version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1259 66.37 0 1229999..1231351 - 450 119384016 - Pden_1271 - acetyl-CoA carboxylase biotin carboxylase subunit 1260 67.82 0 1231359..1231880 - 173 119384017 - Pden_1272 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 1261 70.37 0 1231984..1232874 - 296 119384018 - Pden_1273 - lipid A biosynthesis acyltransferase 1262 68.50 0 1232900..1233826 - 308 119384019 - Pden_1274 - hypothetical protein 1263 69.94 0 1234011..1236029 - 672 119384020 - Pden_1275 - transketolase 1264 71.20 +1 1236124..1238088 + 654 119384021 - Pden_1276 - hypothetical protein 1265 66.26 0 1238179..1239669 + 496 119384022 - Pden_1277 - uracil-xanthine permease 1266 69.18 0 1239663..1241015 - 450 119384023 - Pden_1278 - hypothetical protein 1267 72.53 +1 1241012..1241983 - 323 119384024 - Pden_1279 - phage integrase family protein 1268 74.18 +1 1241980..1243602 - 540 119384025 - Pden_1280 - hypothetical protein 1269 67.83 0 1243589..1243846 - 85 119384026 - Pden_1281 - hypothetical protein 1270 70.95 +1 1243974..1244510 + 178 119384027 - Pden_1282 - shikimate kinase 1271 69.47 0 1244507..1245610 + 367 119384028 - Pden_1283 - 3-dehydroquinate synthase 1272 66.90 0 1245607..1246029 - 140 119384029 - Pden_1284 - monovalent cation/proton antiporter, MnhG/PhaG subunit 1273 63.48 0 1246026..1246307 - 93 119384030 - Pden_1285 - putative monovalent cation/H+ antiporter subunit F 1274 65.44 0 1246304..1246792 - 162 119384031 - Pden_1286 - cation antiporter 1275 68.17 0 1246789..1248519 - 576 119384032 - Pden_1287 - putative monovalent cation/H+ antiporter subunit D 1276 65.22 0 1248519..1248863 - 114 119384033 - Pden_1288 - putative monovalent cation/H+ antiporter subunit C 1277 67.15 0 1248863..1251742 - 959 119384034 - Pden_1289 - putative monovalent cation/H+ antiporter subunit A 1278 70.20 0 1251889..1253133 - 414 119384035 - Pden_1290 - Orn/DAP/Arg decarboxylase 2 1279 59.92 -1 1253114..1253350 - 78 119384036 - Pden_1291 - hypothetical protein 1280 68.00 0 1253370..1254941 - 523 119384037 - Pden_1292 - AMP-dependent synthetase and ligase 1281 64.09 0 1254934..1255476 - 180 119384038 - Pden_1293 - serine acetyltransferase CysE, putative 1282 67.51 0 1255559..1256623 - 354 119384039 - Pden_1294 - hypothetical protein 1283 69.74 0 1256696..1257868 - 390 119384040 - Pden_1295 - lipase/acylhydrolase, putative 1284 64.96 0 1257917..1259086 - 389 119384041 - Pden_1296 - DegT/DnrJ/EryC1/StrS aminotransferase 1285 68.83 0 1259083..1260006 - 307 119384042 - Pden_1297 - NAD-dependent epimerase/dehydratase 1286 66.04 0 1260007..1261131 - 374 119384043 - Pden_1298 - GDP-mannose 4,6-dehydratase 1287 64.45 0 1261338..1262690 - 450 119384044 - Pden_1299 - prolyl-tRNA synthetase 1288 68.20 0 1262820..1264124 + 434 119384045 - Pden_1300 - hypothetical protein 1289 72.46 +1 1264128..1264817 + 229 119384046 - Pden_1301 - hypothetical protein 1290 66.62 0 1264849..1267014 + 721 119384047 - Pden_1302 - polyphosphate kinase 1291 67.83 0 1267083..1268624 + 513 119384048 - Pden_1303 - Ppx/GppA phosphatase 1292 68.48 0 1268835..1269884 - 349 