version 1.0
Paracoccus denitrificans PD1222 chromosome 1, complete sequence - 1..2852282 2799 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1004 68.18 0 986933..988714 - 593 119383761 - Pden_1010 - sulfoacetaldehyde acetyltransferase 1005 65.36 0 988911..990215 - 434 119383762 - Pden_1011 - major facilitator transporter 1006 71.58 +1 990373..991899 - 508 119383763 - Pden_1012 - AMP-dependent synthetase and ligase 1007 68.65 0 991896..993305 - 469 119383764 - Pden_1013 - succinate-semialdehyde dehydrogenase (NAD(P)(+)) 1008 62.61 0 993512..994546 + 344 119383765 - Pden_1014 - periplasmic binding protein/LacI transcriptional regulator 1009 53.43 -2 994548..994751 - 67 119383766 - Pden_1015 - ISCc1, transposase OrfB 1010 62.67 0 994798..995172 - 124 119383767 - Pden_1016 - hypothetical protein 1011 62.59 0 995578..996606 + 342 119383768 - Pden_1017 - transposase IS116/IS110/IS902 family protein 1012 62.30 -1 997017..998231 + 404 119383769 - Pden_1018 - creatinase 1013 64.02 0 998293..999084 - 263 119383770 - Pden_1019 - creatininase 1014 68.68 0 999184..1000077 + 297 119383771 - Pden_1020 - LysR family transcriptional regulator 1015 61.79 -1 1000194..1001321 + 375 119383772 - Pden_1021 - spermidine/putrescine ABC transporter, periplasmic binding protein, putative 1016 62.88 0 1001379..1002224 + 281 119383773 - Pden_1022 - binding-protein-dependent transport systems inner membrane component 1017 63.49 0 1002221..1003039 + 272 119383774 - Pden_1023 - binding-protein-dependent transport systems inner membrane component 1018 63.36 0 1003043..1004131 + 362 119383775 - Pden_1024 - ABC transporter related 1019 57.33 -2 1004440..1005285 + 281 119383776 - Pden_1025 - extracellular solute-binding protein 1020 57.66 -2 1005295..1005960 + 221 119383777 - Pden_1026 - polar amino acid ABC transporter, inner membrane subunit 1021 62.65 0 1005950..1006621 + 223 119383778 - Pden_1027 - polar amino acid ABC transporter, inner membrane subunit 1022 60.17 -1 1006618..1007340 + 240 119383779 - Pden_1028 - ABC transporter related 1023 61.63 -1 1007353..1007610 + 85 119383780 - Pden_1029 - hypothetical protein 1024 64.56 0 1007692..1008927 + 411 119383781 - Pden_1030 - major facilitator transporter 1025 66.05 0 1009116..1010735 + 539 119383782 - Pden_1031 - glucose-methanol-choline oxidoreductase 1026 65.92 0 1010907..1011980 + 357 119383783 - Pden_1032 - periplasmic binding protein/LacI transcriptional regulator 1027 67.04 0 1012013..1012810 + 265 119383784 - Pden_1033 - ABC transporter related 1028 67.65 0 1012803..1014017 + 404 119383785 - Pden_1034 - inner-membrane translocator 1029 67.30 0 1014024..1014977 - 317 119383786 - Pden_1035 - LysR family transcriptional regulator 1030 67.71 0 1015071..1016027 + 318 119383787 - Pden_1036 - amidohydrolase 2 1031 66.50 0 1016024..1017241 + 405 119383788 - Pden_1037 - amidohydrolase 1032 68.74 0 1017249..1018118 - 289 119383789 - Pden_1038 - hypothetical protein 1033 63.81 0 1018118..1018432 - 104 119383790 - Pden_1039 - NIPSNAP family protein 1034 67.06 0 1018437..1019198 - 253 119383791 - Pden_1040 - short chain dehydrogenase 1035 66.54 0 1019202..1019999 - 265 119383792 - Pden_1041 - aspartate dehydrogenase 1036 68.30 0 