version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1088 61.94 -1 1072164..1072523 - 119 119383845 - Pden_1097 - hypothetical protein 1089 65.28 0 1072561..1074150 - 529 119383846 - Pden_1098 - glucose-methanol-choline oxidoreductase 1090 65.42 0 1074342..1075223 + 293 119383847 - Pden_1099 - xylose isomerase domain-containing protein 1091 64.43 0 1075249..1076409 + 386 119383848 - Pden_1100 - major facilitator transporter 1092 65.75 0 1076527..1076964 - 145 119383849 - Pden_1101 - RpiR family transcriptional regulator 1093 61.90 -1 1077084..1077986 - 300 119383850 - Pden_1102 - LysR family transcriptional regulator 1094 64.16 0 1078420..1079778 + 452 119383851 - Pden_1103 - major facilitator transporter 1095 61.42 -1 1079858..1080391 + 177 119383852 - Pden_1104 - 4-vinyl reductase, 4VR 1096 56.96 -2 1080449..1081447 + 332 119383853 - Pden_1105 - peptidase M19, renal dipeptidase 1097 68.12 0 1082126..1082881 + 251 119383854 - Pden_1106 - GntR domain-containing protein 1098 69.68 0 1082878..1083873 + 331 119383855 - Pden_1107 - alcohol dehydrogenase 1099 68.72 0 1083927..1085582 - 551 119383856 - Pden_1108 - acyl-CoA synthetase 1100 70.37 0 1085622..1085837 - 71 119383857 - Pden_1109 - rhodanese-like 1101 63.57 0 1086247..1086537 - 96 119383858 - Pden_1110 - hypothetical protein 1102 64.98 0 1086592..1088076 - 494 119383859 - Pden_1111 - NCS1 nucleoside transporter 1103 66.80 0 1088170..1089639 - 489 119383860 - Pden_1112 - dihydropyrimidinase 1104 67.55 0 1089636..1090886 - 416 119383861 - Pden_1113 - allantoate amidohydrolase 1105 67.80 0 1091275..1092417 + 380 119383862 cofG Pden_1114 - FO synthase subunit 1 1106 66.27 0 1092414..1093670 + 418 119383863 - Pden_1115 - radical SAM domain-containing protein 1107 70.96 +1 1093667..1094620 + 317 119383864 - Pden_1116 - LPPG:FO 2-phospho-L-lactate transferase 1108 72.04 +1 1094617..1095267 + 216 119383865 - Pden_1117 - hypothetical protein 1109 69.51 0 1095264..1096037 + 257 119383866 - Pden_1118 - F420-dependent oxidoreductase, putative 1110 69.21 0 1096034..1096702 + 222 119383867 - Pden_1119 - NADPH-dependent F420 reductase 1111 64.27 0 1096737..1097738 + 333 119383868 - Pden_1120 - luciferase family protein 1112 58.41 -1 1097832..1098497 + 221 119383869 - Pden_1121 - TetR family transcriptional regulator 1113 70.83 +1 1098969..1099472 - 167 119383870 - Pden_1122 - hypothetical protein 1114 69.62 0 1099543..1100151 - 202 119383871 - Pden_1123 - Fis family transcriptional regulator 1115 73.00 +1 1100148..1101599 - 483 119383872 - Pden_1124 - histidine kinase 1116 69.87 0 1101981..1102979 + 332 119383873 - Pden_1125 - ATPase 1117 74.39 +1 1103117..1103815 + 232 119383874 - Pden_1126 - hypothetical protein 1118 74.85 +1 1103802..1104131 + 109 119383875 - Pden_1127 - hypothetical protein 1119 71.50 +1 1104128..1104976 + 282 119383876 - Pden_1128 - von Willebrand factor, type A 1120 72.57 +1 1104973..1105920 + 315 119383877 - Pden_1129 - von Willebrand factor, type A 1121 71.41 +1 1105917..1106528 + 203 119383878 - Pden_1130 - hypothetical protein 1122 71.26 +1 1106522..1107718 + 398 119383879 - Pden_1131 - hypothetical protein 1123 68.93 0 1107943..1108827 - 294 119383880 - Pden_1132 - PRC-barrel containing protein 1124 68.47 0 1108967..1109188 - 73 119383881 - Pden_1133 - hypothetical protein 1125 66.78 0 1109204..1110061 - 285 119383882 - Pden_1134 - short-chain dehydrogenase/reductase SDR 1126 74.53 +1 1110058..1110744 - 228 119383883 - Pden_1135 - hypothetical protein 1127 67.47 0 1110901..1111398 + 165 119383884 - Pden_1136 - hypothetical protein 1128 65.82 0 1111575..1112048 - 157 119383885 - Pden_1137 - ECF subfamily RNA polymerase sigma-24 factor 1129 68.24 0 1112662..1113549 + 295 119383886 - Pden_1138 - helix-turn-helix domain-containing protein 1130 63.55 0 1113565..1115775 + 736 119383887 - Pden_1139 - TonB-dependent siderophore receptor 1131 70.76 0 1115769..1116647 + 292 119383888 - Pden_1140 - periplasmic binding protein 1132 74.43 +1 1116644..1118614 + 656 119383889 - Pden_1141 - iron-hydroxamate transporter permease subunit 1133 69.01 0 1118611..1119378 + 255 119383890 - Pden_1142 - ABC transporter related 1134 66.49 0 1119400..1121097 + 565 119383891 - Pden_1143 - ABC transporter related 1135 66.12 0 1121215..1121577 - 120 119383892 - Pden_1144 - hypothetical protein 1136 67.03 0 1121604..1122161 - 185 119383893 - Pden_1145 - PfpI family intracellular peptidase 1137 67.17 0 1122331..1123320 - 329 119383894 - Pden_1146 - LysR family transcriptional regulator 1138 66.31 0 1123561..1124403 + 280 119383895 - Pden_1147 - extracellular solute-binding protein 1139 67.58 0 1124465..1125124 + 219 119383896 - Pden_1148 - polar amino acid ABC transporter, inner membrane subunit 1140 65.84 0 1125128..1125850 + 240 119383897 - Pden_1149 - polar amino acid ABC transporter, inner membrane subunit 1141 68.52 0 1125898..1126653 + 251 119383898 - Pden_1150 - ABC transporter related 1142 67.98 0 1126673..1127662 + 329 119383899 - Pden_1151 - arginase/agmatinase/formiminoglutamase 1143 67.72 0 1127743..1128501 + 252 119383900 - Pden_1152 - ABC transporter related 1144 73.10 +1 1128513..1129523 + 336 119383901 - Pden_1153 - asparaginase/glutaminase 1145 66.67 0 1129819..1130460 + 213 119383902 - Pden_1154 - hypothetical protein 1146 63.00 0 1130501..1130773 + 90 119383903 - Pden_1155 - hypothetical protein 1147 68.89 0 1131251..1131565 + 104 119383904 - Pden_1157 - periplasmic binding protein 1148 69.70 0 1131562..1132419 + 285 119383905 - Pden_1158 - hypothetical protein 1149 64.61 0 1132445..1132687 + 80 119383906 - Pden_1159 - hypothetical protein 1150 69.70 0 1132706..1133068 - 120 119383907 - Pden_1160 - HPP family protein+B94 1151 67.33 0 1133256..1134461 - 401 119383908 - Pden_1161 - formate dehydrogenase 1152 69.60 0 1134577..1135359 + 260 119383909 - Pden_1162 - arginase/agmatinase/formiminoglutamase 1153 71.43 +1 1135367..1135786 - 139 119383910 - Pden_1163 - NUDIX hydrolase 1154 66.03 0 1136932..1138197 + 421 119383911 - Pden_1166 - major facilitator transporter 1155 70.05 0 1138212..1138949 - 245 119383912 - Pden_1167 - molybdenum ABC transporter, periplasmic molybdate-binding protein 1156 66.10 0 1139024..1140085 + 353 