version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 112 49.20 -2 103599..105035 - 478 119382869 - Pden_0112 - hypothetical protein 113 53.67 -2 105698..106597 - 299 119382870 - Pden_0113 - TIR protein 114 61.65 -1 106933..107211 - 92 119382871 - Pden_0114 - SH3 type 3 domain-containing protein 115 62.68 0 107337..108014 - 225 119382872 - Pden_0115 - yecA family protein 116 63.84 0 108141..108776 - 211 119382873 - Pden_0116 - hexapaptide repeat-containing transferase 117 65.27 0 109037..109393 + 118 119382874 - Pden_0117 - hypothetical protein 118 62.71 0 109402..109755 + 117 119382875 - Pden_0118 - hypothetical protein 119 64.27 0 109994..110410 + 138 119382876 - Pden_0119 - hypothetical protein 120 65.93 0 110943..111620 + 225 119382877 - Pden_0120 - DNA methylase N-4/N-6 domain-containing protein 121 69.42 0 111692..111982 + 96 119382878 - Pden_0121 - hypothetical protein 122 60.61 -1 112280..112741 + 153 119382879 - Pden_0122 - hypothetical protein 123 65.21 0 113488..113898 + 136 119382880 - Pden_0123 - single-strand binding protein 124 66.67 0 113876..114208 + 110 119382881 - Pden_0124 - hypothetical protein 125 64.71 0 114444..114647 + 67 119382882 - Pden_0125 - hypothetical protein 126 63.38 0 115048..115260 + 70 119382883 - Pden_0126 - hypothetical protein 127 69.11 0 115281..115730 - 149 119382884 - Pden_0127 - hypothetical protein 128 66.29 0 115825..116091 - 88 119382885 - Pden_0128 - hypothetical protein 129 68.56 0 116238..116501 - 87 119382886 - Pden_0129 - hypothetical protein 130 63.71 0 116687..116923 - 78 119382887 - Pden_0130 - XRE family transcriptional regulator 131 67.41 0 117115..117384 + 89 119382888 - Pden_0131 - hypothetical protein 132 67.36 0 117381..118250 + 289 119382889 - Pden_0132 - putative replication protein A 133 68.06 0 118506..119006 + 166 119382890 - Pden_0133 - hypothetical protein 134 61.85 -1 119003..120622 + 539 119382891 - Pden_0134 - transposase IS116/IS110/IS902 family protein 135 69.73 0 121111..121665 + 184 119382892 - Pden_0135 - hypothetical protein 136 68.06 0 121919..122851 + 310 119382893 - Pden_0136 - hypothetical protein 137 69.40 0 122855..123550 + 231 119382894 - Pden_0137 - lytic transglycosylase, catalytic 138 68.73 0 123600..124181 + 193 119382895 - Pden_0138 - hypothetical protein 139 68.85 0 124423..126159 + 578 119382896 - Pden_0139 - hypothetical protein 140 66.67 0 126242..126493 + 83 119382897 - Pden_0140 - prevent-host-death family protein 141 67.23 0 126578..126934 + 118 119382898 - Pden_0141 - PilT protein-like 142 66.47 0 127107..129131 + 674 119382899 - Pden_0142 - TRAG family protein 143 68.86 0 129135..129545 + 136 119382900 - Pden_0143 - hypothetical protein 144 68.93 0 129586..129894 - 102 119382901 - Pden_0144 - plasmid stabilization system protein 145 64.44 0 129891..130160 - 89 119382902 - Pden_0145 - CopG family transcriptional regulator 146 62.55 0 130357..130599 - 80 119382903 - Pden_0146 - hypothetical protein 147 71.17 +1 130604..131779 - 391 119382904 - Pden_0147 - conjugation TrbI family protein 148 67.46 0 131779..132783 - 334 119382905 - Pden_0148 - conjugal transfer protein TrbG/VirB9/CagX 149 65.51 0 132780..133469 - 229 119382906 - Pden_0149 - conjugal transfer protein 150 68.18 0 133466..134785 - 439 119382907 - Pden_0150 - TrbL/VirB6 plasmid conjugal transfer protein 151 69.44 0 134793..135080 - 95 119382908 - Pden_0151 - hypothetical protein 152 66.79 0 135101..135901 - 266 119382909 - Pden_0152 - conjugal transfer protein TrbJ 153 66.06 0 135898..138516 - 872 119382910 - Pden_0153 - AAA ATPase 154 70.92 +1 138528..138809 - 93 119382911 - Pden_0154 - conjugal transfer protein TrbB 155 63.94 0 138809..139138 - 109 119382912 - Pden_0155 - conjugal transfer protein TrbC 156 68.86 0 139135..140139 - 334 119382913 - Pden_0156 - type II secretion system protein E 157 63.63 0 140328..141215 - 295 119382914 - Pden_0157 - LysR family transcriptional regulator 158 55.41 -2 141246..141467 - 73 119382915 - Pden_0158 - hypothetical protein 159 57.76 -2 141627..141974 - 115 119382916 - Pden_0159 - hypothetical protein 160 67.41 0 142033..145134 - 1033 119382917 - Pden_0160 - acriflavin resistance protein 161 71.30 +1 145138..146280 - 380 119382918 - Pden_0161 - RND family efflux transporter MFP subunit 162 65.49 0 146505..147182 - 225 119382919 - Pden_0162 - MltA-interacting MipA family protein 163 57.30 -2 147265..147627 + 120 119382920 - Pden_0163 - hypothetical