1019996..1020793 - 265 119383793 - Pden_1042 - alpha/beta hydrolase fold 1037 63.74 0 1020799..1021344 - 181 119383794 - Pden_1043 - cupin 2 domain-containing protein 1038 64.75 0 1021341..1023008 - 555 119383795 - Pden_1044 - glucose-methanol-choline oxidoreductase 1039 64.22 0 1023021..1024043 - 340 119383796 - Pden_1045 - proline racemase 1040 61.92 -1 1024119..1025192 - 357 119383797 - Pden_1046 - regulatory protein, LacI 1041 64.44 0 1025338..1026639 + 433 119383798 - Pden_1047 - extracellular solute-binding protein 1042 62.35 -1 1026700..1027626 + 308 119383799 - Pden_1048 - binding-protein-dependent transport systems inner membrane component 1043 63.46 0 1027639..1028481 + 280 119383800 - Pden_1049 - binding-protein-dependent transport systems inner membrane component 1044 65.17 0 1028486..1029556 + 356 119383801 - Pden_1050 - ABC transporter related 1045 66.06 0 1029578..1031062 + 494 119383802 - Pden_1051 - aldehyde dehydrogenase 1046 65.61 0 1032328..1033653 + 441 119383803 - Pden_1054 - aldehyde dehydrogenase 1047 58.75 -1 1033801..1034103 - 100 119383804 - Pden_1055 - hypothetical protein 1048 64.05 0 1034464..1035075 + 203 119383805 - Pden_1056 - hypothetical protein 1049 68.61 0 1035142..1036530 - 462 119383806 - Pden_1057 - deaminase 1050 70.24 0 1036643..1037509 + 288 119383807 - Pden_1058 - LysR family transcriptional regulator 1051 63.33 0 1037570..1037839 + 89 119383808 - Pden_1059 - hypothetical protein 1052 68.78 0 1037869..1038864 - 331 119383809 - Pden_1060 - glyceraldehyde-3-phosphate dehydrogenase, type I 1053 59.80 -1 1038928..1039539 - 203 119383810 - Pden_1061 - hypothetical protein 1054 62.98 0 1039892..1040434 - 180 119383811 - Pden_1062 - flavin reductase domain-containing protein 1055 60.06 -1 1040964..1041296 + 110 119383812 - Pden_1063 - aspartate racemase-like 1056 68.42 0 1041329..1042243 - 304 119383813 - Pden_1064 - AraC-like transcriptional regulator 1057 66.14 0 1042377..1043132 + 251 119383814 - Pden_1065 - short-chain dehydrogenase/reductase SDR 1058 62.85 0 1043153..1043650 - 165 119383815 - Pden_1066 - hypothetical protein 1059 68.31 0 1043791..1044216 - 141 119383816 - Pden_1067 - OsmC family protein 1060 64.64 0 1044336..1044779 + 147 119383817 - Pden_1068 - MarR family transcriptional regulator 1061 61.70 -1 1044898..1045320 + 140 119383818 - Pden_1069 - hypothetical protein 1062 68.45 0 1045344..1045961 + 205 119383819 - Pden_1070 - regulatory proteins, IclR 1063 67.19 0 1046186..1047334 + 382 119383820 - Pden_1071 - aminotransferase, class V 1064 63.63 0 1047405..1048292 + 295 119383821 - Pden_1072 - extracellular solute-binding protein 1065 67.85 0 1048349..1049110 + 253 119383822 - Pden_1073 - polar amino acid ABC transporter, inner membrane subunit 1066 63.64 0 1049107..1049799 + 230 119383823 - Pden_1074 - polar amino acid ABC transporter, inner membrane subunit 1067 63.35 0 1049814..1050566 + 250 119383824 - Pden_1075 - ABC transporter related 1068 62.79 0 1050707..1051222 - 171 119383825 - Pden_1076 - hypothetical protein 1069 69.10 0 1051385..1052533 + 382 119383826 - Pden_1077 - ABC transporter related 1070 65.12 0 1052524..1053492 + 322 119383827 - Pden_1078 - extracellular solute-binding protein 