version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 547 37.87 +2 564558..565460 - 300 189183454 - OTT_0547 - putative streptomycin-6-phosphotransferase 548 34.65 +1 565895..567109 - 404 189183455 - OTT_0548 - putative conjugative transfer protein TraI 549 32.82 0 567376..568158 - 260 189183456 - OTT_0549 - putative conjugative transfer protein TraA 550 33.19 0 568215..568925 - 236 189183457 - OTT_0550 - putative conjugative transfer protein TraA 551 33.18 0 568910..570208 - 432 189183458 - OTT_0551 - putative conjugative transfer protein TraA 552 35.53 +1 570504..570959 + 151 189183459 - OTT_0552 - putative conjugative transfer protein TraD 553 30.42 0 571027..571953 - 308 189183460 - OTT_0553 - hypothetical protein 554 30.77 0 572074..572229 - 51 189183461 - OTT_0554 - RelA/SpoT-related protein 555 31.55 0 572269..572661 - 130 189183462 - OTT_0555 - RelA/SpoT-related protein 556 28.89 0 572703..573197 - 164 189183463 - OTT_0556 - hypothetical protein 557 30.74 0 573216..573677 - 153 189183464 - OTT_0557 - hypothetical protein 558 29.68 0 573738..574148 - 136 189183465 - OTT_0558 - hypothetical protein 559 30.06 0 574156..574644 - 162 189183466 - OTT_0559 - hypothetical protein 560 29.76 0 574834..575085 - 83 189183467 - OTT_0560 - hypothetical protein 561 30.63 0 575308..575862 + 184 189183468 - OTT_0561 - hypothetical protein 562 30.49 0 576004..576777 + 257 189183469 - OTT_0562 - hypothetical protein 563 31.28 0 576930..577952 - 340 189183470 - OTT_0563 - replicative DNA helicase 564 31.06 0 577961..579676 - 571 189183471 - OTT_0564 - hypothetical protein 565 28.24 -1 580142..580534 + 130 189183472 - OTT_0565 - transposase 566 31.17 0 580557..580787 + 76 189183473 - OTT_0566 - transposase 567 29.29 0 580741..581037 + 98 189183474 - OTT_0567 - transposase 568 33.04 0 581415..581759 - 114 189183475 - OTT_0568 - putative ferredoxin, 2Fe-2S (andrenodoxin-like) 569 28.86 0 581776..583629 - 617 189183476 hscA OTT_0569 - chaperone protein HscA 570 27.58 -1 583616..584119 - 167 189183477 hscB OTT_0570 - chaperone protein HscB 571 32.00 0 584132..584506 - 124 189183478 hesB2 OTT_0571 - HesB protein 572 34.04 0 584516..584941 - 141 189183479 iscU OTT_0572 - NifU protein homolog 573 32.94 0 584981..586252 - 423 189183480 spl1 OTT_0573 - NifS protein homolog 574 32.25 0 586267..587553 - 428 189183481 spl1 OTT_0574 - NifS protein homolog 575 30.20 0 587565..588011 - 148 189183482 - OTT_0575 - Rrf2 family protein 576 33.90 0 588215..588916 + 233 189183483 - OTT_0576 - hypothetical protein 577 31.09 0 589210..590457 + 415 189183484 ftsA OTT_0577 - cell division protein FtsA 578 30.82 0 590436..591746 + 436 189183485 - OTT_0578 - hypothetical protein 579 27.40 -1 591731..593482 + 583 189183486 - OTT_0579 - hypothetical protein 580 28.77 0 593930..594367 + 145 189183487 - OTT_0580 - transposase 581 33.90 0 594667..594843 - 58 189183488 - OTT_0581 - putative conjugative transfer protein TraD 582 34.18 0 595505..596806 - 433 189183489 tme OTT_0582 - malate oxidoreductase and phosphate acetyltransferase 583 28.16 -1 596826..597752 - 308 189183490 - OTT_0583 - hypothetical protein 584 30.33 0 598061..598660 + 199 189183491 - OTT_0584 - hypothetical protein 585 28.53 0 598789..599100 + 103 189183492 gltA OTT_0585 - citrate synthase 586 29.10 0 599097..599852 - 251 189183493 - OTT_0586 - transposase 587 29.95 0 599966..600172 - 68 189183494 - OTT_0587 - transposase 588 28.64 0 600210..600614 - 134 189183495 atpC OTT_0588 - ATP synthase epsilon chain 589 34.24 0 600611..602047 - 478 189183496 atpD OTT_0589 - ATP synthase beta chain 590 30.53 0 602393..603532 - 379 189183497 capM OTT_0590 - CapM protein 591 30.08 0 603568..604335 + 255 189183498 - OTT_0591 - hypothetical protein 592 29.73 0 604732..606729 - 665 189183499 slt OTT_0592 - soluble lytic murein transglycosylase precursor 593 32.91 0 606771..607709 + 312 189183500 fabD OTT_0593 - malonyl CoA-acyl carrier protein transacylase 594 30.45 0 608870..609424 - 184 189183501 - OTT_0594 - transposase 595 28.16 -1 609448..609756 - 102 189183502 - OTT_0595 - transposase 596 30.43 0 612352..613386 + 344 189183503 pheS OTT_0596 - phenylalanyl-tRNA synthetase alpha chain 597 30.18 0 613383..615824 + 