version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 768 31.32 0 797016..798956 + 646 189183675 priA OTT_0768 - primosomal protein N 769 31.60 0 799272..799559 + 95 189183676 virB3 OTT_0769 - type IV secretion system protein VirB3 770 33.46 0 799570..801987 + 805 189183677 virB4 OTT_0770 - type IV secretion system protein VirB4 771 33.01 0 801987..804434 + 815 189183678 virB6 OTT_0771 - type IV secretion system protein VirB6 772 30.68 0 804456..808343 + 1295 189183679 virB6 OTT_0772 - type IV secretion system protein VirB6 773 32.45 0 808397..811669 + 1090 189183680 virB6 OTT_0773 - type IV secretion system protein VirB6 774 29.55 0 811662..814226 + 854 189183681 virB6 OTT_0774 - type IV secretion system protein VirB6 775 30.62 0 814263..815516 + 417 189183682 proP2 OTT_0775 - proline/betaine transporter 776 30.79 0 815544..817586 + 680 189183683 mutL OTT_0776 - DNA mismatch repair protein MutL1 777 32.29 0 817767..819113 + 448 189183684 gltX1 OTT_0777 - glutamyl-tRNA synthetase 778 31.32 0 819178..820614 + 478 189183685 cysS OTT_0778 - cysteinyl-tRNA synthetase 779 29.19 0 821001..821603 + 200 189183686 - OTT_0779 - transposase 780 33.33 0 822259..822534 + 91 189183687 - OTT_0780 - transposase 781 26.55 -1 822940..823617 + 225 189183688 - OTT_0781 - hypothetical protein 782 28.75 0 823677..825029 + 450 189183689 - OTT_0782 - hypothetical protein 783 27.18 -1 825473..825667 - 64 189183690 - OTT_0783 - transposase 784 28.79 0 825630..825959 - 109 189183691 - OTT_0784 - transposase 785 29.82 0 827027..827197 + 56 189183692 rpmG OTT_0785 - 50S ribosomal protein L33 786 32.41 0 827206..827529 + 107 189183693 rpsP OTT_0786 - 30S ribosomal protein S16 787 32.91 0 829048..829281 + 77 189183694 - OTT_0787 - transposase 788 27.78 -1 829497..829694 + 65 189183695 - OTT_0788 - transposase 789 33.88 0 831455..831820 - 121 189183696 rplT OTT_0789 - 50S ribosomal protein L20 790 36.71 +1 831840..832046 - 68 189183697 rpmI OTT_0790 - 50S ribosomal protein L35 791 29.79 0 832488..834380 + 630 189183698 htpG OTT_0791 - heat shock protein HtpG 792 28.53 0 834545..835711 + 388 189183699 dapE OTT_0792 - succinyl-diaminopimelate desuccinylase 793 31.02 0 835863..837332 + 489 189183700 tig OTT_0793 - trigger factor 794 27.65 -1 837855..839525 - 556 189183701 msbA1 OTT_0794 - multidrug resistance protein 795 30.13 0 839631..840380 - 249 189183702 phoB OTT_0795 - response regulator PhoB 796 28.85 0 840673..841029 + 118 189183703 rpsF OTT_0796 - 30S ribosomal protein S6 797 33.66 0 841075..841383 + 102 189183704 rpsR OTT_0797 - 30S ribosomal protein S18 798 30.23 0 841426..841941 + 171 189183705 rplI OTT_0798 - 50S ribosomal protein L9 799 29.95 0 842108..843583 + 491 189183706 tlc1 OTT_0799 - ADP,ATP carrier protein homolog 800 26.75 -1 844949..845419 - 156 189183707 - OTT_0800 - peroxiredoxin, AhpC/TSA family protein 801 27.70 -1 845428..845853 - 141 189183708 - OTT_0801 - putative integrase 802 25.11 -2 845909..846127 - 72 189183709 - OTT_0802 - putative integrase 803 30.48 0 846650..847210 + 186 189183710 - OTT_0803 - transposase 804 30.95 0 849423..850766 + 447 189183711 - OTT_0804 - hypothetical protein 805 33.69 0 851000..852109 - 369 189183712 trmU OTT_0805 - tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase 806 37.63 +1 852357..852449 + 30 189183713 pccB OTT_0806 - propionyl-CoA carboxylase beta chain precursor 807 33.33 0 852468..852659 + 63 189183714 pccB OTT_0807 - propionyl-CoA carboxylase beta chain precursor 808 33.33 0 852801..852944 + 47 189183715 pccB OTT_0808 - propionyl-CoA carboxylase beta chain precursor 809 29.13 0 853380..853736 + 118 189183716 pccB OTT_0809 - propionyl-CoA carboxylase beta chain precursor 810 29.63 0 853789..854004 + 71 189183717 - OTT_0810 - hypothetical protein 811 27.27 -1 854163..854459 + 98 189183718 - OTT_0811 - hypothetical protein 812 30.74 0 855461..855769 - 102 189183719 - OTT_0812 - transposase 813 27.20 -1 855814..856188 + 124 189183720 - OTT_0813 - transposase 814 31.11 0 856175..856309 + 44 189183721 - OTT_0814 - transposase 815 28.80 0 856366..856740 + 124 189183722 - OTT_0815 - transposase 816 29.98 0 856727..857233 + 168 189183723 - OTT_0816 - transposase 817 29.04 0 857182..857484 - 100 189183724 - OTT_0817 - transposase 818 28.04 -1 