version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 438 30.77 0 456995..457852 - 285 189183345 - OTT_0438 - hypothetical protein 439 28.53 0 457874..458602 - 242 189183346 - OTT_0439 - hypothetical protein 440 30.68 0 459503..461008 + 501 189183347 - OTT_0440 - repeat-containing protein B 441 29.07 0 462136..462768 + 210 189183348 - OTT_0441 - N6 adenine-specific DNA-methyltransferase 442 29.02 0 462954..463997 - 347 189183349 - OTT_0442 - hypothetical protein 443 25.36 -1 465724..465861 + 45 189183350 - OTT_0443 - hypothetical protein 444 30.15 0 466557..467531 - 324 189183351 - OTT_0444 - hypothetical protein 445 30.77 0 467653..467808 - 51 189183352 - OTT_0445 - RelA/SpoT-related protein 446 31.55 0 467848..468240 - 130 189183353 - OTT_0446 - RelA/SpoT-related protein 447 32.29 0 468367..469329 - 320 189183354 - OTT_0447 - transposase 448 28.68 0 469506..470021 - 171 189183355 - OTT_0448 - hypothetical protein 449 31.18 0 470040..470504 - 154 189183356 - OTT_0449 - hypothetical protein 450 30.49 0 470565..471056 - 163 189183357 - OTT_0450 - hypothetical protein 451 29.45 0 471271..471939 - 222 189183358 - OTT_0451 - hypothetical protein 452 32.16 0 472460..472885 - 141 189183359 - OTT_0452 - RelA/SpoT-related protein 453 32.08 0 473119..474555 - 478 189183360 - OTT_0453 - replicative DNA helicase 454 29.44 0 475774..476955 + 393 189183361 bcr2 OTT_0454 - drug resistance transporter, Bcr/CflA family protein 455 27.16 -1 477119..477361 - 80 189183362 - OTT_0455 - transposase 456 38.14 +2 478909..479490 + 193 189183363 - OTT_0456 - putative conjugative transfer protein TraU 457 35.17 +1 480120..480446 + 108 189183364 - OTT_0457 - reverse transcriptase 458 29.82 0 480607..481689 - 360 189183365 - OTT_0458 - hypothetical protein 459 34.64 +1 482167..482853 - 228 189183366 - OTT_0459 - ankyrin repeat-containing protein 11 460 29.62 0 484504..486066 - 520 189183367 sca3 OTT_0460 - cell surface antigen 461 29.17 0 486245..486484 + 79 189183368 - OTT_0461 - hypothetical protein 462 27.72 -1 486910..487176 - 88 189183369 - OTT_0462 - hypothetical protein 463 30.98 0 487195..488385 - 396 189183370 - OTT_0463 - hypothetical protein 464 30.26 0 488519..490306 - 595 189183371 - OTT_0464 - hypothetical protein 465 25.52 -1 491052..491243 + 63 189183372 - OTT_0465 - hypothetical protein 466 32.95 0 491475..491735 + 86 189183373 - OTT_0466 - hypothetical protein 467 29.27 0 491777..492145 + 122 189183374 - OTT_0467 - hypothetical protein 468 31.87 0 492154..492633 + 159 189183375 - OTT_0468 - replicative DNA helicase 469 31.90 0 493675..494022 - 115 189183376 - OTT_0469 - repeat-containing protein A_02 470 27.20 -1 494588..494962 + 124 189183377 - OTT_0470 - transposase 471 31.11 0 494949..495083 + 44 189183378 - OTT_0471 - transposase 472 28.80 0 495140..495514 + 124 189183379 - OTT_0472 - transposase 473 29.98 0 495501..496007 + 168 189183380 - OTT_0473 - transposase 474 31.40 0 496971..497747 + 258 189183381 - OTT_0474 - hypothetical protein 475 31.87 0 498155..499177 + 340 189183382 - OTT_0475 - putative integrase 476 39.60 +2 499717..500019 - 100 189183383 - OTT_0476 - hypothetical protein 477 33.95 0 500003..501142 + 379 189183384 - OTT_0477 - reverse transcriptase 478 32.00 0 501636..501785 + 49 189183385 - OTT_0478 - hypothetical protein 479 30.56 0 501785..501928 + 47 189183386 - OTT_0479 - putative conjugative transfer protein TraE 480 30.86 0 502015..502338 + 107 189183387 - OTT_0480 - putative conjugative transfer protein TraE 481 28.38 0 502335..502637 + 100 189183388 - OTT_0481 - hypothetical protein 482 28.57 0 502637..502741 + 34 189183389 - OTT_0482 - hypothetical protein 483 41.67 +2 502841..503080 + 79 189183390 - OTT_0483 - putative conjugative transfer protein TraB 484 35.56 +1 503043..503312 + 89 189183391 - OTT_0484 - putative conjugative transfer protein TraB 485 30.91 0 503312..503641 + 109 189183392 - OTT_0485 - hypothetical protein 486 36.47 +1 503622..505409 + 595 189183393 - OTT_0486 - putative conjugative transfer protein TraC 487 32.08 0 505323..506360 - 345 189183394 - OTT_0487 - ankyrin repeat-containing protein 05_03 488 38.45 +2 506728..507411 + 227 189183395 - OTT_0488 - putative