813 189183504 pheT OTT_0597 - phenylalanyl-tRNA synthetase beta chain 598 33.87 0 615911..616840 - 309 189183505 tsf OTT_0598 - translation elongation factor Ts 599 31.97 0 616837..617715 - 292 189183506 rpsB OTT_0599 - 30S ribosomal protein S2 600 29.46 0 618042..618893 - 283 189183507 - OTT_0600 - hypothetical protein 601 31.88 0 618877..620529 - 550 189183508 pepA OTT_0601 - aminopeptidase A 602 35.15 +1 621330..622814 - 494 189183509 - OTT_0602 - ankyrin repeat-containing protein 12_01 603 31.48 0 623609..623878 - 89 189183510 - OTT_0603 - transposase 604 32.30 0 624369..625337 + 322 189183511 - OTT_0604 - transposase 605 34.52 0 625825..627336 + 503 189183512 - OTT_0605 - hypothetical protein 606 29.17 0 627669..627932 + 87 189183513 leuS OTT_0606 - leucyl-tRNA synthetase 607 33.89 0 628176..628889 + 237 189183514 - OTT_0607 - repeat-containing protein A_03 608 29.98 0 628914..629420 - 168 189183515 - OTT_0608 - transposase 609 28.80 0 629407..629781 - 124 189183516 - OTT_0609 - transposase 610 31.11 0 629838..629972 - 44 189183517 - OTT_0610 - transposase 611 27.20 -1 629959..630333 - 124 189183518 - OTT_0611 - transposase 612 29.31 0 630546..630719 + 57 189183519 - OTT_0612 - transposase 613 28.00 -1 630673..631047 + 124 189183520 - OTT_0613 - transposase 614 29.48 0 631070..631432 - 120 189183521 rbfA OTT_0614 - ribosome-binding factor A 615 32.51 0 631463..634003 - 846 189183522 infB OTT_0615 - translation initiation factor IF-2 616 32.00 0 634253..635755 - 500 189183523 nusA OTT_0616 - N utilization substance protein A 617 27.12 -1 635774..636256 - 160 189183524 - OTT_0617 - hypothetical protein 618 28.04 -1 636794..637567 + 257 189183525 ubiE OTT_0618 - ubiquinone/menaquinone biosynthesis methlytransferase UbiE 619 31.10 0 637564..638952 + 462 189183526 ubiB OTT_0619 - ubiquinone biosynthesis protein UbiB 620 32.32 0 639034..639528 + 164 189183527 - OTT_0620 - transposase 621 28.27 -1 639482..639856 + 124 189183528 - OTT_0621 - transposase 622 30.47 0 641860..644685 + 941 189183529 - OTT_0622 - hypothetical protein 623 27.39 -1 645409..646014 - 201 189183530 - OTT_0623 - transposase 624 28.07 -1 648276..650138 - 620 189183531 ccmF OTT_0624 - cytochrome c-type biogenesis protein CcmF 625 29.55 0 650128..651396 - 422 189183532 - OTT_0625 - hemolysin homolog 626 32.08 0 652588..652827 + 79 189183533 - OTT_0626 - hypothetical protein 627 28.82 0 652927..653568 + 213 189183534 sodB OTT_0627 - superoxide dismutase 628 31.09 0 653609..656500 + 963 189183535 sucA OTT_0628 - 2-oxoglutarate dehydrogenase e1 component 629 31.14 0 656500..657777 + 425 189183536 sucB OTT_0629 - dihydrolipoamide acetyltransferase component 630 31.58 0 657783..659261 + 492 189183537 - OTT_0630 - hypothetical protein 631 32.41 0 659554..660855 + 433 189183538 proP5 OTT_0631 - proline/betaine transporter 632 29.50 0 660922..661260 + 112 189183539 - OTT_0632 - hypothetical protein 633 30.42 0 661649..662473 - 274 189183540 coxC OTT_0633 - cytochrome c oxidase subunit III 634 31.80 0 662655..663632 - 325 189183541 ruvB OTT_0634 - holliday junction DNA helicase RuvB 635 31.07 0 663632..664249 - 205 189183542 ruvA OTT_0635 - holliday junction DNA helicase RuvA 636 32.31 0 664493..666634 - 713 189183543 - OTT_0636 - hypothetical protein 637 30.93 0 667002..668207 - 401 189183544 bcr2 OTT_0637 - drug resistance transporter, Bcr/CflA family protein 638 32.29 0 669035..669997 - 320 189183545 - OTT_0638 - transposase 639 32.00 0 670926..674363 + 1145 189183546 - OTT_0639 - sensor histidine kinase/response regulator/transporter hybrid protein 640 31.87 0 674985..676007 + 340 189183547 - OTT_0640 - putative integrase 641 41.95 +2 676408..676848 - 146 189183548 - OTT_0641 - hypothetical protein 642 33.95 0 676832..677971 + 379 189183549 - OTT_0642 - reverse transcriptase 643 33.33 0 678464..678613 + 49 189183550 - OTT_0643 - hypothetical protein 644 33.96 0 678613..678930 + 105 189183551 - OTT_0644 - putative conjugative transfer protein TraE 645 33.88 0 678960..679142 + 60 189183552 - OTT_0645 - putative conjugative transfer protein TraB 646 31.21 0 679142..679471 + 109 189183553 - OTT_0646 - hypothetical protein 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0