 406 119384482 - Pden_1745 - cytochrome B561 1726 63.83 0 1734782..1735204 - 140 119384483 - Pden_1746 - nucleoside-diphosphate kinase 1727 69.64 0 1735334..1737181 + 615 119384484 - Pden_1747 - ABC transporter related 1728 67.22 0 1737281..1738009 + 242 119384485 - Pden_1748 - MltA-interacting MipA family protein 1729 62.50 0 1738074..1738433 + 119 119384486 - Pden_1749 - hypothetical protein 1730 68.67 0 1738430..1738978 + 182 119384487 - Pden_1750 - hexapaptide repeat-containing transferase 1731 71.93 +1 1738985..1739554 - 189 119384488 - Pden_1751 - phosphoglycerate mutase 1732 69.57 0 1739545..1740405 - 286 119384489 - Pden_1752 - coproporphyrinogen III oxidase 1733 64.63 0 1740461..1740901 + 146 119384490 - Pden_1753 - hypothetical protein 1734 68.89 0 1740906..1741715 - 269 119384491 - Pden_1754 - short-chain dehydrogenase/reductase SDR 1735 71.01 +1 1741712..1742746 - 344 119384492 - Pden_1755 - methyltransferase small 1736 60.06 -1 1742750..1743067 - 105 119384493 - Pden_1756 - ATP-dependent Clp protease adaptor protein ClpS 1737 69.19 0 1743278..1744984 + 568 119384494 - Pden_1757 - Serine-type D-Ala-D-Ala carboxypeptidase 1738 70.13 0 1745177..1745638 - 153 119384495 - Pden_1758 - AsnC family transcriptional regulator 1739 65.57 0 1745635..1746090 - 151 119384496 - Pden_1759 - AsnC family transcriptional regulator 1740 63.44 0 1746218..1747240 + 340 119384497 - Pden_1760 - ketol-acid reductoisomerase 1741 61.86 -1 1747542..1748414 + 290 119384498 - Pden_1761 - hypothetical protein 1742 66.98 0 1748469..1751939 - 1156 119384499 dnaE Pden_1762 - DNA polymerase III subunit alpha 1743 71.68 +1 1752032..1753546 + 504 119384500 - Pden_1763 - ABC transporter related 1744 69.47 0 1753533..1754603 + 356 119384501 - Pden_1764 - inner-membrane translocator 1745 70.03 0 1754600..1755490 + 296 119384502 - Pden_1765 - inner-membrane translocator 1746 65.00 0 1755514..1756590 + 358 119384503 - Pden_1766 - basic membrane lipoprotein 1747 64.77 0 1756646..1757119 - 157 119384504 - Pden_1767 - Ferritin, Dps family protein 1748 57.69 -2 1757265..1757498 - 77 119384505 acpP Pden_1768 - acyl carrier protein 1749 68.56 0 1757635..1758372 - 245 119384506 - Pden_1769 - 3-oxoacyl-(acyl-carrier-protein) reductase 1750 71.31 +1 1758436..1759362 - 308 119384507 - Pden_1770 - malonyl CoA-acyl carrier protein transacylase 1751 71.15 +1 1759435..1760772 - 445 119384508 - Pden_1771 - integral membrane sensor signal transduction histidine kinase 1752 71.28 +1 1760831..1761697 + 288 119384509 - Pden_1772 - beta-lactamase domain-containing protein 1753 70.23 0 1762154..1763218 - 354 119384510 - Pden_1773 - siderophore-interacting protein 1754 70.51 0 1763222..1764313 - 363 119384511 - Pden_1774 - periplasmic binding protein 1755 66.94 0 1764315..1766480 - 721 119384512 - Pden_1775 - TonB-dependent siderophore receptor 1756 72.22 +1 1766649..1767638 + 329 119384513 - Pden_1776 - helix-turn-helix domain-containing protein 1757 68.20 0 1767766..1769595 + 609 119384514 - Pden_1777 - citrate transporter 1758 67.74 0 1769921..1771135 - 404 119384515 - Pden_1778 - Bcr/CflA subfamily drug resistance transporter 1759 72.58 +1 1771246..1771668 + 140 119384516 - Pden_1779 - hypothetical protein 1760 72.42 +1 1772014..1773369 + 451 119384517 - Pden_1780 - RND family efflux transporter MFP subunit 1761 66.47 0 1773407..1775482 + 691 119384518 - Pden_1781 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 1762 69.06 0 1775454..1776539 + 361 119384519 - Pden_1782 - cation efflux transporter 1763 74.48 +1 1776681..1778087 + 468 119384520 - Pden_1783 - integral membrane sensor signal transduction histidine kinase 1764 71.41 +1 1778084..1778758 + 224 119384521 - Pden_1784 - two component LuxR family transcriptional regulator 1765 74.59 +1 1778762..1780048 + 428 119384522 - Pden_1785 - helix-turn-helix domain-containing protein 1766 69.97 0 1780107..1780469 + 120 119384523 - Pden_1786 - response regulator receiver protein 1767 69.55 0 1780478..1780720 + 80 119384524 - Pden_1787 - hypothetical protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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