conjugative transfer protein TraU 489 31.15 0 507496..507816 + 106 189183396 - OTT_0489 - putative conjugative transfer protein TrbC 490 29.93 0 507813..508253 + 146 189183397 - OTT_0490 - putative conjugative transfer protein TraN 491 34.42 0 508304..509503 + 399 189183398 - OTT_0491 - putative conjugative transfer protein TraN 492 35.41 +1 509500..510126 + 208 189183399 - OTT_0492 - putative conjugative transfer protein TraF 493 35.71 +1 510202..511503 + 433 189183400 - OTT_0493 - putative conjugative transfer protein TraH 494 37.20 +1 511503..511838 + 111 189183401 - OTT_0494 - putative conjugative transfer protein TraG 495 32.30 0 512009..512977 + 322 189183402 - OTT_0495 - transposase 496 29.27 0 512993..513583 - 196 189183403 - OTT_0496 - putative integrase 497 30.70 0 514551..515081 + 176 189183404 - OTT_0497 - hypothetical protein 498 27.23 -1 515568..515780 + 70 189183405 - OTT_0498 - transposase 499 27.86 -1 516167..516367 + 66 189183406 - OTT_0499 - transposase 500 32.33 0 516888..517385 - 165 189183407 - OTT_0500 - transposase 501 29.89 0 517545..519695 + 716 189183408 uvrD OTT_0501 - DNA helicase II 502 28.59 0 519687..520445 - 252 189183409 - OTT_0502 - transposase 503 27.12 -1 521541..521894 - 117 189183410 - OTT_0503 - transposase 504 27.92 -1 522050..522880 - 276 189183411 - OTT_0504 - hypothetical protein 505 30.37 0 523699..525150 + 483 189183412 - OTT_0505 - sensor histidine kinase/response regulator/transporter hybrid protein 506 30.22 0 525584..528253 + 889 189183413 polA OTT_0506 - DNA polymerase I (POL I) 507 31.72 0 528319..529683 + 454 189183414 - OTT_0507 - GTP-binding protein, Era/Obg family 508 26.02 -1 529692..530375 + 227 189183415 - OTT_0508 - hypothetical protein 509 25.98 -1 530446..531519 + 357 189183416 - OTT_0509 - AFG1-like ATPase 510 27.68 -1 531512..532165 + 217 189183417 tmk OTT_0510 - thymidylate kinase 511 34.08 0 532310..534178 - 622 189183418 gidA OTT_0511 - glucose inhibited division protein A 512 31.46 0 534818..536101 - 427 189183419 - OTT_0512 - hypothetical protein 513 32.67 0 537149..537298 - 49 189183420 - OTT_0513 - putative integrase 514 32.93 0 538046..539551 - 501 189183421 rho OTT_0514 - transcription termination factor Rho 515 27.21 -1 541040..542068 + 342 189183422 hemE OTT_0515 - uroporphyrinogen decarboxylase 516 27.05 -1 542061..543095 + 344 189183423 hemH OTT_0516 - probable ferrochelatase 517 27.36 -1 543104..543538 + 144 189183424 - OTT_0517 - hypothetical protein 518 31.58 0 543957..544184 + 75 189183425 - OTT_0518 - reverse transcriptase 519 28.48 0 544569..544877 + 102 189183426 - OTT_0519 - transposase 520 30.56 0 545689..545868 - 59 189183427 - OTT_0520 - putative conjugative transfer protein TraI 521 33.74 0 545995..546240 - 81 189183428 - OTT_0521 - putative conjugative transfer protein TraI 522 37.48 +1 546374..546880 - 168 189183429 - OTT_0522 - hypothetical protein 523 43.73 +2 547194..547472 - 92 189183430 - OTT_0523 - hypothetical protein 524 41.79 +2 547645..548034 - 129 189183431 - OTT_0524 - hypothetical protein 525 36.52 +1 548044..548577 - 177 189183432 - OTT_0525 - hypothetical protein 526 38.32 +2 548653..549834 - 393 189183433 - OTT_0526 - hypothetical protein 527 40.28 +2 550048..550680 - 210 189183434 - OTT_0527 - hypothetical protein 528 41.67 +2 550680..551087 - 135 189183435 - OTT_0528 - hypothetical protein 529 35.32 +1 551084..551587 - 167 189183436 - OTT_0529 - hypothetical protein 530 38.73 +2 551716..553494 - 592 189183437 - OTT_0530 - ABC transporter permease/ATP-binding protein 531 42.82 +2 553506..554243 - 245 189183438 fabG OTT_0531 - 3-ketoacyl-(acyl-carrier-protein) reductase 532 42.04 +2 554390..554860 + 156 189183439 - OTT_0532 - transcriptional regulator (MarR family) 533 40.84 +2 554857..555882 + 341 189183440 - OTT_0533 - hypothetical protein 534 39.57 +2 556452..556916 + 154 189183441 - OTT_0534 - MutT/nudix family protein 535 40.66 +2 556913..557458 + 181 189183442 - OTT_0535 - hypothetical protein 536 36.93 +1 557472..557888 + 138 189183443 - OTT_0536 - hypothetical protein 537 30.75 0 558342..558728 + 128 189183444 - OTT_0537 - hypothetical protein 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.