119384049 - Pden_1304 - peptidase M19, renal dipeptidase 1293 64.51 0 1270069..1270392 + 107 119384050 - Pden_1305 - antibiotic biosynthesis monooxygenase 1294 70.28 0 1270495..1271130 + 211 119384051 - Pden_1306 - cobyrinic acid a,c-diamide synthase 1295 65.97 0 1271230..1271517 + 95 119384052 - Pden_1307 - hypothetical protein 1296 65.23 0 1271560..1273785 - 741 119384053 - Pden_1308 - excinuclease ABC subunit B 1297 68.27 0 1273934..1274245 + 103 119384054 - Pden_1309 - ETC complex I subunit region 1298 73.08 +1 1274539..1275879 - 446 119384055 - Pden_1310 - integral membrane sensor signal transduction histidine kinase 1299 68.48 0 1275876..1276538 - 220 119384056 - Pden_1311 - two component transcriptional regulator 1300 70.43 0 1276535..1276933 - 132 119384057 - Pden_1312 - hypothetical protein 1301 73.61 +1 1277063..1277941 + 292 119384058 - Pden_1313 - hypothetical protein 1302 66.79 0 1278128..1279726 + 532 119384059 mdoG Pden_1314 - glucan biosynthesis protein G 1303 69.56 0 1279723..1281897 + 724 119384060 - Pden_1315 - glucosyltransferase MdoH 1304 66.23 0 1281894..1283027 + 377 119384061 - Pden_1316 - hypothetical protein 1305 68.82 0 1283098..1284765 + 555 119384062 - Pden_1317 - formate--tetrahydrofolate ligase 1306 70.81 +1 1284769..1285371 + 200 119384063 nadD Pden_1318 - nicotinic acid mononucleotide adenylyltransferase 1307 71.62 +1 1285371..1286825 + 484 119384064 - Pden_1319 - peptidase S13, D-Ala-D-Ala carboxypeptidase C 1308 69.50 0 1286836..1287258 - 140 119384065 - Pden_1320 - hypothetical protein 1309 64.03 0 1287350..1288942 + 530 119384066 lysK Pden_1321 - lysyl-tRNA synthetase 1310 64.97 0 1289083..1291377 + 764 119384067 - Pden_1322 - hypothetical protein 1311 71.19 +1 1291414..1291899 - 161 119384068 - Pden_1323 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1312 67.55 0 1291957..1292970 - 337 119384069 - Pden_1324 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1313 69.51 0 1292967..1294022 - 351 119384070 - Pden_1325 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1314 65.48 0 1294024..1294947 - 307 119384071 - Pden_1326 - binding-protein-dependent transport systems inner membrane component 1315 66.12 0 1294951..1295868 - 305 119384072 - Pden_1327 - binding-protein-dependent transport systems inner membrane component 1316 62.24 -1 1295935..1297539 - 534 119384073 - Pden_1328 - extracellular solute-binding protein 1317 68.37 0 1297935..1298813 + 292 119384074 - Pden_1329 - thioredoxin reductase-like 1318 63.73 0 1298865..1299239 + 124 119384075 - Pden_1330 - cysteinyl-tRNA synthetase-like 1319 66.76 0 1299236..1300336 + 366 119384076 - Pden_1331 - cobalamin synthesis protein, P47K 1320 66.92 0 1300377..1300775 + 132 119384077 - Pden_1332 - helix-turn-helix domain-containing protein 1321 68.72 0 1300801..1302015 - 404 119384078 - Pden_1333 - cobalamin synthesis protein, P47K 1322 61.19 -1 1302041..1302259 - 72 119384079 - Pden_1334 - hypothetical protein 1323 73.48 +1 1302268..1302927 - 219 119384080 - Pden_1335 - riboflavin biosynthesis protein RibD 1324 65.59 0 1302938..1303402 - 154 119384081 - Pden_1336 - phosphoribosyl-AMP cyclohydrolase 1325 63.13 0 1303421..1303873 - 150 119384082 - Pden_1337 - hypothetical protein 1326 65.36 0 1304019..1305242 + 407 119384083 - Pden_1338 - cobalamin synthesis protein, P47K 1327 68.91 0 1305333..1306001 + 222 119384084 - Pden_1339 - hypothetical protein 1328 69.50 0 1306001..1306318 + 105 119384085 - Pden_1340 - hypothetical protein 1329 67.60 0 1306419..1307921 + 500 119384086 - Pden_1341 - extracellular solute-binding protein 1330 69.22 0 1307918..1308856 + 312 119384087 - Pden_1342 - binding-protein-dependent transport systems inner membrane component 1331 69.82 0 1308853..1309677 + 274 119384088 - Pden_1343 - binding-protein-dependent transport systems inner membrane component 1332 72.09 +1 1309674..1311110 + 478 119384089 - Pden_1344 - ABC transporter related 1333 70.16 0 1312023..1312937 - 304 119384090 - Pden_1346 - methylisocitrate lyase 1334 67.78 0 1312934..1314103 - 389 119384091 - Pden_1347 - methylcitrate synthase 1335 68.37 0 1314114..1315637 - 507 119384092 - Pden_1348 - 2-methylcitrate dehydratase 1336 67.41 0 1315624..1316025 - 133 119384093 - Pden_1349 - thioesterase superfamily protein 1337 70.63 0 1316144..1317529 + 461 119384094 - Pden_1350 - hypothetical protein 1338 65.22 0 1317508..1318200 - 230 119384095 - Pden_1351 - LysR, substrate-binding 1339 53.86 -2 1320063..1321046 + 327 119384096 - Pden_1354 - hypothetical protein 1340 56.36 -2 1321075..1322112 + 345 119384097 - Pden_1355 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1341 53.92 -2 1323389..1323796 - 135 119384098 - Pden_1357 - hypothetical protein 1342 68.75 0 1323995..1324810 - 271 119384099 - Pden_1358 - methyltransferase type 11 1343 64.79 0 1324827..1325252 - 141 119384100 - Pden_1359 - pseudoazurin 1344 71.85 +1 1325264..1326034 - 256 119384101 - Pden_1360 - ABC transporter related 1345 74.12 +1 1326031..1327104 - 357 119384102 - Pden_1361 - transport system permease protein 1346 65.18 0 1327101..1328108 - 335 119384103 - Pden_1362 - periplasmic binding protein 1347 65.42 0 1328565..1330172 - 535 119384104 - Pden_1363 - isocitrate lyase 1348 69.25 0 1330296..1331918 - 540 119384105 - Pden_1364 - malate synthase 1349 70.71 0 1332053..1333486 + 477 119384106 - Pden_1365 - hypothetical protein 1350 67.55 0 1333483..1334499 - 338 119384107 - Pden_1366 - hypothetical protein 1351 64.23 0 1334483..1335343 - 286 119384108 - Pden_1367 - periplasmic binding protein 1352 61.84 -1 1335337..1337220 - 627 119384109 - Pden_1368 - TonB-dependent receptor 1353 57.83 -2 1337561..1337956 - 131 119384110 - Pden_1369 - hypothetical protein 1354 54.86 -2 1338220..1338939 + 239 119384111 - Pden_1370 - hypothetical protein 1355 61.78 -1 1338995..1339444 + 149 119384112 - Pden_1371 - hypothetical protein 1356 65.80 0 1339398..1340204 - 268 119384113 - Pden_1372 - phosphoesterase or phosphohydrolase-like 1357 65.82 0 1340206..1341507 - 433 119384114 - Pden_1373 - ATP-dependent Lon protease 1358 67.05 0 1341954..1342742 - 262 119384115 - Pden_1374 - metallophosphoesterase 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.