version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1400 66.31 0 1383891..1385555 - 554 119384157 secD Pden_1416 - preprotein translocase subunit SecD 1401 66.67 0 1385572..1385904 - 110 119384158 - Pden_1417 - preprotein translocase, YajC subunit 1402 67.49 0 1386096..1386947 + 283 119384159 mazG Pden_1418 - nucleoside triphosphate pyrophosphohydrolase 1403 72.19 +1 1386952..1387857 + 301 119384160 - Pden_1419 - hypothetical protein 1404 69.60 0 1387841..1388830 - 329 119384161 - Pden_1420 - tRNA-dihydrouridine synthase A 1405 60.70 -1 1388943..1389998 + 351 119384162 - Pden_1421 - phage integrase family protein 1406 65.61 0 1390072..1390542 - 156 119384163 - Pden_1422 - BadM/Rrf2 family transcriptional regulator 1407 70.04 0 1390665..1391582 + 305 119384164 - Pden_1423 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1408 66.67 0 1391595..1392215 + 206 119384165 - Pden_1424 - methyltransferase type 11 1409 57.57 -2 1392368..1395784 - 1138 119384166 - Pden_1425 - ABC transporter related 1410 60.69 -1 1395781..1396800 - 339 119384167 - Pden_1426 - major facilitator transporter 1411 56.91 -2 1396961..1399102 - 713 119384168 - Pden_1427 - TonB-dependent receptor 1412 60.51 -1 1399197..1400186 - 329 119384169 - Pden_1428 - helix-turn-helix domain-containing protein 1413 59.09 -1 1400353..1400946 + 197 119384170 - Pden_1429 - lysine exporter protein LysE/YggA 1414 58.33 -1 1400925..1401488 + 187 119384171 - Pden_1430 - hypothetical protein 1415 66.37 0 1401527..1402195 + 222 119384172 - Pden_1431 - GntR family transcriptional regulator 1416 71.86 +1 1402280..1402837 + 185 119384173 - Pden_1432 - BioY protein 1417 68.21 0 1402834..1403808 + 324 119384174 - Pden_1433 - biotin synthase 1418 72.21 +1 1403811..1405253 - 480 119384175 - Pden_1434 - GntR family transcriptional regulator 1419 67.53 0 1405317..1406012 + 231 119384176 - Pden_1435 - glutamine amidotransferase class-I 1420 66.67 0 1406009..1406689 + 226 119384177 - Pden_1436 - MOSC domain-containing protein 1421 67.96 0 1406686..1407534 + 282 119384178 - Pden_1437 - pyridoxal kinase 1422 61.50 -1 1407734..1409686 - 650 119384179 - Pden_1438 - pathogenesis-related protein 1423 57.40 -2 1409683..1411917 - 744 119384180 - Pden_1439 - hypothetical protein 1424 57.41 -2 1412139..1412408 + 89 119384181 - Pden_1440 - hypothetical protein 1425 59.09 -1 1412411..1412872 + 153 119384182 - Pden_1441 - hypothetical protein 1426 59.04 -1 1412869..1413117 - 82 119384183 - Pden_1442 - hypothetical protein 1427 61.90 -1 1413275..1413652 + 125 119384184 - Pden_1443 - hypothetical protein 1428 64.66 0 1413649..1414047 + 132 119384185 - Pden_1444 - cupin 2 domain-containing protein 1429 57.89 -2 1414120..1414404 + 94 119384186 - Pden_1445 - hypothetical protein 1430 64.11 0 1414397..1415647 + 416 119384187 - Pden_1446 - major facilitator transporter 1431 65.38 0 1415738..1416283 + 181 119384188 - Pden_1447 - PEBP family protein 1432 64.73 0 1416302..1417177 + 291 119384189 - Pden_1448 - PhzF family phenazine biosynthesis protein 1433 62.25 -1 1417178..1417720 - 180 119384190 - Pden_1449 - hypothetical protein 1434 62.86 0 1417876..1418190 - 104 119384191 - Pden_1450 - alpha/beta hydrolase 1435 52.92 -2 1418685..1418975 - 96 119384192 - Pden_1452 - hypothetical protein 1436 56.13 -2 1419245..1420051 + 268 119384193 - Pden_1453 - DNA polymerase, beta-like 1437 60.70 -1 1420288..1421376 + 362 119384194 - Pden_1454 - glutathione S-transferase-like protein 1438 59.71 -1 1421594..1422829 - 411 119384195 - Pden_1455 - major facilitator transporter 1439 59.96 -1 1422907..1423398 + 163 119384196 - Pden_1456 - HxlR family transcriptional regulator 1440 62.06 -1 1423406..1424317 - 303 119384197 - Pden_1457 - alpha/beta hydrolase 1441 59.62 -1 1424485..1425009 + 174 119384198 - Pden_1458 - cupin 2 domain-containing protein 1442 60.43 -1 1425006..1425662 + 218 119384199 - Pden_1459 - DSBA oxidoreductase 1443 61.07 -1 1425659..1426087 + 142 119384200 - Pden_1460 - GCN5-related N-acetyltransferase 1444 60.04 -1 1426069..1426521 - 150 119384201 - Pden_1461 - GCN5-related N-acetyltransferase 1445 55.81 -2 1426766..1427152 + 128 119384202 - Pden_1462 - GCN5-related N-acetyltransferase 1446 59.72 -1 1427197..1428117 - 306 119384203 - Pden_1463 - LysR family transcriptional regulator 1447 63.29 0 1428263..1429180 + 305 119384204 - Pden_1464 - aminotransferase, class IV 1448 70.85 +1 1429171..1429911 - 246 119384205 - Pden_1465 - hypothetical protein 1449 69.93 0 1430186..1430767 + 193 119384206 - Pden_1466 - helix-turn-helix