version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1237 68.46 0 1212380..1213438 + 352 119383994 - Pden_1249 - binding-protein-dependent transport systems inner membrane component 1238 69.32 0 1213435..1214340 + 301 119383995 - Pden_1250 - binding-protein-dependent transport systems inner membrane component 1239 69.59 0 1214337..1215191 + 284 119383996 - Pden_1251 - ABC transporter related 1240 68.52 0 1215238..1215993 + 251 119383997 - Pden_1252 - ABC transporter related 1241 72.60 +1 1215990..1216697 - 235 119383998 - Pden_1253 - hypothetical protein 1242 69.92 0 1216822..1218267 + 481 119383999 - Pden_1254 - aldehyde dehydrogenase 1243 69.35 0 1218294..1219037 + 247 119384000 - Pden_1255 - 3-ketoacyl-(acyl-carrier-protein) reductase 1244 68.59 0 1219069..1219899 - 276 119384001 - Pden_1256 - ABC-3 protein 1245 66.67 0 1219899..1220759 - 286 119384002 - Pden_1257 - ABC-3 protein 1246 67.82 0 1220756..1221625 - 289 119384003 - Pden_1258 - ABC transporter related 1247 68.65 0 1221618..1222523 - 301 119384004 - Pden_1259 - periplasmic solute binding protein 1248 68.56 0 1222629..1223051 + 140 119384005 - Pden_1260 - ferric uptake regulator family protein 1249 67.73 0 1223048..1223422 + 124 119384006 - Pden_1261 - hypothetical protein 1250 67.73 0 1223419..1223793 - 124 119384007 - Pden_1262 - hypothetical protein 1251 68.28 0 1223795..1224847 - 350 119384008 - Pden_1263 - hypothetical protein 1252 70.06 0 1224844..1225551 - 235 119384009 - Pden_1264 - peptidyl-tRNA hydrolase 1253 63.65 0 1225747..1226376 + 209 119384010 - Pden_1265 - endopeptidase Clp 1254 63.35 0 1226538..1227803 + 421 119384011 clpX Pden_1266 - ATP-dependent protease ATP-binding subunit 1255 64.80 0 1228027..1228401 + 124 119384012 - Pden_1267 - NADH dehydrogenase 1256 68.38 0 1228406..1228873 + 155 119384013 - Pden_1268 - hypothetical protein 1257 68.90 0 1228870..1229361 + 163 119384014 - Pden_1269 - hypothetical protein 1258 65.10 0 1229325..1229963 - 212 119384015 aat Pden_1270 - leucyl/phenylalanyl-tRNA--protein transferase 1259 66.37 0 1229999..1231351 - 450 119384016 - Pden_1271 - acetyl-CoA carboxylase biotin carboxylase subunit 1260 67.82 0 1231359..1231880 - 173 119384017 - Pden_1272 - acetyl-CoA carboxylase, biotin carboxyl carrier protein 1261 70.37 0 1231984..1232874 - 296 119384018 - Pden_1273 - lipid A biosynthesis acyltransferase 1262 68.50 0 1232900..1233826 - 308 119384019 - Pden_1274 - hypothetical protein 1263 69.94 0 1234011..1236029 - 672 119384020 - Pden_1275 - transketolase 1264 71.20 +1 1236124..1238088 + 654 119384021 - Pden_1276 - hypothetical protein 1265 66.26 0 1238179..1239669 + 496 119384022 - Pden_1277 - uracil-xanthine permease 1266 69.18 0 1239663..1241015 - 450 119384023 - Pden_1278 - hypothetical protein 1267 72.53 +1 1241012..1241983 - 323 119384024 - Pden_1279 - phage integrase family protein 1268 74.18 +1 1241980..1243602 - 540 119384025 - Pden_1280 - hypothetical protein 1269 67.83 0 1243589..1243846 - 85 119384026 - Pden_1281 - hypothetical protein 1270 70.95 +1 1243974..1244510 + 178 119384027 - Pden_1282 - shikimate kinase 1271 69.47 0 1244507..1245610 + 367 