version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1424 57.41 -2 1412139..1412408 + 89 119384181 - Pden_1440 - hypothetical protein 1425 59.09 -1 1412411..1412872 + 153 119384182 - Pden_1441 - hypothetical protein 1426 59.04 -1 1412869..1413117 - 82 119384183 - Pden_1442 - hypothetical protein 1427 61.90 -1 1413275..1413652 + 125 119384184 - Pden_1443 - hypothetical protein 1428 64.66 0 1413649..1414047 + 132 119384185 - Pden_1444 - cupin 2 domain-containing protein 1429 57.89 -2 1414120..1414404 + 94 119384186 - Pden_1445 - hypothetical protein 1430 64.11 0 1414397..1415647 + 416 119384187 - Pden_1446 - major facilitator transporter 1431 65.38 0 1415738..1416283 + 181 119384188 - Pden_1447 - PEBP family protein 1432 64.73 0 1416302..1417177 + 291 119384189 - Pden_1448 - PhzF family phenazine biosynthesis protein 1433 62.25 -1 1417178..1417720 - 180 119384190 - Pden_1449 - hypothetical protein 1434 62.86 0 1417876..1418190 - 104 119384191 - Pden_1450 - alpha/beta hydrolase 1435 52.92 -2 1418685..1418975 - 96 119384192 - Pden_1452 - hypothetical protein 1436 56.13 -2 1419245..1420051 + 268 119384193 - Pden_1453 - DNA polymerase, beta-like 1437 60.70 -1 1420288..1421376 + 362 119384194 - Pden_1454 - glutathione S-transferase-like protein 1438 59.71 -1 1421594..1422829 - 411 119384195 - Pden_1455 - major facilitator transporter 1439 59.96 -1 1422907..1423398 + 163 119384196 - Pden_1456 - HxlR family transcriptional regulator 1440 62.06 -1 1423406..1424317 - 303 119384197 - Pden_1457 - alpha/beta hydrolase 1441 59.62 -1 1424485..1425009 + 174 119384198 - Pden_1458 - cupin 2 domain-containing protein 1442 60.43 -1 1425006..1425662 + 218 119384199 - Pden_1459 - DSBA oxidoreductase 1443 61.07 -1 1425659..1426087 + 142 119384200 - Pden_1460 - GCN5-related N-acetyltransferase 1444 60.04 -1 1426069..1426521 - 150 119384201 - Pden_1461 - GCN5-related N-acetyltransferase 1445 55.81 -2 1426766..1427152 + 128 119384202 - Pden_1462 - GCN5-related N-acetyltransferase 1446 59.72 -1 1427197..1428117 - 306 119384203 - Pden_1463 - LysR family transcriptional regulator 1447 63.29 0 1428263..1429180 + 305 119384204 - Pden_1464 - aminotransferase, class IV 1448 70.85 +1 1429171..1429911 - 246 119384205 - Pden_1465 - hypothetical protein 1449 69.93 0 1430186..1430767 + 193 119384206 - Pden_1466 - helix-turn-helix domain-containing protein 1450 64.30 0 1430770..1431402 - 210 119384207 - Pden_1467 - lysine exporter protein LysE/YggA 1451 64.84 0 1431405..1431950 - 181 119384208 - Pden_1468 - hypothetical protein 1452 62.28 -1 1432068..1432523 + 151 119384209 - Pden_1469 - AsnC family transcriptional regulator 1453 63.14 0 1432553..1433176 + 207 119384210 - Pden_1470 - lysine exporter protein LysE/YggA 1454 60.56 -1 1433351..1434349 + 332 119384211 - Pden_1471 - LysR family transcriptional regulator 1455 60.37 -1 1434342..1435595 + 417 119384212 - Pden_1472 - methyltransferase type 12 1456 57.42 -2 1435611..1436129 - 172 119384213 - Pden_1473 - dehydratase 1457 61.97 -1 1436263..1436496 - 77 119384214 - Pden_1474 - hypothetical protein 1458 65.78 0 1436499..1437620 - 373 119384215 - Pden_1475 - conjugation TrbI family protein 1459 66.76 0 1437617..1438645 - 342 119384216 - Pden_1476 - conjugal transfer protein TrbG/VirB9/CagX 1460 65.07 0 1438642..1439331 - 229 119384217 - Pden_1477 - conjugal transfer protein 1461 67.63 0 1439328..1440680 - 450 119384218 - Pden_1478 - TrbL/VirB6 plasmid conjugal transfer protein 1462 69.44 0 1440684..1440971 - 95 119384219 - Pden_1479 - hypothetical protein 1463 64.37 0 1440989..1441771 - 260 119384220 - Pden_1480 - conjugal transfer protein TrbJ 1464 65.23 0 1441768..1444278 - 836 119384221 - Pden_1481 - AAA ATPase 1465 67.69 0 1444285..1444578 - 97 119384222 - Pden_1482 - conjugal transfer protein trbB 1466 64.56 0 1444645..1444977 - 110 119384223 - Pden_1483 - conjugal transfer protein TrbC 1467 66.57 0 1444974..1445972 - 332 119384224 - Pden_1484 - type II secretion system protein E 1468 55.05 -2 1446345..1447265 + 306 119384225 - Pden_1485 - helix-turn-helix domain-containing protein 1469 57.64 -2 1447354..1449435 + 693 119384226 - Pden_1486 - TonB-dependent receptor 1470 60.24 -1 1449435..1450445 + 336 119384227 - Pden_1487 - methyltransferase type 12 1471 63.57 0 1450447..1451349 + 300 119384228 - Pden_1488 - putative sulfonate/nitrate transport system substrate-binding protein 1472 63.80 0 1451349..1452080 + 243 119384229 - Pden_1489 - binding-protein-dependent transport