858709..860181 - 490 189183725 nuoL2 OTT_0818 - NADH dehydrogenase I chain L 819 28.17 -1 860191..861681 - 496 189183726 nuoN2 OTT_0819 - NADH dehydrogenase I chain N 820 30.10 0 861674..862075 - 133 189183727 - OTT_0820 - hypothetical protein 821 28.74 0 862053..862487 - 144 189183728 - OTT_0821 - multisubunit Na+/H+ antiporter, MnhB subunit 822 29.27 0 862508..863098 - 196 189183729 - OTT_0822 - multisubunit Na+/H+ antiporter, MnhB subunit 823 30.00 0 863095..863424 - 109 189183730 - OTT_0823 - putative Na+/H+ antiporter subunit 824 27.06 -1 863977..864837 - 286 189183731 - OTT_0824 - HAD superfamily protein involved in N-acetyl-glucosamine catabolism 825 33.09 0 864954..867377 + 807 189183732 gyrB OTT_0825 - DNA gyrase subunit B 826 27.62 -1 867416..867940 - 174 189183733 - OTT_0826 - hypothetical protein 827 33.12 0 868246..869664 + 472 189183734 atrC1 OTT_0827 - cationic amino acid transporter-1 828 31.01 0 870801..870929 - 42 189183735 - OTT_0828 - transposase 829 29.81 0 872575..874278 + 567 189183736 - OTT_0829 - 60 kD inner-membrane protein 830 28.21 -1 874275..874898 + 207 189183737 - OTT_0830 - Era/Obg family GTP-binding protein 831 27.49 -1 874846..875787 + 313 189183738 argB OTT_0831 - acetylglutamate kinase 832 27.86 -1 875885..876085 - 66 189183739 - OTT_0832 - transposase 833 29.76 0 876860..877111 - 83 189183740 - OTT_0833 - transposase 834 35.93 +1 877294..880146 - 950 189183741 sca1 OTT_0834 - cell surface antigen 835 31.08 0 880280..880945 - 221 189183742 gmk OTT_0835 - guanylate kinase 836 36.60 +1 881162..881926 - 254 189183743 - OTT_0836 - hypothetical protein 837 29.41 0 882685..883041 - 118 189183744 cutA OTT_0837 - periplasmic divalent cation tolerance protein 838 31.34 0 883099..884451 - 450 189183745 ffh OTT_0838 - signal recognition particle protein 839 28.01 -1 885541..885822 - 93 189183746 - OTT_0839 - hypothetical protein 840 28.33 0 885876..886115 + 79 189183747 xseB OTT_0840 - exodeoxyribonuclease small subunit 841 30.03 0 887229..887531 - 100 189183748 - OTT_0841 - transposase 842 29.30 0 887604..887975 - 123 189183749 - OTT_0842 - transposase 843 32.29 0 888488..889450 + 320 189183750 - OTT_0843 - transposase 844 27.20 -1 890215..890589 + 124 189183751 - OTT_0844 - transposase 845 31.11 0 890576..890710 + 44 189183752 - OTT_0845 - transposase 846 28.80 0 890767..891141 + 124 189183753 - OTT_0846 - transposase 847 29.98 0 891128..891634 + 168 189183754 - OTT_0847 - transposase 848 32.77 0 892171..892347 - 58 189183755 - OTT_0848 - transposase 849 26.84 -1 892729..893406 + 225 189183756 - OTT_0849 - hypothetical protein 850 32.41 0 893470..894870 + 466 189183757 fumC OTT_0850 - fumarate hydratase 851 31.10 0 895036..896514 - 492 189183758 tppB OTT_0851 - tripeptide permease TppB, putative POT family peptide transport protein 852 32.99 0 899766..901238 - 490 189183759 - OTT_0852 - ankyrin repeat-containing protein 13 853 27.40 -1 901633..901851 - 72 189183760 - OTT_0853 - transposase 854 30.31 0 901889..902749 + 286 189183761 - OTT_0854 - transposase 855 34.88 +1 902734..904668 - 644 189183762 - OTT_0855 - putative conjugative transfer protein TraG 856 32.29 0 904751..905713 - 320 189183763 - OTT_0856 - transposase 857 38.39 +2 905890..906225 - 111 189183764 - OTT_0857 - putative conjugative transfer protein TraG 858 32.71 0 906225..906704 - 159 189183765 - OTT_0858 - putative conjugative transfer protein TraH 859 36.83 +1 906899..907528 - 209 189183766 - OTT_0859 - putative conjugative transfer protein TraH 860 35.34 +1 907525..908223 - 232 189183767 - OTT_0860 - putative conjugative transfer protein TraF 861 34.39 0 908220..908504 - 94 189183768 - OTT_0861 - putative conjugative transfer protein TraN 862 29.95 0 908934..909791 + 285 189183769 - OTT_0862 - putative integrase 863 33.60 0 909760..910131 + 123 189183770 - OTT_0863 - putative integrase 864 39.33 +2 910448..910747 - 99 189183771 - OTT_0864 - hypothetical protein 865 34.21 0 910731..911870 + 379 189183772 - OTT_0865 - reverse transcriptase 866 36.91 +1 912283..912897 + 204 189183773 - OTT_0866 - putative conjugative transfer protein TraH 867 38.43 +2 912962..913177 + 71 189183774 - OTT_0867 - putative conjugative transfer protein TraH 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0