119384028 - Pden_1283 - 3-dehydroquinate synthase 1272 66.90 0 1245607..1246029 - 140 119384029 - Pden_1284 - monovalent cation/proton antiporter, MnhG/PhaG subunit 1273 63.48 0 1246026..1246307 - 93 119384030 - Pden_1285 - putative monovalent cation/H+ antiporter subunit F 1274 65.44 0 1246304..1246792 - 162 119384031 - Pden_1286 - cation antiporter 1275 68.17 0 1246789..1248519 - 576 119384032 - Pden_1287 - putative monovalent cation/H+ antiporter subunit D 1276 65.22 0 1248519..1248863 - 114 119384033 - Pden_1288 - putative monovalent cation/H+ antiporter subunit C 1277 67.15 0 1248863..1251742 - 959 119384034 - Pden_1289 - putative monovalent cation/H+ antiporter subunit A 1278 70.20 0 1251889..1253133 - 414 119384035 - Pden_1290 - Orn/DAP/Arg decarboxylase 2 1279 59.92 -1 1253114..1253350 - 78 119384036 - Pden_1291 - hypothetical protein 1280 68.00 0 1253370..1254941 - 523 119384037 - Pden_1292 - AMP-dependent synthetase and ligase 1281 64.09 0 1254934..1255476 - 180 119384038 - Pden_1293 - serine acetyltransferase CysE, putative 1282 67.51 0 1255559..1256623 - 354 119384039 - Pden_1294 - hypothetical protein 1283 69.74 0 1256696..1257868 - 390 119384040 - Pden_1295 - lipase/acylhydrolase, putative 1284 64.96 0 1257917..1259086 - 389 119384041 - Pden_1296 - DegT/DnrJ/EryC1/StrS aminotransferase 1285 68.83 0 1259083..1260006 - 307 119384042 - Pden_1297 - NAD-dependent epimerase/dehydratase 1286 66.04 0 1260007..1261131 - 374 119384043 - Pden_1298 - GDP-mannose 4,6-dehydratase 1287 64.45 0 1261338..1262690 - 450 119384044 - Pden_1299 - prolyl-tRNA synthetase 1288 68.20 0 1262820..1264124 + 434 119384045 - Pden_1300 - hypothetical protein 1289 72.46 +1 1264128..1264817 + 229 119384046 - Pden_1301 - hypothetical protein 1290 66.62 0 1264849..1267014 + 721 119384047 - Pden_1302 - polyphosphate kinase 1291 67.83 0 1267083..1268624 + 513 119384048 - Pden_1303 - Ppx/GppA phosphatase 1292 68.48 0 1268835..1269884 - 349 119384049 - Pden_1304 - peptidase M19, renal dipeptidase 1293 64.51 0 1270069..1270392 + 107 119384050 - Pden_1305 - antibiotic biosynthesis monooxygenase 1294 70.28 0 1270495..1271130 + 211 119384051 - Pden_1306 - cobyrinic acid a,c-diamide synthase 1295 65.97 0 1271230..1271517 + 95 119384052 - Pden_1307 - hypothetical protein 1296 65.23 0 1271560..1273785 - 741 119384053 - Pden_1308 - excinuclease ABC subunit B 1297 68.27 0 1273934..1274245 + 103 119384054 - Pden_1309 - ETC complex I subunit region 1298 73.08 +1 1274539..1275879 - 446 119384055 - Pden_1310 - integral membrane sensor signal transduction histidine kinase 1299 68.48 0 1275876..1276538 - 220 119384056 - Pden_1311 - two component transcriptional regulator 1300 70.43 0 1276535..1276933 - 132 119384057 - Pden_1312 - hypothetical protein 1301 73.61 +1 1277063..1277941 + 292 119384058 - Pden_1313 - hypothetical protein 1302 66.79 0 1278128..1279726 + 532 119384059 mdoG Pden_1314 - glucan biosynthesis protein G 1303 69.56 0 1279723..1281897 + 724 119384060 - Pden_1315 - glucosyltransferase MdoH 1304 66.23 0 1281894..1283027 + 377 119384061 - Pden_1316 - hypothetical protein 1305 68.82 0 1283098..1284765 + 555 