version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1290 66.62 0 1264849..1267014 + 721 119384047 - Pden_1302 - polyphosphate kinase 1291 67.83 0 1267083..1268624 + 513 119384048 - Pden_1303 - Ppx/GppA phosphatase 1292 68.48 0 1268835..1269884 - 349 119384049 - Pden_1304 - peptidase M19, renal dipeptidase 1293 64.51 0 1270069..1270392 + 107 119384050 - Pden_1305 - antibiotic biosynthesis monooxygenase 1294 70.28 0 1270495..1271130 + 211 119384051 - Pden_1306 - cobyrinic acid a,c-diamide synthase 1295 65.97 0 1271230..1271517 + 95 119384052 - Pden_1307 - hypothetical protein 1296 65.23 0 1271560..1273785 - 741 119384053 - Pden_1308 - excinuclease ABC subunit B 1297 68.27 0 1273934..1274245 + 103 119384054 - Pden_1309 - ETC complex I subunit region 1298 73.08 +1 1274539..1275879 - 446 119384055 - Pden_1310 - integral membrane sensor signal transduction histidine kinase 1299 68.48 0 1275876..1276538 - 220 119384056 - Pden_1311 - two component transcriptional regulator 1300 70.43 0 1276535..1276933 - 132 119384057 - Pden_1312 - hypothetical protein 1301 73.61 +1 1277063..1277941 + 292 119384058 - Pden_1313 - hypothetical protein 1302 66.79 0 1278128..1279726 + 532 119384059 mdoG Pden_1314 - glucan biosynthesis protein G 1303 69.56 0 1279723..1281897 + 724 119384060 - Pden_1315 - glucosyltransferase MdoH 1304 66.23 0 1281894..1283027 + 377 119384061 - Pden_1316 - hypothetical protein 1305 68.82 0 1283098..1284765 + 555 119384062 - Pden_1317 - formate--tetrahydrofolate ligase 1306 70.81 +1 1284769..1285371 + 200 119384063 nadD Pden_1318 - nicotinic acid mononucleotide adenylyltransferase 1307 71.62 +1 1285371..1286825 + 484 119384064 - Pden_1319 - peptidase S13, D-Ala-D-Ala carboxypeptidase C 1308 69.50 0 1286836..1287258 - 140 119384065 - Pden_1320 - hypothetical protein 1309 64.03 0 1287350..1288942 + 530 119384066 lysK Pden_1321 - lysyl-tRNA synthetase 1310 64.97 0 1289083..1291377 + 764 119384067 - Pden_1322 - hypothetical protein 1311 71.19 +1 1291414..1291899 - 161 119384068 - Pden_1323 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1312 67.55 0 1291957..1292970 - 337 119384069 - Pden_1324 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1313 69.51 0 1292967..1294022 - 351 119384070 - Pden_1325 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1314 65.48 0 1294024..1294947 - 307 119384071 - Pden_1326 - binding-protein-dependent transport systems inner membrane component 1315 66.12 0 1294951..1295868 - 305 119384072 - Pden_1327 - binding-protein-dependent transport systems inner membrane component 1316 62.24 -1 1295935..1297539 - 534 119384073 - Pden_1328 - extracellular solute-binding protein 1317 68.37 0 1297935..1298813 + 292 119384074 - Pden_1329 - thioredoxin reductase-like 1318 63.73 0 1298865..1299239 + 124 119384075 - Pden_1330 - cysteinyl-tRNA synthetase-like 1319 66.76 0 1299236..1300336 + 366 119384076 - Pden_1331 - cobalamin synthesis protein, P47K 1320 66.92 0 1300377..1300775 + 132 119384077 - Pden_1332 - helix-turn-helix domain-containing protein 1321 68.72 0 1300801..1302015 - 404 119384078 - Pden_1333 - cobalamin synthesis protein, P47K 1322 61.19 -1 1302041..1302259 - 72 119384079 - Pden_1334 - hypothetical protein 1323 73.48 +1 1302268..1302927 - 219 119384080 - Pden_1335 - riboflavin biosynthesis protein RibD 1324 65.59 0 1302938..1303402 - 154 119384081 - Pden_1336 - phosphoribosyl-AMP cyclohydrolase 1325 63.13 0 1303421..1303873 - 150 119384082 - Pden_1337 - hypothetical protein 1326 65.36 0 1304019..1305242 + 407 119384083 - Pden_1338 - cobalamin synthesis protein, P47K 1327 68.91 0 1305333..1306001 + 222 119384084 - Pden_1339 - hypothetical protein 1328 69.50 0 1306001..1306318 + 105 119384085 - Pden_1340 - hypothetical protein 1329 67.60 0 1306419..1307921 + 500 119384086 - Pden_1341 - extracellular solute-binding protein 1330 69.22 0 1307918..1308856 + 312 119384087 - Pden_1342 - binding-protein-dependent transport systems inner membrane component 1331 69.82 0 1308853..1309677 + 274 119384088 - Pden_1343 - binding-protein-dependent transport systems inner membrane component 1332 72.09 +1 1309674..1311110 + 478 119384089 - Pden_1344 - ABC transporter related 1333 70.16 0 1312023..1312937 - 304 119384090 - Pden_1346 - methylisocitrate lyase 1334 67.78 0 1312934..1314103 - 389 119384091 - Pden_1347 - methylcitrate synthase 1335 68.37 0 1314114..1315637 - 507 119384092 - Pden_1348 - 2-methylcitrate dehydratase 1336 67.41 0 1315624..1316025 - 133 119384093 - Pden_1349 - thioesterase superfamily protein 1337 70.63 0 1316144..1317529 + 461 119384094 - Pden_1350 - hypothetical protein 