version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 594 30.45 0 608870..609424 - 184 189183501 - OTT_0594 - transposase 595 28.16 -1 609448..609756 - 102 189183502 - OTT_0595 - transposase 596 30.43 0 612352..613386 + 344 189183503 pheS OTT_0596 - phenylalanyl-tRNA synthetase alpha chain 597 30.18 0 613383..615824 + 813 189183504 pheT OTT_0597 - phenylalanyl-tRNA synthetase beta chain 598 33.87 0 615911..616840 - 309 189183505 tsf OTT_0598 - translation elongation factor Ts 599 31.97 0 616837..617715 - 292 189183506 rpsB OTT_0599 - 30S ribosomal protein S2 600 29.46 0 618042..618893 - 283 189183507 - OTT_0600 - hypothetical protein 601 31.88 0 618877..620529 - 550 189183508 pepA OTT_0601 - aminopeptidase A 602 35.15 +1 621330..622814 - 494 189183509 - OTT_0602 - ankyrin repeat-containing protein 12_01 603 31.48 0 623609..623878 - 89 189183510 - OTT_0603 - transposase 604 32.30 0 624369..625337 + 322 189183511 - OTT_0604 - transposase 605 34.52 0 625825..627336 + 503 189183512 - OTT_0605 - hypothetical protein 606 29.17 0 627669..627932 + 87 189183513 leuS OTT_0606 - leucyl-tRNA synthetase 607 33.89 0 628176..628889 + 237 189183514 - OTT_0607 - repeat-containing protein A_03 608 29.98 0 628914..629420 - 168 189183515 - OTT_0608 - transposase 609 28.80 0 629407..629781 - 124 189183516 - OTT_0609 - transposase 610 31.11 0 629838..629972 - 44 189183517 - OTT_0610 - transposase 611 27.20 -1 629959..630333 - 124 189183518 - OTT_0611 - transposase 612 29.31 0 630546..630719 + 57 189183519 - OTT_0612 - transposase 613 28.00 -1 630673..631047 + 124 189183520 - OTT_0613 - transposase 614 29.48 0 631070..631432 - 120 189183521 rbfA OTT_0614 - ribosome-binding factor A 615 32.51 0 631463..634003 - 846 189183522 infB OTT_0615 - translation initiation factor IF-2 616 32.00 0 634253..635755 - 500 189183523 nusA OTT_0616 - N utilization substance protein A 617 27.12 -1 635774..636256 - 160 189183524 - OTT_0617 - hypothetical protein 618 28.04 -1 636794..637567 + 257 189183525 ubiE OTT_0618 - ubiquinone/menaquinone biosynthesis methlytransferase UbiE 619 31.10 0 637564..638952 + 462 189183526 ubiB OTT_0619 - ubiquinone biosynthesis protein UbiB 620 32.32 0 639034..639528 + 164 189183527 - OTT_0620 - transposase 621 28.27 -1 639482..639856 + 124 189183528 - OTT_0621 - transposase 622 30.47 0 641860..644685 + 941 189183529 - OTT_0622 - hypothetical protein 623 27.39 -1 645409..646014 - 201 189183530 - OTT_0623 - transposase 624 28.07 -1 648276..650138 - 620 189183531 ccmF OTT_0624 - cytochrome c-type biogenesis protein CcmF 625 29.55 0 650128..651396 - 422 189183532 - OTT_0625 - hemolysin homolog 626 32.08 0 652588..652827 + 79 189183533 - OTT_0626 - hypothetical protein 627 28.82 0 652927..653568 + 213 189183534 sodB OTT_0627 - superoxide dismutase 628 31.09 0 653609..656500 + 963 189183535 sucA OTT_0628 - 2-oxoglutarate dehydrogenase e1 component 629 31.14 0 656500..657777 + 425 189183536 sucB OTT_0629 - dihydrolipoamide acetyltransferase component 630 31.58 0 657783..659261 + 492 189183537 - OTT_0630 - hypothetical protein 631 32.41 0 659554..660855 + 433 189183538 proP5 OTT_0631 - proline/betaine transporter 632 29.50 0 660922..661260 + 112 189183539 - OTT_0632 - hypothetical protein 633 30.42 0 661649..662473 - 274 189183540 coxC OTT_0633 - cytochrome c oxidase subunit III 634 31.80 0 662655..663632 - 325 189183541 ruvB OTT_0634 - holliday junction DNA helicase RuvB 635 31.07 0 663632..664249 - 205 189183542 ruvA OTT_0635 - holliday junction DNA helicase RuvA 636 32.31 0 664493..666634 - 713 189183543 - OTT_0636 - hypothetical protein 637 30.93 0 667002..668207 - 401 189183544 bcr2 OTT_0637 - drug resistance transporter, Bcr/CflA family protein 638 32.29 0 669035..669997 - 320 189183545 - OTT_0638 - transposase 639 32.00 0 670926..674363 + 1145 189183546 - OTT_0639 - sensor histidine kinase/response regulator/transporter hybrid protein 640 31.87 0 674985..676007 + 340 189183547 - OTT_0640 - putative integrase 641 41.95 +2 676408..676848 - 146 189183548 - OTT_0641 - hypothetical protein 642 33.95 0 676832..677971 + 379 189183549 - OTT_0642 - reverse transcriptase 643 33.33 0 678464..678613 + 49 189183550 - OTT_0643 - hypothetical protein 644 33.96 0 678613..678930 + 105 189183551 - OTT_0644 - putative conjugative transfer protein TraE 645 33.88 0 678960..679142 + 60 189183552 - OTT_0645 - putative conjugative transfer protein TraB 646 31.21 0 679142..679471 + 109 189183553 - OTT_0646 - hypothetical protein 647 33.08 0 679380..680177 + 265 189183554 - OTT_0647 - putative conjugative transfer protein TraC 648 36.42 +1 680269..680430 + 53 189183555 - OTT_0648 - putative conjugative transfer protein TraC 649 35.41 +1 680535..681497 + 320 189183556 - OTT_0649 - putative conjugative transfer protein TraC 650 33.50 0 681563..682765 + 400 189183557 - OTT_0650 - putative conjugative transfer protein TraN 651 32.29 0 682781..683743 - 320 189183558 - OTT_0651 - transposase 652 33.85 0 684080..684274 + 64 189183559 - OTT_0652 - putative conjugative transfer protein TraN 653 24.62 -2 684528..685319 + 263 189183560 - OTT_0653 - TPR repeat-containing protein 05 654 31.48 0 685429..686022 + 197 189183561 - OTT_0654 - hypothetical protein 655 32.29 0 686199..687161 + 320 189183562 - OTT_0655 - transposase 656 30.84 0 687177..687737 - 186 189183563 - OTT_0656 - putative transposase 657 31.37 0 687789..688907 - 372 189183564 - OTT_0657 - putative conjugative transfer protein TraI 658 31.13 0 689191..689598 - 135 189183565 - OTT_0658 - putative conjugative transfer protein TraA 659 28.80 0 689592..689966 + 124 189183566 - OTT_0659 - transposase 660 29.98 0 689953..690459 + 168 189183567 - OTT_0660 - transposase 661 33.33 0 690473..690955 - 160 189183568 - OTT_0661 - putative conjugative transfer protein TraA 662 33.08 0 690970..692964 - 664 189183569 - OTT_0662 - putative conjugative transfer protein TraA 663 35.75 +1 693260..693715 + 151 189183570 - OTT_0663 - putative conjugative transfer protein TraD 664 28.31 -1 693809..694345 + 178 189183571 - OTT_0664 - hypothetical protein 665 31.08 0 694372..694947 - 191 189183572 - OTT_0665 - RelA/SpoT-related protein 666 30.30 0 695048..695905 - 285 189183573 - OTT_0666 - hypothetical protein 667 28.94 0 695927..696655 - 242 189183574 - OTT_0667 - hypothetical protein 668 30.26 0 697029..697841 + 270 189183575 - OTT_0668 - N6 adenine-specific DNA-methyltransferase 669 30.50 0 697845..698126 - 93 189183576 - OTT_0669 - hypothetical protein 670 39.00 +2 698383..698682 - 99 189183577 - OTT_0670 - hypothetical protein 671 33.23 0 698666..699649 + 327 189183578 - OTT_0671 - reverse transcriptase 672 30.94 0 700553..701179 - 208 189183579 lipB OTT_0672 - probable lipoate-protein ligase B 673 29.88 0 701262..702680 + 472 189183580 murD OTT_0673 - UDP-N-acetylmuramoylalanine-D-glutamate ligase 674 31.47 0 702687..703814 + 375 189183581 ftsW OTT_0674 - cell division protein FtsW 675 30.65 0 703818..704897 + 359 189183582 murG OTT_0675 - UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 676 31.58 0 705376..705660 + 94 189183583 - OTT_0676 - reverse transcriptase 677 27.73 -1 706682..707056 - 124 189183584 - OTT_0677 - transposase 678 31.64 0 707068..707244 - 58 189183585 - OTT_0678 - transposase 679 30.78 0 707778..708992 - 404 189183586 lysC OTT_0679 - aspartokinase 680 29.92 0 709272..709769 - 165 189183587 - OTT_0680 - hypothetical protein 681 32.87 0 709750..711492 - 580 189183588 kefB OTT_0681 - glutathione-regulated potassium-efflux system protein KefB 682 28.97 0 711665..712237 + 190 189183589 - OTT_0682 - 5-formyltetrahydrofolate cyclo-ligase 683 26.02 -1 712234..712848 + 204 189183590 - OTT_0683 - hypothetical protein 684 33.33 0 712813..712998 - 61 189183591 - OTT_0684 - hypothetical protein 685 32.31 0 713134..713523 - 129 189183592 - OTT_0685 - putative conjugative transfer protein TraC 686 34.75 +1 713589..713729 - 46 189183593 - OTT_0686 - putative conjugative transfer protein TraC 687 33.57 0 713950..714363 + 137 189183594 - OTT_0687 - transposase 688 28.68 0 714645..714773 + 42 189183595 - OTT_0688 - transposase 689 27.38 -1 714880..717465 + 861 189183596 - OTT_0689 - hypothetical protein 690 29.82 0 717506..720010 + 834 189183597 - OTT_0690 - hypothetical protein 691 26.93 -1 719990..720442 - 150 189183598 - OTT_0691 - transposase 692 29.71 0 720442..720717 - 91 189183599 - OTT_0692 - transposase 693 27.96 -1 721944..723023 + 359 189183600 coxW OTT_0693 - cytochrome c oxidase assembly protein 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0