119384062 - Pden_1317 - formate--tetrahydrofolate ligase 1306 70.81 +1 1284769..1285371 + 200 119384063 nadD Pden_1318 - nicotinic acid mononucleotide adenylyltransferase 1307 71.62 +1 1285371..1286825 + 484 119384064 - Pden_1319 - peptidase S13, D-Ala-D-Ala carboxypeptidase C 1308 69.50 0 1286836..1287258 - 140 119384065 - Pden_1320 - hypothetical protein 1309 64.03 0 1287350..1288942 + 530 119384066 lysK Pden_1321 - lysyl-tRNA synthetase 1310 64.97 0 1289083..1291377 + 764 119384067 - Pden_1322 - hypothetical protein 1311 71.19 +1 1291414..1291899 - 161 119384068 - Pden_1323 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 1312 67.55 0 1291957..1292970 - 337 119384069 - Pden_1324 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1313 69.51 0 1292967..1294022 - 351 119384070 - Pden_1325 - oligopeptide/dipeptide ABC transporter, ATPase subunit 1314 65.48 0 1294024..1294947 - 307 119384071 - Pden_1326 - binding-protein-dependent transport systems inner membrane component 1315 66.12 0 1294951..1295868 - 305 119384072 - Pden_1327 - binding-protein-dependent transport systems inner membrane component 1316 62.24 -1 1295935..1297539 - 534 119384073 - Pden_1328 - extracellular solute-binding protein 1317 68.37 0 1297935..1298813 + 292 119384074 - Pden_1329 - thioredoxin reductase-like 1318 63.73 0 1298865..1299239 + 124 119384075 - Pden_1330 - cysteinyl-tRNA synthetase-like 1319 66.76 0 1299236..1300336 + 366 119384076 - Pden_1331 - cobalamin synthesis protein, P47K 1320 66.92 0 1300377..1300775 + 132 119384077 - Pden_1332 - helix-turn-helix domain-containing protein 1321 68.72 0 1300801..1302015 - 404 119384078 - Pden_1333 - cobalamin synthesis protein, P47K 1322 61.19 -1 1302041..1302259 - 72 119384079 - Pden_1334 - hypothetical protein 1323 73.48 +1 1302268..1302927 - 219 119384080 - Pden_1335 - riboflavin biosynthesis protein RibD 1324 65.59 0 1302938..1303402 - 154 119384081 - Pden_1336 - phosphoribosyl-AMP cyclohydrolase 1325 63.13 0 1303421..1303873 - 150 119384082 - Pden_1337 - hypothetical protein 1326 65.36 0 1304019..1305242 + 407 119384083 - Pden_1338 - cobalamin synthesis protein, P47K 1327 68.91 0 1305333..1306001 + 222 119384084 - Pden_1339 - hypothetical protein 1328 69.50 0 1306001..1306318 + 105 119384085 - Pden_1340 - hypothetical protein 1329 67.60 0 1306419..1307921 + 500 119384086 - Pden_1341 - extracellular solute-binding protein 1330 69.22 0 1307918..1308856 + 312 119384087 - Pden_1342 - binding-protein-dependent transport systems inner membrane component 1331 69.82 0 1308853..1309677 + 274 119384088 - Pden_1343 - binding-protein-dependent transport systems inner membrane component 1332 72.09 +1 1309674..1311110 + 478 119384089 - Pden_1344 - ABC transporter related 1333 70.16 0 1312023..1312937 - 304 119384090 - Pden_1346 - methylisocitrate lyase 1334 67.78 0 1312934..1314103 - 389 119384091 - Pden_1347 - methylcitrate synthase 1335 68.37 0 1314114..1315637 - 507 119384092 - Pden_1348 - 2-methylcitrate dehydratase 1336 67.41 0 1315624..1316025 - 133 119384093 - Pden_1349 - thioesterase superfamily protein 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0