protein 164 64.11 0 147614..148240 + 208 119382921 - Pden_0164 - TetR family transcriptional regulator 165 67.84 0 148664..149005 - 113 119382922 - Pden_0166 - regulatory protein, ArsR 166 68.21 0 149251..150348 + 365 119382923 - Pden_0167 - cupin 2 domain-containing protein 167 71.34 +1 150370..151140 + 256 119382924 - Pden_0168 - hypothetical protein 168 69.57 0 151137..151964 - 275 119382925 - Pden_0169 - regulatory proteins, IclR 169 64.18 0 151979..152380 - 133 119382926 - Pden_0170 - thioesterase superfamily protein 170 64.83 0 152463..153608 + 381 119382927 - Pden_0171 - monooxygenase, FAD-binding 171 68.41 0 153619..155283 + 554 119382928 - Pden_0172 - benzoate-CoA ligase family 172 68.64 0 155383..156093 + 236 119382929 - Pden_0173 - fumarylacetoacetate (FAA) hydrolase 173 66.51 0 156090..156743 + 217 119382930 - Pden_0174 - maleylacetoacetate isomerase 174 64.55 0 156769..157950 + 393 119382931 - Pden_0175 - putative ABC transporter binding protein 175 66.02 0 157992..158912 + 306 119382932 - Pden_0176 - inner-membrane translocator 176 65.57 0 158917..159918 + 333 119382933 - Pden_0177 - inner-membrane translocator 177 69.87 0 159915..160664 + 249 119382934 - Pden_0178 - ABC transporter related 178 67.24 0 160664..161365 + 233 119382935 - Pden_0179 - ABC transporter related 179 68.66 0 161423..162874 + 483 119382936 - Pden_0180 - aldehyde dehydrogenase 180 69.29 0 162937..164652 + 571 119382937 - Pden_0181 - glucose-methanol-choline oxidoreductase 181 63.44 0 164730..165875 + 381 119382938 - Pden_0182 - beta-lactamase-like protein 182 68.97 0 165932..167233 - 433 119382939 - Pden_0183 - D-amino acid dehydrogenase small subunit 183 66.38 0 167506..168204 - 232 119382940 - Pden_0184 - hypothetical protein 184 65.58 0 168231..168968 - 245 119382941 - Pden_0185 - hypothetical protein 185 66.41 0 169001..170164 - 387 119382942 - Pden_0186 - amidohydrolase 186 60.52 -1 170313..170816 + 167 119382943 - Pden_0187 - MarR family transcriptional regulator 187 65.07 0 170847..171662 - 271 119382944 - Pden_0188 - regulatory proteins, IclR 188 65.76 0 171675..173552 - 625 119382945 - Pden_0189 - TRAP C4-dicarboxylate transport system permease DctM subunit 189 61.77 -1 173552..174082 - 176 119382946 - Pden_0190 - tripartite ATP-independent periplasmic transporter DctQ 190 57.49 -2 174180..174593 - 137 119382947 - Pden_0191 - glyoxalase/bleomycin resistance protein/dioxygenase 191 69.52 0 174620..175390 - 256 119382948 - Pden_0192 - short-chain dehydrogenase/reductase SDR 192 64.19 0 175536..176624 - 362 119382949 - Pden_0193 - TRAP dicarboxylate transporter- DctP subunit 193 70.67 0 176899..177723 + 274 119382950 - Pden_0194 - hypothetical protein 194 68.91 0 177720..178925 + 401 119382951 - Pden_0195 - L-carnitine dehydratase/bile acid-inducible protein F 195 66.42 0 178909..179730 + 273 119382952 - Pden_0196 - short-chain dehydrogenase/reductase SDR 196 71.31 +1 179751..181280 + 509 119382953 - Pden_0197 - 3-hydroxybutyryl-CoA dehydrogenase 197 67.44 0 181335..182495 - 386 119382954 - Pden_0198 - butyryl-CoA dehydrogenase 198 72.99 +1 183912..185984 - 690 119382955 - Pden_0201 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 199 69.87 0 186326..186856 + 176 119382956 - Pden_0202 - flavin reductase domain-containing protein 200 64.00 0 186916..188004 + 362 119382957 - Pden_0203 - luciferase family protein 201 69.49 0 188036..188707 + 223 119382958 - Pden_0204 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 202 66.67 0 188774..189028 - 84 119382959 - Pden_0205 - hypothetical protein 203 66.67 0 189154..189945 - 263 119382960 - Pden_0206 - short-chain dehydrogenase/reductase SDR 204 64.56 0 190129..191124 - 331 119382961 - Pden_0207 - alpha/beta hydrolase fold 205 58.89 -1 191172..191351 - 59 119382962 - Pden_0208 - 4-oxalocrotonate tautomerase 206 68.98 0 191454..192362 + 302 119382963 - Pden_0209 - LysR family transcriptional regulator 207 63.38 0 192405..193013 - 202 119382964 - Pden_0210 - hypothetical protein 208 64.54 0 193178..193600 - 140 119382965 - Pden_0211 - MerR family transcriptional regulator 209 70.75 0 193651..195927 + 758 119382966 - Pden_0212 - heavy metal translocating P-type ATPase 210 71.19 +1 195927..196523 + 198 119382967 - Pden_0213 - S-isoprenylcysteine methyltransferase-like protein 211 65.55 0 196604..197680 - 358 119382968 - Pden_0214 - arsenical-resistance protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0