1338 65.22 0 1317508..1318200 - 230 119384095 - Pden_1351 - LysR, substrate-binding 1339 53.86 -2 1320063..1321046 + 327 119384096 - Pden_1354 - hypothetical protein 1340 56.36 -2 1321075..1322112 + 345 119384097 - Pden_1355 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1341 53.92 -2 1323389..1323796 - 135 119384098 - Pden_1357 - hypothetical protein 1342 68.75 0 1323995..1324810 - 271 119384099 - Pden_1358 - methyltransferase type 11 1343 64.79 0 1324827..1325252 - 141 119384100 - Pden_1359 - pseudoazurin 1344 71.85 +1 1325264..1326034 - 256 119384101 - Pden_1360 - ABC transporter related 1345 74.12 +1 1326031..1327104 - 357 119384102 - Pden_1361 - transport system permease protein 1346 65.18 0 1327101..1328108 - 335 119384103 - Pden_1362 - periplasmic binding protein 1347 65.42 0 1328565..1330172 - 535 119384104 - Pden_1363 - isocitrate lyase 1348 69.25 0 1330296..1331918 - 540 119384105 - Pden_1364 - malate synthase 1349 70.71 0 1332053..1333486 + 477 119384106 - Pden_1365 - hypothetical protein 1350 67.55 0 1333483..1334499 - 338 119384107 - Pden_1366 - hypothetical protein 1351 64.23 0 1334483..1335343 - 286 119384108 - Pden_1367 - periplasmic binding protein 1352 61.84 -1 1335337..1337220 - 627 119384109 - Pden_1368 - TonB-dependent receptor 1353 57.83 -2 1337561..1337956 - 131 119384110 - Pden_1369 - hypothetical protein 1354 54.86 -2 1338220..1338939 + 239 119384111 - Pden_1370 - hypothetical protein 1355 61.78 -1 1338995..1339444 + 149 119384112 - Pden_1371 - hypothetical protein 1356 65.80 0 1339398..1340204 - 268 119384113 - Pden_1372 - phosphoesterase or phosphohydrolase-like 1357 65.82 0 1340206..1341507 - 433 119384114 - Pden_1373 - ATP-dependent Lon protease 1358 67.05 0 1341954..1342742 - 262 119384115 - Pden_1374 - metallophosphoesterase 1359 64.22 0 1342739..1343188 - 149 119384116 - Pden_1375 - hypothetical protein 1360 65.40 0 1343653..1344600 - 315 119384117 - Pden_1376 - lipoyl synthase 1361 63.49 0 1344725..1345291 + 188 119384118 - Pden_1377 - redoxin domain-containing protein 1362 71.17 +1 1345362..1346516 - 384 119384119 - Pden_1378 - hypothetical protein 1363 71.17 +1 1346729..1347061 + 110 119384120 - Pden_1379 - hypothetical protein 1364 66.86 0 1347048..1348622 - 524 119384121 - Pden_1380 - protein of unknown function DUF853, NPT hydrolase putative 1365 69.20 0 1349084..1349872 + 262 119384122 - Pden_1381 - invasion associated locus B family protein 1366 68.87 0 1349947..1351491 - 514 119384123 - Pden_1382 - protease Do 1367 71.43 +1 1351705..1351956 - 83 119384124 - Pden_1383 - hypothetical protein 1368 64.90 0 1352030..1355647 - 1205 119384125 - Pden_1384 - ribonucleotide-diphosphate reductase subunit alpha 1369 72.14 +1 1356043..1356627 - 194 119384126 - Pden_1385 - 5-formyltetrahydrofolate cyclo-ligase 1370 66.39 0 1356612..1358069 - 485 119384127 - Pden_1386 - magnesium transporter 1371 69.73 0 1358090..1358905 - 271 119384128 - Pden_1387 - inositol monophosphatase 1372 60.83 -1 1358986..1359345 - 119 119384129 - Pden_1388 - XRE family transcriptional regulator 1373 70.49 0 1359524..1360492 + 322 119384130 - Pden_1389 - alcohol dehydrogenase 1374 61.22 -1 1360615..1361385 + 256 119384131 - Pden_1390 - hypothetical protein 1375 63.79 0 1361653..1361895 + 80 119384132 - Pden_1391 - BolA family protein 1376 59.50 -1 1361947..1362309 + 120 119384133 - Pden_1392 - glutaredoxin-like protein 1377 71.84 +1 1362397..1363092 - 231 119384134 - Pden_1393 - hypothetical protein 1378 69.70 0 1363100..1363528 - 142 119384135 - Pden_1394 - protein of unknown function DUF883, ElaB 1379 68.97 0 1363627..1364754 - 375 119384136 - Pden_1395 - aminotransferase, class V 1380 65.83 0 1364894..1365610 + 238 119384137 - Pden_1396 - glutamine amidotransferase class-I 1381 65.05 0 1365607..1366965 + 452 119384138 - Pden_1397 - glutamate--ammonia ligase 1382 68.34 0 1367038..1368348 + 436 119384139 - Pden_1398 - FAD dependent oxidoreductase 1383 65.60 0 1368345..1369001 - 218 119384140 - Pden_1399 - hypothetical protein 1384 64.83 0 1369014..1371131 - 705 119384141 - Pden_1400 - (p)ppGpp synthetase I, SpoT/RelA 1385 63.03 0 1371154..1371510 - 118 119384142 - Pden_1401 - DNA-directed RNA polymerase subunit omega 1386 65.24 0 1371581..1372072 - 163 119384143 - Pden_1402 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1387 60.87 -1 1372187..1372738 + 183 119384144 - Pden_1403 - hypothetical protein 1388 70.62 0 1372781..1374172 - 463 119384145 - Pden_1404 - hypothetical protein 1389 71.70 +1 1374162..1375871 - 569 119384146 - Pden_1405 - hypothetical protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0