version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1044 65.17 0 1028486..1029556 + 356 119383801 - Pden_1050 - ABC transporter related 1045 66.06 0 1029578..1031062 + 494 119383802 - Pden_1051 - aldehyde dehydrogenase 1046 65.61 0 1032328..1033653 + 441 119383803 - Pden_1054 - aldehyde dehydrogenase 1047 58.75 -1 1033801..1034103 - 100 119383804 - Pden_1055 - hypothetical protein 1048 64.05 0 1034464..1035075 + 203 119383805 - Pden_1056 - hypothetical protein 1049 68.61 0 1035142..1036530 - 462 119383806 - Pden_1057 - deaminase 1050 70.24 0 1036643..1037509 + 288 119383807 - Pden_1058 - LysR family transcriptional regulator 1051 63.33 0 1037570..1037839 + 89 119383808 - Pden_1059 - hypothetical protein 1052 68.78 0 1037869..1038864 - 331 119383809 - Pden_1060 - glyceraldehyde-3-phosphate dehydrogenase, type I 1053 59.80 -1 1038928..1039539 - 203 119383810 - Pden_1061 - hypothetical protein 1054 62.98 0 1039892..1040434 - 180 119383811 - Pden_1062 - flavin reductase domain-containing protein 1055 60.06 -1 1040964..1041296 + 110 119383812 - Pden_1063 - aspartate racemase-like 1056 68.42 0 1041329..1042243 - 304 119383813 - Pden_1064 - AraC-like transcriptional regulator 1057 66.14 0 1042377..1043132 + 251 119383814 - Pden_1065 - short-chain dehydrogenase/reductase SDR 1058 62.85 0 1043153..1043650 - 165 119383815 - Pden_1066 - hypothetical protein 1059 68.31 0 1043791..1044216 - 141 119383816 - Pden_1067 - OsmC family protein 1060 64.64 0 1044336..1044779 + 147 119383817 - Pden_1068 - MarR family transcriptional regulator 1061 61.70 -1 1044898..1045320 + 140 119383818 - Pden_1069 - hypothetical protein 1062 68.45 0 1045344..1045961 + 205 119383819 - Pden_1070 - regulatory proteins, IclR 1063 67.19 0 1046186..1047334 + 382 119383820 - Pden_1071 - aminotransferase, class V 1064 63.63 0 1047405..1048292 + 295 119383821 - Pden_1072 - extracellular solute-binding protein 1065 67.85 0 1048349..1049110 + 253 119383822 - Pden_1073 - polar amino acid ABC transporter, inner membrane subunit 1066 63.64 0 1049107..1049799 + 230 119383823 - Pden_1074 - polar amino acid ABC transporter, inner membrane subunit 1067 63.35 0 1049814..1050566 + 250 119383824 - Pden_1075 - ABC transporter related 1068 62.79 0 1050707..1051222 - 171 119383825 - Pden_1076 - hypothetical protein 1069 69.10 0 1051385..1052533 + 382 119383826 - Pden_1077 - ABC transporter related 1070 65.12 0 1052524..1053492 + 322 119383827 - Pden_1078 - extracellular solute-binding protein 1071 66.78 0 1053498..1055225 + 575 119383828 - Pden_1079 - binding-protein-dependent transport systems inner membrane component 1072 69.26 0 1055213..1056331 + 372 119383829 - Pden_1080 - beta-lactamase domain-containing protein 1073 69.44 0 1056489..1056848 + 119 119383830 - Pden_1081 - dual specificity protein phosphatase 1074 62.72 0 1056891..1057169 + 92 119383831 - Pden_1082 - hypothetical protein 1075 67.27 0 1057189..1058175 + 328 119383832 - Pden_1083 - beta-lactamase 1076 64.91 0 1058320..1058490 + 56 119383833 - Pden_1084 - conjugal transfer protein 1077 64.41 0 1058907..1060412 - 