1071 66.78 0 1053498..1055225 + 575 119383828 - Pden_1079 - binding-protein-dependent transport systems inner membrane component 1072 69.26 0 1055213..1056331 + 372 119383829 - Pden_1080 - beta-lactamase domain-containing protein 1073 69.44 0 1056489..1056848 + 119 119383830 - Pden_1081 - dual specificity protein phosphatase 1074 62.72 0 1056891..1057169 + 92 119383831 - Pden_1082 - hypothetical protein 1075 67.27 0 1057189..1058175 + 328 119383832 - Pden_1083 - beta-lactamase 1076 64.91 0 1058320..1058490 + 56 119383833 - Pden_1084 - conjugal transfer protein 1077 64.41 0 1058907..1060412 - 501 119383834 - Pden_1086 - glucose-methanol-choline oxidoreductase 1078 66.67 0 1060420..1061517 - 365 119383835 - Pden_1087 - ABC transporter related 1079 62.68 0 1061523..1062401 - 292 119383836 - Pden_1088 - binding-protein-dependent transport systems inner membrane component 1080 62.21 -1 1062391..1063287 - 298 119383837 - Pden_1089 - binding-protein-dependent transport systems inner membrane component 1081 65.79 0 1063371..1064624 - 417 119383838 - Pden_1090 - extracellular solute-binding protein 1082 66.13 0 1064693..1066000 - 435 119383839 - Pden_1091 - histidinol dehydrogenase 1083 65.56 0 1066114..1067916 - 600 119383840 - Pden_1092 - thiamine pyrophosphate binding domain-containing protein 1084 61.68 -1 1068069..1068911 + 280 119383841 - Pden_1093 - XRE family transcriptional regulator 1085 61.26 -1 1068972..1069730 + 252 119383842 - Pden_1094 - hypothetical protein 1086 69.30 0 1069750..1071117 + 455 119383843 - Pden_1095 - aspartate ammonia-lyase 1087 71.96 +1 1071142..1072143 + 333 119383844 - Pden_1096 - glycoside hydrolase family 3 protein 1088 61.94 -1 1072164..1072523 - 119 119383845 - Pden_1097 - hypothetical protein 1089 65.28 0 1072561..1074150 - 529 119383846 - Pden_1098 - glucose-methanol-choline oxidoreductase 1090 65.42 0 1074342..1075223 + 293 119383847 - Pden_1099 - xylose isomerase domain-containing protein 1091 64.43 0 1075249..1076409 + 386 119383848 - Pden_1100 - major facilitator transporter 1092 65.75 0 1076527..1076964 - 145 119383849 - Pden_1101 - RpiR family transcriptional regulator 1093 61.90 -1 1077084..1077986 - 300 119383850 - Pden_1102 - LysR family transcriptional regulator 1094 64.16 0 1078420..1079778 + 452 119383851 - Pden_1103 - major facilitator transporter 1095 61.42 -1 1079858..1080391 + 177 119383852 - Pden_1104 - 4-vinyl reductase, 4VR 1096 56.96 -2 1080449..1081447 + 332 119383853 - Pden_1105 - peptidase M19, renal dipeptidase 1097 68.12 0 1082126..1082881 + 251 119383854 - Pden_1106 - GntR domain-containing protein 1098 69.68 0 1082878..1083873 + 331 119383855 - Pden_1107 - alcohol dehydrogenase 1099 68.72 0 1083927..1085582 - 551 119383856 - Pden_1108 - acyl-CoA synthetase 1100 70.37 0 1085622..1085837 - 71 119383857 - Pden_1109 - rhodanese-like 1101 63.57 0 1086247..1086537 - 96 119383858 - Pden_1110 - hypothetical protein 1102 64.98 0 1086592..1088076 - 494 119383859 - Pden_1111 - NCS1 nucleoside transporter 1103 66.80 0 1088170..1089639 - 489 119383860 - Pden_1112 - dihydropyrimidinase 66.57 MEAN 4.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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