119383913 - Pden_1168 - periplasmic binding protein 1157 70.05 0 1140148..1141122 + 324 119383914 - Pden_1169 - transport system permease protein 1158 71.18 +1 1141115..1141867 + 250 119383915 - Pden_1170 - ABC transporter related 1159 66.81 0 1141928..1144021 - 697 119383916 - Pden_1171 - TonB-dependent receptor 1160 65.24 0 1144375..1144584 + 69 119383917 - Pden_1172 - TOBE domain-containing protein 1161 65.21 0 1144701..1145660 - 319 119383918 - Pden_1173 - LysR family transcriptional regulator 1162 68.60 0 1145826..1147016 + 396 119383919 - Pden_1174 - muconate and chloromuconate cycloisomerases 1163 61.86 -1 1147019..1147309 + 96 119383920 - Pden_1175 - muconolactone delta-isomerase 1164 65.39 0 1147377..1148315 + 312 119383921 - Pden_1176 - catechol 1,2-dioxygenase 1165 62.03 -1 1148433..1149791 + 452 119383922 - Pden_1177 - Rieske (2Fe-2S) domain-containing protein 1166 63.39 0 1149788..1150276 + 162 119383923 - Pden_1178 - 2-chlorobenzoate 1,2-dioxygenase 1167 66.47 0 1150318..1151346 + 342 119383924 - Pden_1179 - oxidoreductase FAD/NAD(P)-binding subunit 1168 69.72 0 1151343..1152128 + 261 119383925 benD Pden_1180 - 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 1169 66.59 0 1152170..1153501 + 443 119383926 - Pden_1181 - major facilitator transporter 1170 66.42 0 1153562..1154359 + 265 119383927 - Pden_1182 - 3-oxoadipate enol-lactonase 1171 64.90 0 1154430..1155110 - 226 119383928 - Pden_1183 - GntR family transcriptional regulator 1172 66.96 0 1155325..1156353 + 342 119383929 - Pden_1184 - proline racemase 1173 69.19 0 1156370..1157320 + 316 119383930 - Pden_1185 - ornithine cyclodeaminase/mu-crystallin 1174 67.26 0 1157466..1158650 - 394 119383931 - Pden_1186 - alcohol dehydrogenase 1175 68.92 0 1158682..1159791 - 369 119383932 - Pden_1187 - mandelate racemase/muconate lactonizing protein 1176 67.23 0 1159855..1160922 - 355 119383933 - Pden_1188 - ferredoxin 1177 63.56 0 1160925..1162277 - 450 119383934 - Pden_1189 - Rieske (2Fe-2S) domain-containing protein 1178 65.41 0 1162292..1163167 + 291 119383935 - Pden_1190 - LysR family transcriptional regulator 1179 70.45 0 1163174..1164652 - 492 119383936 - Pden_1191 - FAD dependent oxidoreductase 1180 72.50 +1 1164649..1165437 - 262 119383937 - Pden_1192 - NADP oxidoreductase, coenzyme F420-dependent 1181 66.67 0 1165434..1166477 - 347 119383938 - Pden_1193 - glycine betaine/L-proline ABC transporter, ATPase subunit 1182 66.44 0 1166470..1167360 - 296 119383939 - Pden_1194 - binding-protein-dependent transport systems inner membrane component 1183 68.96 0 1167437..1168438 - 333 119383940 - Pden_1195 - substrate-binding region of ABC-type glycine betaine transport system 1184 68.53 0 1168970..1169614 - 214 119383941 - Pden_1196 - TetR family transcriptional regulator 1185 67.50 0 1169763..1171799 + 678 119383942 - Pden_1197 - NADH:flavin oxidoreductase/NADH oxidase 1186 66.67 0 1172410..1172922 - 170 119383943 - Pden_1198 - MarR family transcriptional regulator 1187 66.32 0 1173049..1174212 + 387 119383944 - Pden_1199 - amidohydrolase 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.