501 119383834 - Pden_1086 - glucose-methanol-choline oxidoreductase 1078 66.67 0 1060420..1061517 - 365 119383835 - Pden_1087 - ABC transporter related 1079 62.68 0 1061523..1062401 - 292 119383836 - Pden_1088 - binding-protein-dependent transport systems inner membrane component 1080 62.21 -1 1062391..1063287 - 298 119383837 - Pden_1089 - binding-protein-dependent transport systems inner membrane component 1081 65.79 0 1063371..1064624 - 417 119383838 - Pden_1090 - extracellular solute-binding protein 1082 66.13 0 1064693..1066000 - 435 119383839 - Pden_1091 - histidinol dehydrogenase 1083 65.56 0 1066114..1067916 - 600 119383840 - Pden_1092 - thiamine pyrophosphate binding domain-containing protein 1084 61.68 -1 1068069..1068911 + 280 119383841 - Pden_1093 - XRE family transcriptional regulator 1085 61.26 -1 1068972..1069730 + 252 119383842 - Pden_1094 - hypothetical protein 1086 69.30 0 1069750..1071117 + 455 119383843 - Pden_1095 - aspartate ammonia-lyase 1087 71.96 +1 1071142..1072143 + 333 119383844 - Pden_1096 - glycoside hydrolase family 3 protein 1088 61.94 -1 1072164..1072523 - 119 119383845 - Pden_1097 - hypothetical protein 1089 65.28 0 1072561..1074150 - 529 119383846 - Pden_1098 - glucose-methanol-choline oxidoreductase 1090 65.42 0 1074342..1075223 + 293 119383847 - Pden_1099 - xylose isomerase domain-containing protein 1091 64.43 0 1075249..1076409 + 386 119383848 - Pden_1100 - major facilitator transporter 1092 65.75 0 1076527..1076964 - 145 119383849 - Pden_1101 - RpiR family transcriptional regulator 1093 61.90 -1 1077084..1077986 - 300 119383850 - Pden_1102 - LysR family transcriptional regulator 1094 64.16 0 1078420..1079778 + 452 119383851 - Pden_1103 - major facilitator transporter 1095 61.42 -1 1079858..1080391 + 177 119383852 - Pden_1104 - 4-vinyl reductase, 4VR 1096 56.96 -2 1080449..1081447 + 332 119383853 - Pden_1105 - peptidase M19, renal dipeptidase 1097 68.12 0 1082126..1082881 + 251 119383854 - Pden_1106 - GntR domain-containing protein 1098 69.68 0 1082878..1083873 + 331 119383855 - Pden_1107 - alcohol dehydrogenase 1099 68.72 0 1083927..1085582 - 551 119383856 - Pden_1108 - acyl-CoA synthetase 1100 70.37 0 1085622..1085837 - 71 119383857 - Pden_1109 - rhodanese-like 1101 63.57 0 1086247..1086537 - 96 119383858 - Pden_1110 - hypothetical protein 1102 64.98 0 1086592..1088076 - 494 119383859 - Pden_1111 - NCS1 nucleoside transporter 1103 66.80 0 1088170..1089639 - 489 119383860 - Pden_1112 - dihydropyrimidinase 1104 67.55 0 1089636..1090886 - 416 119383861 - Pden_1113 - allantoate amidohydrolase 1105 67.80 0 1091275..1092417 + 380 119383862 cofG Pden_1114 - FO synthase subunit 1 1106 66.27 0 1092414..1093670 + 418 119383863 - Pden_1115 - radical SAM domain-containing protein 1107 70.96 +1 1093667..1094620 + 317 119383864 - Pden_1116 - LPPG:FO 2-phospho-L-lactate transferase 1108 72.04 +1 1094617..1095267 + 216 119383865 - Pden_1117 - hypothetical protein 1109 69.51 0 1095264..1096037 + 257 119383866 - Pden_1118 - F420-dependent oxidoreductase, putative 1110 69.21 0 1096034..1096702 + 222 119383867 - Pden_1119 - NADPH-dependent F420 reductase 1111 64.27 0 1096737..1097738 + 333 119383868 - Pden_1120 - luciferase family protein 1112 58.41 -1 1097832..1098497 + 221 119383869 - Pden_1121 - TetR family transcriptional regulator 1113 70.83 +1 1098969..1099472 - 167 119383870 - Pden_1122 - hypothetical protein 1114 69.62 0 1099543..1100151 - 202 119383871 - Pden_1123 - Fis family transcriptional regulator 1115 73.00 +1 1100148..1101599 - 483 119383872 - Pden_1124 - histidine kinase 1116 69.87 0 1101981..1102979 + 332 119383873 - Pden_1125 - ATPase 1117 74.39 +1 1103117..1103815 + 232 119383874 - Pden_1126 - hypothetical protein 1118 74.85 +1 1103802..1104131 + 109 119383875 - Pden_1127 - hypothetical protein 1119 71.50 +1 1104128..1104976 + 282 119383876 - Pden_1128 - von Willebrand factor, type A 1120 72.57 +1 1104973..1105920 + 315 119383877 - Pden_1129 - von Willebrand factor, type A 1121 71.41 +1 1105917..1106528 + 203 119383878 - Pden_1130 - hypothetical protein 1122 71.26 +1 1106522..1107718 + 398 119383879 - Pden_1131 - hypothetical protein 1123 68.93 0 1107943..1108827 - 294 119383880 - Pden_1132 - PRC-barrel containing protein 1124 68.47 0 1108967..1109188 - 73 119383881 - Pden_1133 - hypothetical protein 1125 66.78 0 1109204..1110061 - 285 119383882 - Pden_1134 - short-chain dehydrogenase/reductase SDR 1126 74.53 +1 1110058..1110744 - 228 119383883 - Pden_1135 - hypothetical protein 1127 67.47 0 1110901..1111398 + 165 119383884 - Pden_1136 - hypothetical protein 1128 65.82 0 1111575..1112048 - 157 119383885 - Pden_1137 - ECF subfamily RNA polymerase sigma-24 factor 1129 68.24 0 1112662..1113549 + 295 119383886 - Pden_1138 - helix-turn-helix domain-containing protein 1130 63.55 0 1113565..1115775 + 736 119383887 - Pden_1139 - TonB-dependent siderophore receptor 1131 70.76 0 1115769..1116647 + 292 119383888 - Pden_1140 - periplasmic binding protein 1132 74.43 +1 1116644..1118614 + 656 119383889 - Pden_1141 - iron-hydroxamate transporter permease subunit 1133 69.01 0 1118611..1119378 + 255 119383890 - Pden_1142 - ABC transporter related 1134 66.49 0 1119400..1121097 + 565 119383891 - Pden_1143 - ABC transporter related 1135 66.12 0 1121215..1121577 - 120 119383892 - Pden_1144 - hypothetical protein 1136 67.03 0 1121604..1122161 - 185 119383893 - Pden_1145 - PfpI family intracellular peptidase 1137 67.17 0 1122331..1123320 - 329 119383894 - Pden_1146 - LysR family transcriptional regulator 1138 66.31 0 1123561..1124403 + 280 119383895 - Pden_1147 - extracellular solute-binding protein 1139 67.58 0 1124465..1125124 + 219 119383896 - Pden_1148 - polar amino acid ABC transporter, inner membrane subunit 1140 65.84 0 1125128..1125850 + 240 119383897 - Pden_1149 - polar amino acid ABC transporter, inner membrane subunit 1141 68.52 0 1125898..1126653 + 251 119383898 - Pden_1150 - ABC transporter related 1142 67.98 0 1126673..1127662 + 329 119383899 - Pden_1151 - arginase/agmatinase/formiminoglutamase 1143 67.72 0 1127743..1128501 + 252 119383900 - Pden_1152 - ABC transporter related 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0