systems inner membrane component 1473 57.56 -2 1452077..1452658 + 193 119384230 - Pden_1490 - ABC transporter related 1474 61.09 -1 1452668..1453366 - 232 119384231 - Pden_1491 - TetR family transcriptional regulator 1475 64.31 0 1453406..1455184 - 592 119384232 - Pden_1492 - ABC transporter related 1476 63.98 0 1455181..1457001 - 606 119384233 - Pden_1493 - ABC transporter related 1477 63.22 0 1457084..1458244 - 386 119384234 - Pden_1494 - monooxygenase, FAD-binding 1478 59.83 -1 1458248..1460236 - 662 119384235 - Pden_1495 - TonB-dependent receptor 1479 61.03 -1 1460233..1461420 - 395 119384236 - Pden_1496 - major facilitator transporter 1480 58.58 -1 1461579..1462580 + 333 119384237 - Pden_1497 - helix-turn-helix domain-containing protein 1481 58.76 -1 1462601..1463827 - 408 119384238 - Pden_1498 - major facilitator transporter 1482 55.28 -2 1463830..1465779 - 649 119384239 - Pden_1499 - TonB-dependent receptor 1483 54.58 -2 1466069..1467028 + 319 119384240 - Pden_1500 - helix-turn-helix domain-containing protein 1484 64.10 0 1467357..1467746 - 129 119384241 - Pden_1501 - hypothetical protein 1485 62.96 0 1467733..1468083 - 116 119384242 - Pden_1502 - hypothetical protein 1486 62.40 0 1468070..1469287 - 405 119384243 - Pden_1503 - hypothetical protein 1487 57.73 -2 1469486..1470022 - 178 119384244 - Pden_1504 - hypothetical protein 1488 62.94 0 1470456..1470884 - 142 119384245 - Pden_1505 - hypothetical protein 1489 63.44 0 1470887..1472872 - 661 119384246 - Pden_1506 - TRAG family protein 1490 68.66 0 1472899..1474653 - 584 119384247 - Pden_1507 - hypothetical protein 1491 67.58 0 1474897..1475661 - 254 119384248 - Pden_1508 - lytic transglycosylase, catalytic 1492 62.20 -1 1475664..1475999 - 111 119384249 - Pden_1509 - hypothetical protein 1493 67.77 0 1476066..1476608 - 180 119384250 - Pden_1510 - conjugal transfer protein precursor 1494 61.30 -1 1476605..1477126 - 173 119384251 - Pden_1511 - hypothetical protein 1495 62.15 -1 1477126..1478298 - 390 119384252 - Pden_1512 - replication protein A 1496 67.73 0 1478317..1478598 - 93 119384253 - Pden_1513 - hypothetical protein 1497 65.15 0 1478736..1479131 - 131 119384254 - Pden_1514 - hypothetical protein 1498 60.56 -1 1479202..1479561 - 119 119384255 - Pden_1515 - hypothetical protein 1499 63.64 0 1479617..1479880 - 87 119384256 - Pden_1516 - hypothetical protein 1500 60.47 -1 1479986..1480243 - 85 119384257 - Pden_1517 - XRE family transcriptional regulator 1501 67.59 0 1480430..1480753 - 107 119384258 - Pden_1518 - hypothetical protein 1502 67.10 0 1480790..1481251 + 153 119384259 - Pden_1519 - hypothetical protein 1503 65.30 0 1481310..1481747 - 145 119384260 - Pden_1520 - hypothetical protein 1504 56.76 -2 1481913..1482437 + 174 119384261 - Pden_1521 - hypothetical protein 1505 66.27 0 1482485..1482733 + 82 119384262 - Pden_1522 - hypothetical protein 1506 59.20 -1 1482702..1483478 - 258 119384263 - Pden_1523 - putative restriction endonuclease 1507 55.66 -2 1483478..1485439 - 653 119384264 - Pden_1524 - putative chromosome segregation SMC protein 1508 61.28 -1 1485429..1489808 - 1459 119384265 - Pden_1525 - hypothetical protein 1509 60.97 -1 1489811..1492582 - 923 119384266 - Pden_1526 - helicase domain-containing protein 1510 59.44 -1 1492584..1497761 - 1725 119384267 - Pden_1527 - DEAD/DEAH box helicase domain-containing protein 1511 61.26 -1 1497762..1499684 - 640 119384268 - Pden_1528 - hypothetical protein 1512 62.27 -1 1499748..1500635 - 295 119384269 - Pden_1529 - hypothetical protein 1513 64.58 0 1501056..1501295 + 79 119384270 - Pden_1530 - hypothetical protein 1514 63.00 0 1501625..1502551 - 308 119384271 - Pden_1531 - hypothetical protein 1515 64.54 0 1502908..1503942 - 344 119384272 - Pden_1532 - hypothetical protein 1516 65.21 0 1503942..1508264 - 1440 119384273 - Pden_1533 - methylase/helicase 1517 64.44 0 1508430..1510043 + 537 119384274 - Pden_1534 - filamentation induced by cAMP protein Fic 1518 60.00 -1 1510055..1510699 - 214 119384275 - Pden_1535 - hypothetical protein 1519 62.35 -1 1510692..1511108 - 138 119384276 - Pden_1536 - hypothetical protein 1520 64.70 0 1511174..1511731 - 185 119384277 - Pden_1537 - hypothetical protein 1521 65.12 0 1511923..1512180 - 85 119384278 - Pden_1538 - hypothetical protein 1522 63.40 0 1512503..1512808 - 101 119384279 - Pden_1539 - hypothetical protein 1523 61.46 -1 1512910..1515234 - 774 119384280 - Pden_1540 - hypothetical protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0