version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1483 54.58 -2 1466069..1467028 + 319 119384240 - Pden_1500 - helix-turn-helix domain-containing protein 1484 64.10 0 1467357..1467746 - 129 119384241 - Pden_1501 - hypothetical protein 1485 62.96 0 1467733..1468083 - 116 119384242 - Pden_1502 - hypothetical protein 1486 62.40 0 1468070..1469287 - 405 119384243 - Pden_1503 - hypothetical protein 1487 57.73 -2 1469486..1470022 - 178 119384244 - Pden_1504 - hypothetical protein 1488 62.94 0 1470456..1470884 - 142 119384245 - Pden_1505 - hypothetical protein 1489 63.44 0 1470887..1472872 - 661 119384246 - Pden_1506 - TRAG family protein 1490 68.66 0 1472899..1474653 - 584 119384247 - Pden_1507 - hypothetical protein 1491 67.58 0 1474897..1475661 - 254 119384248 - Pden_1508 - lytic transglycosylase, catalytic 1492 62.20 -1 1475664..1475999 - 111 119384249 - Pden_1509 - hypothetical protein 1493 67.77 0 1476066..1476608 - 180 119384250 - Pden_1510 - conjugal transfer protein precursor 1494 61.30 -1 1476605..1477126 - 173 119384251 - Pden_1511 - hypothetical protein 1495 62.15 -1 1477126..1478298 - 390 119384252 - Pden_1512 - replication protein A 1496 67.73 0 1478317..1478598 - 93 119384253 - Pden_1513 - hypothetical protein 1497 65.15 0 1478736..1479131 - 131 119384254 - Pden_1514 - hypothetical protein 1498 60.56 -1 1479202..1479561 - 119 119384255 - Pden_1515 - hypothetical protein 1499 63.64 0 1479617..1479880 - 87 119384256 - Pden_1516 - hypothetical protein 1500 60.47 -1 1479986..1480243 - 85 119384257 - Pden_1517 - XRE family transcriptional regulator 1501 67.59 0 1480430..1480753 - 107 119384258 - Pden_1518 - hypothetical protein 1502 67.10 0 1480790..1481251 + 153 119384259 - Pden_1519 - hypothetical protein 1503 65.30 0 1481310..1481747 - 145 119384260 - Pden_1520 - hypothetical protein 1504 56.76 -2 1481913..1482437 + 174 119384261 - Pden_1521 - hypothetical protein 1505 66.27 0 1482485..1482733 + 82 119384262 - Pden_1522 - hypothetical protein 1506 59.20 -1 1482702..1483478 - 258 119384263 - Pden_1523 - putative restriction endonuclease 1507 55.66 -2 1483478..1485439 - 653 119384264 - Pden_1524 - putative chromosome segregation SMC protein 1508 61.28 -1 1485429..1489808 - 1459 119384265 - Pden_1525 - hypothetical protein 1509 60.97 -1 1489811..1492582 - 923 119384266 - Pden_1526 - helicase domain-containing protein 1510 59.44 -1 1492584..1497761 - 1725 119384267 - Pden_1527 - DEAD/DEAH box helicase domain-containing protein 1511 61.26 -1 1497762..1499684 - 640 119384268 - Pden_1528 - hypothetical protein 1512 62.27 -1 1499748..1500635 - 295 119384269 - Pden_1529 - hypothetical protein 1513 64.58 0 1501056..1501295 + 79 119384270 - Pden_1530 - hypothetical protein 1514 63.00 0 1501625..1502551 - 308 119384271 - Pden_1531 - hypothetical protein 1515 64.54 0 1502908..1503942 - 344 119384272 - Pden_1532 - hypothetical protein 1516 65.21 0 1503942..1508264 - 1440 119384273 - Pden_1533 - methylase/helicase 1517 64.44 0 1508430..1510043 + 537 119384274 - Pden_1534 - filamentation induced by cAMP protein Fic 1518 60.00 -1 1510055..1510699 - 214 119384275 - Pden_1535 - hypothetical protein 1519 62.35 -1 1510692..1511108 - 138 119384276 - Pden_1536 - hypothetical protein 1520 64.70 0 1511174..1511731 - 185 119384277 - Pden_1537 - hypothetical protein 1521 65.12 0 1511923..1512180 - 85 119384278 - Pden_1538 - hypothetical protein 1522 63.40 0 1512503..1512808 - 101 119384279 - Pden_1539 - hypothetical protein 1523 61.46 -1 1512910..1515234 - 774 119384280 - Pden_1540 - hypothetical protein 1524 66.10 0 1515718..1517844 - 708 119384281 - Pden_1541 - parB-like partition proteins 1525 63.19 0 1517961..1518449 - 162 119384282 - Pden_1542 - DNA repair protein RadC 1526 62.88 0 1518561..1518956 - 131 119384283 - Pden_1543 - hypothetical protein 1527 66.04 0 1518953..1519915 - 320 119384284 - Pden_1544 - hypothetical protein 1528 60.06 -1 1520277..1520594 + 105 119384285 - Pden_1545 - histone family protein nucleoid-structuring protein H-NS 1529 63.27 0 1520610..1521227 + 205 119384286 - Pden_1546 - ORF-3 family protein 1530 66.67 0 1521563..1521871 + 102 119384287 - Pden_1547 - XRE family transcriptional regulator 1531 65.62 0 1521861..1523102 + 413 119384288 - Pden_1548 - HipA domain-containing protein 1532 66.67 0 1523662..1523889 + 75 119384289 - Pden_1549 - hypothetical protein 1533 69.60 0 1523870..1524346 - 158 119384290 - Pden_1550 - hypothetical protein 1534 62.32 -1 1524673..1525593 - 306 119384291 - Pden_1551 - hypothetical protein 1535 69.93 0 1526019..1526324 - 101 119384292 - Pden_1552 - hypothetical