domain-containing protein 1450 64.30 0 1430770..1431402 - 210 119384207 - Pden_1467 - lysine exporter protein LysE/YggA 1451 64.84 0 1431405..1431950 - 181 119384208 - Pden_1468 - hypothetical protein 1452 62.28 -1 1432068..1432523 + 151 119384209 - Pden_1469 - AsnC family transcriptional regulator 1453 63.14 0 1432553..1433176 + 207 119384210 - Pden_1470 - lysine exporter protein LysE/YggA 1454 60.56 -1 1433351..1434349 + 332 119384211 - Pden_1471 - LysR family transcriptional regulator 1455 60.37 -1 1434342..1435595 + 417 119384212 - Pden_1472 - methyltransferase type 12 1456 57.42 -2 1435611..1436129 - 172 119384213 - Pden_1473 - dehydratase 1457 61.97 -1 1436263..1436496 - 77 119384214 - Pden_1474 - hypothetical protein 1458 65.78 0 1436499..1437620 - 373 119384215 - Pden_1475 - conjugation TrbI family protein 1459 66.76 0 1437617..1438645 - 342 119384216 - Pden_1476 - conjugal transfer protein TrbG/VirB9/CagX 1460 65.07 0 1438642..1439331 - 229 119384217 - Pden_1477 - conjugal transfer protein 1461 67.63 0 1439328..1440680 - 450 119384218 - Pden_1478 - TrbL/VirB6 plasmid conjugal transfer protein 1462 69.44 0 1440684..1440971 - 95 119384219 - Pden_1479 - hypothetical protein 1463 64.37 0 1440989..1441771 - 260 119384220 - Pden_1480 - conjugal transfer protein TrbJ 1464 65.23 0 1441768..1444278 - 836 119384221 - Pden_1481 - AAA ATPase 1465 67.69 0 1444285..1444578 - 97 119384222 - Pden_1482 - conjugal transfer protein trbB 1466 64.56 0 1444645..1444977 - 110 119384223 - Pden_1483 - conjugal transfer protein TrbC 1467 66.57 0 1444974..1445972 - 332 119384224 - Pden_1484 - type II secretion system protein E 1468 55.05 -2 1446345..1447265 + 306 119384225 - Pden_1485 - helix-turn-helix domain-containing protein 1469 57.64 -2 1447354..1449435 + 693 119384226 - Pden_1486 - TonB-dependent receptor 1470 60.24 -1 1449435..1450445 + 336 119384227 - Pden_1487 - methyltransferase type 12 1471 63.57 0 1450447..1451349 + 300 119384228 - Pden_1488 - putative sulfonate/nitrate transport system substrate-binding protein 1472 63.80 0 1451349..1452080 + 243 119384229 - Pden_1489 - binding-protein-dependent transport systems inner membrane component 1473 57.56 -2 1452077..1452658 + 193 119384230 - Pden_1490 - ABC transporter related 1474 61.09 -1 1452668..1453366 - 232 119384231 - Pden_1491 - TetR family transcriptional regulator 1475 64.31 0 1453406..1455184 - 592 119384232 - Pden_1492 - ABC transporter related 1476 63.98 0 1455181..1457001 - 606 119384233 - Pden_1493 - ABC transporter related 1477 63.22 0 1457084..1458244 - 386 119384234 - Pden_1494 - monooxygenase, FAD-binding 1478 59.83 -1 1458248..1460236 - 662 119384235 - Pden_1495 - TonB-dependent receptor 1479 61.03 -1 1460233..1461420 - 395 119384236 - Pden_1496 - major facilitator transporter 1480 58.58 -1 1461579..1462580 + 333 119384237 - Pden_1497 - helix-turn-helix domain-containing protein 1481 58.76 -1 1462601..1463827 - 408 119384238 - Pden_1498 - major facilitator transporter 1482 55.28 -2 1463830..1465779 - 649 119384239 - Pden_1499 - TonB-dependent receptor 1483 54.58 -2 1466069..1467028 + 319 119384240 - Pden_1500 - helix-turn-helix domain-containing protein 1484 64.10 0 1467357..1467746 - 129 119384241 - Pden_1501 - hypothetical protein 1485 62.96 0 1467733..1468083 - 116 119384242 - Pden_1502 - hypothetical protein 1486 62.40 0 1468070..1469287 - 405 119384243 - Pden_1503 - hypothetical protein 1487 57.73 -2 1469486..1470022 - 178 119384244 - Pden_1504 - hypothetical protein 1488 62.94 0 1470456..1470884 - 142 119384245 - Pden_1505 - hypothetical protein 1489 63.44 0 1470887..1472872 - 661 119384246 - Pden_1506 - TRAG family protein 1490 68.66 0 1472899..1474653 - 584 119384247 - Pden_1507 - hypothetical protein 1491 67.58 0 1474897..1475661 - 254 119384248 - Pden_1508 - lytic transglycosylase, catalytic 1492 62.20 -1 1475664..1475999 - 111 119384249 - Pden_1509 - hypothetical protein 1493 67.77 0 1476066..1476608 - 180 119384250 - Pden_1510 - conjugal transfer protein precursor 1494 61.30 -1 1476605..1477126 - 173 119384251 - Pden_1511 - hypothetical protein 1495 62.15 -1 1477126..1478298 - 390 119384252 - Pden_1512 - replication protein A 1496 67.73 0 1478317..1478598 - 93 119384253 - Pden_1513 - hypothetical protein 1497 65.15 0 1478736..1479131 - 131 119384254 - Pden_1514 - hypothetical protein 1498 60.56 -1 1479202..1479561 - 119 119384255 - Pden_1515 - hypothetical protein 1499 63.64 0 1479617..1479880 - 87 119384256 - Pden_1516 - hypothetical protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0