protein 1536 68.66 0 1526439..1526939 - 166 119384293 - Pden_1553 - NusB antitermination factor 1537 71.20 +1 1526936..1527487 - 183 119384294 - Pden_1554 - 6,7-dimethyl-8-ribityllumazine synthase 1538 68.36 0 1527492..1528610 - 372 119384295 - Pden_1555 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 1539 71.50 +1 1528600..1529178 - 192 119384296 - Pden_1556 - hypothetical protein 1540 68.52 0 1529178..1529771 - 197 119384297 - Pden_1557 - riboflavin synthase subunit alpha 1541 67.50 0 1530081..1531403 + 440 119384298 - Pden_1558 - capsule polysaccharide biosynthesis 1542 66.58 0 1531502..1532680 + 392 119384299 - Pden_1559 - polysaccharide export protein 1543 71.94 +1 1532685..1534676 + 663 119384300 - Pden_1560 - capsule polysaccharide biosynthesis 1544 74.34 +1 1534673..1535650 - 325 119384301 - Pden_1561 - riboflavin biosynthesis protein RibD 1545 63.66 0 1535665..1536129 - 154 119384302 - Pden_1562 - transcriptional regulator NrdR 1546 63.82 0 1536368..1537492 + 374 119384303 - Pden_1563 - TRAP dicarboxylate transporter- DctP subunit 1547 66.93 0 1537598..1539490 - 630 119384304 - Pden_1564 - TRAP dicarboxylate transporter, DctM subunit 1548 61.22 -1 1539487..1540110 - 207 119384305 - Pden_1565 - tripartite ATP-independent periplasmic transporter DctQ 1549 77.99 +2 1540248..1541015 - 255 119384306 - Pden_1566 - cobalamin 5'-phosphate synthase 1550 71.16 +1 1541008..1541964 - 318 119384307 - Pden_1567 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1551 71.54 +1 1541961..1542494 - 177 119384308 - Pden_1568 - adenosylcobinamide kinase 1552 62.18 -1 1542634..1544238 + 534 119384309 - Pden_1569 - extracellular solute-binding protein 1553 66.12 0 1544305..1545222 + 305 119384310 - Pden_1570 - binding-protein-dependent transport systems inner membrane component 1554 65.48 0 1545226..1546149 + 307 119384311 - Pden_1571 - binding-protein-dependent transport systems inner membrane component 1555 69.51 0 1546151..1547206 + 351 119384312 - Pden_1572 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1556 67.55 0 1547203..1548216 + 337 119384313 - Pden_1573 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1557 71.19 +1 1548274..1548759 + 161 119384314 - Pden_1574 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1558 64.97 0 1548796..1551090 - 764 119384315 - Pden_1575 - hypothetical protein 1559 64.03 0 1551231..1552823 - 530 119384316 lysK Pden_1576 - lysyl-tRNA synthetase 1560 69.50 0 1552915..1553337 + 140 119384317 - Pden_1577 - hypothetical protein 1561 71.62 +1 1553348..1554802 - 484 119384318 - Pden_1578 - peptidase S13, D-Ala-D-Ala carboxypeptidase C 1562 70.81 +1 1554802..1555404 - 200 119384319 nadD Pden_1579 - nicotinic acid mononucleotide adenylyltransferase 1563 68.82 0 1555408..1557075 - 555 119384320 - Pden_1580 - formate--tetrahydrofolate ligase 1564 66.23 0 1557146..1558279 - 377 119384321 - Pden_1581 - hypothetical protein 1565 69.52 0 1558276..1560450 - 724 119384322 - Pden_1582 - glucosyltransferase MdoH 1566 66.79 0 1560447..1562045 - 532 119384323 mdoG Pden_1583 - glucan biosynthesis protein G 1567 72.82 +1 1562157..1563164 + 335 119384324 - Pden_1584 - hypothetical protein 1568 68.33 0 1563635..1564297 + 220 119384325 - Pden_1585 - two component transcriptional regulator 1569 73.01 +1 1564294..1565634 + 446 119384326 - Pden_1586 - integral membrane sensor signal transduction histidine kinase 1570 68.27 0 1565928..1566239 - 103 119384327 - Pden_1587 - ETC complex I subunit region 1571 65.23 0 1566388..1568613 + 741 119384328 - Pden_1588 - excinuclease ABC subunit B 1572 65.97 0 1568656..1568943 - 95 119384329 - Pden_1589 - hypothetical protein 1573 70.28 0 1569043..1569678 - 211 119384330 - Pden_1590 - cobyrinic acid a,c-diamide synthase 1574 64.51 0 1569781..1570104 - 107 119384331 - Pden_1591 - antibiotic biosynthesis monooxygenase 1575 68.48 0 1570289..1571338 + 349 119384332 - Pden_1592 - peptidase M19, renal dipeptidase 1576 67.83 0 1571549..1573090 - 513 119384333 - Pden_1593 - Ppx/GppA phosphatase 1577 63.75 0 1573159..1574460 - 433 119384334 - Pden_1594 - polyphosphate kinase 1578 68.56 0 1574589..1575380 + 263 119384335 - Pden_1595 - ABC transporter related 1579 69.43 0 1575380..1576246 + 288 119384336 - Pden_1596 - ABC-3 protein 1580 67.42 0 1576266..1577195 + 309 119384337 - Pden_1597 - periplasmic solute binding protein 1581 68.13 0 1577267..1578493 + 408 119384338 - Pden_1598 - hypothetical protein 1582 68.28 0 1578721..1579401 - 226 119384339 - Pden_1599 - glutathione S-transferase domain-containing protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0