version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 385 26.02 -1 399980..400444 - 154 189183292 atpF OTT_0385 - ATP synthase B chain precursor 386 25.10 -2 400457..400954 - 165 189183293 atpX OTT_0386 - ATP synthase B chain 387 36.00 +1 400962..401186 - 74 189183294 atpE OTT_0387 - ATP synthase C chain 388 29.90 0 401242..401970 - 242 189183295 atpB OTT_0388 - ATP synthase A chain 389 25.48 -1 403317..403991 + 224 189183296 - OTT_0389 - hypothetical protein 390 31.86 0 405184..407889 - 901 189183297 ppdK OTT_0390 - phosphate dikinase precursor 391 26.73 -1 409532..410122 + 196 189183298 - OTT_0391 - hypothetical protein 392 29.36 0 410134..411795 + 553 189183299 - OTT_0392 - hypothetical protein 393 31.30 0 412409..413194 + 261 189183300 - OTT_0393 - exodeoxyribonuclease III 394 35.53 +1 413236..413691 - 151 189183301 - OTT_0394 - putative conjugative transfer protein TraD 395 33.26 0 413970..415286 + 438 189183302 - OTT_0395 - putative conjugative transfer protein TraA 396 33.19 0 415271..415981 + 236 189183303 - OTT_0396 - putative conjugative transfer protein TraA 397 33.33 0 415996..416820 + 274 189183304 - OTT_0397 - putative conjugative transfer protein TraA 398 28.93 0 416849..418504 - 551 189183305 - OTT_0398 - ankyrin repeat-containing protein 10_01 399 31.19 0 418665..419783 + 372 189183306 - OTT_0399 - putative conjugative transfer protein TraI 400 33.43 0 419768..420832 + 354 189183307 - OTT_0400 - putative transposase 401 32.76 0 420842..422596 - 584 189183308 - OTT_0401 - putative conjugative transfer protein TraD 402 26.84 -1 422602..423741 - 379 189183309 - OTT_0402 - TPR repeat-containing protein 01_03 403 34.75 +1 423750..426077 - 775 189183310 - OTT_0403 - putative conjugative transfer protein TraG 404 32.29 0 426160..427122 - 320 189183311 - OTT_0404 - transposase 405 37.20 +1 427299..427634 - 111 189183312 - OTT_0405 - putative conjugative transfer protein TraG 406 35.71 +1 427634..428935 - 433 189183313 - OTT_0406 - putative conjugative transfer protein TraH 407 35.41 +1 429011..429637 - 208 189183314 - OTT_0407 - putative conjugative transfer protein TraF 408 34.42 0 429634..430833 - 399 189183315 - OTT_0408 - putative conjugative transfer protein TraN 409 29.93 0 430884..431324 - 146 189183316 - OTT_0409 - putative conjugative transfer protein TraN 410 31.15 0 431321..431641 - 106 189183317 - OTT_0410 - putative conjugative transfer protein TrbC 411 38.45 +2 431726..432409 - 227 189183318 - OTT_0411 - putative conjugative transfer protein TraU 412 32.08 0 432777..433814 + 345 189183319 - OTT_0412 - ankyrin repeat-containing protein 05_02 413 38.27 +2 433728..434882 - 384 189183320 - OTT_0413 - putative conjugative transfer protein TraC 414 30.84 0 434980..435300 - 106 189183321 - OTT_0414 - hypothetical protein 415 35.52 +1 435300..436628 - 442 189183322 - OTT_0415 - putative conjugative transfer protein TraB 416 33.64 0 436671..437000 - 109 189183323 - OTT_0416 - hypothetical protein 417 27.46 -1 437145..437621 - 158 189183324 - OTT_0417 - hypothetical protein 418 30.71 0 437751..438170 - 139 189183325 - OTT_0418 - putative conjugative transfer protein TraE 419 37.04 +1 438170..438493 - 107 189183326 - OTT_0419 - hypothetical protein 420 33.07 0 438829..439212 - 127 189183327 - OTT_0420 - putative integrase 421 28.99 0 439453..439659 - 68 189183328 - OTT_0421 - putative integrase 422 29.68 0 439613..440023 - 136 189183329 - OTT_0422 - putative integrase 423 29.17 0 440441..440800 - 119 189183330 - OTT_0423 - transposase 424 28.91 0 441094..441975 - 293 189183331 spo0J OTT_0424 - Spo0J protein 425 29.95 0 441987..442784 - 265 189183332 soj OTT_0425 - Soj protein 426 24.96 -2 442791..443387 - 198 189183333 gidB OTT_0426 - glucose inhibited division protein B 427 25.26 -1 443533..444300 + 255 189183334 tatC OTT_0427 - sec-independent protein translocase protein TatC 428 31.32 0 444278..445567 + 429 189183335 serS OTT_0428 - seryl-tRNA synthetase 429 28.09 -1 445569..446426 - 285 189183336 - OTT_0429 - hypothetical protein 430 27.20 -1 446793..448325 + 510 189183337 tlc2 OTT_0430 - ADP,ATP carrier protein homolog 431 30.22 0 448378..451047 + 889 189183338 mutS OTT_0431 - DNA mismatch repair protein MutS 432 28.91 0 451126..452052 + 308 189183339 secF OTT_0432 - protein-export membrane protein SecF 433 30.56 0 452468..453115 - 215 189183340 - OTT_0433 - transposase 434 28.84 0 454018..454284 + 88 189183341 - OTT_0434 - transposase 435 28.74 0 454471..454731 - 86 189183342 prfB OTT_0435 - peptide chain release factor RF-2 436 30.51 0 454856..455599 - 247 189183343 - OTT_0436 - alpha/beta hydrolase superfamily protein 437 32.32 0 456541..456738 - 65 189183344 - OTT_0437 - RelA/SpoT-related protein 438 30.77 0 456995..457852 - 285 189183345 - OTT_0438 - hypothetical protein 439 28.53 0 457874..458602 - 242 189183346 - OTT_0439 - hypothetical protein 440 30.68 0 459503..461008 + 501 189183347 - OTT_0440 - repeat-containing protein B 441 29.07 0 462136..462768 + 210 189183348 - OTT_0441 - N6 adenine-specific DNA-methyltransferase 442 29.02 0 462954..463997 - 347 189183349 - OTT_0442 - hypothetical protein 443 25.36 -1 465724..465861 + 45 189183350 - OTT_0443 - hypothetical protein 444 30.15 0 466557..467531 - 324 189183351 - OTT_0444 - hypothetical protein 445 30.77 0 467653..467808 - 51 189183352 - OTT_0445 - RelA/SpoT-related protein 446 31.55 0 467848..468240 - 130 189183353 - OTT_0446 - RelA/SpoT-related protein 447 32.29 0 468367..469329 - 320 189183354 - OTT_0447 - transposase 448 28.68 0 469506..470021 - 171 189183355 - OTT_0448 - hypothetical protein 449 31.18 0 470040..470504 - 154 189183356 - OTT_0449 - hypothetical protein 450 30.49 0 470565..471056 - 163 189183357 - OTT_0450 - hypothetical protein 451 29.45 0 471271..471939 - 222 189183358 - OTT_0451 - hypothetical protein 452 32.16 0 472460..472885 - 141 189183359 - OTT_0452 - RelA/SpoT-related protein 453 32.08 0 473119..474555 - 478 189183360 - OTT_0453 - replicative DNA helicase 454 29.44 0 475774..476955 + 393 189183361 bcr2 OTT_0454 - drug resistance transporter, Bcr/CflA family protein 455 27.16 -1 477119..477361 - 80 189183362 - OTT_0455 - transposase 456 38.14 +2 478909..479490 + 193 189183363 - OTT_0456 - putative conjugative transfer protein TraU 457 35.17 +1 480120..480446 + 108 189183364 - OTT_0457 - reverse transcriptase 458 29.82 0 480607..481689 - 360 189183365 - OTT_0458 - hypothetical protein 459 34.64 +1 482167..482853 - 228 189183366 - OTT_0459 - ankyrin repeat-containing protein 11 460 29.62 0 484504..486066 - 520 189183367 sca3 OTT_0460 - cell surface antigen 461 29.17 0 486245..486484 + 79 189183368 - OTT_0461 - hypothetical protein 462 27.72 -1 486910..487176 - 88 189183369 - OTT_0462 - hypothetical protein 463 30.98 0 487195..488385 - 396 189183370 - OTT_0463 - hypothetical protein 464 30.26 0 488519..490306 - 595 189183371 - OTT_0464 - hypothetical protein 465 25.52 -1 491052..491243 + 63 189183372 - OTT_0465 - hypothetical protein 466 32.95 0 491475..491735 + 86 189183373 - OTT_0466 - hypothetical protein 467 29.27 0 491777..492145 + 122 189183374 - OTT_0467 - hypothetical protein 468 31.87 0 492154..492633 + 159 189183375 - OTT_0468 - replicative DNA helicase 469 31.90 0 493675..494022 - 115 189183376 - OTT_0469 - repeat-containing protein A_02 470 27.20 -1 494588..494962 + 124 189183377 - OTT_0470 - transposase 471 31.11 0 494949..495083 + 44 189183378 - OTT_0471 - transposase 472 28.80 0 495140..495514 + 124 189183379 - OTT_0472 - transposase 473 29.98 0 495501..496007 + 168 189183380 - OTT_0473 - transposase 474 31.40 0 496971..497747 + 258 189183381 - OTT_0474 - hypothetical protein 475 31.87 0 498155..499177 + 340 189183382 - OTT_0475 - putative integrase 476 39.60 +2 499717..500019 - 100 189183383 - OTT_0476 - hypothetical protein 477 33.95 0 500003..501142 + 379 189183384 - OTT_0477 - reverse transcriptase 478 32.00 0 501636..501785 + 49 189183385 - OTT_0478 - hypothetical protein 479 30.56 0 501785..501928 + 47 189183386 - OTT_0479 - putative conjugative transfer protein TraE 480 30.86 0 502015..502338 + 107 189183387 - OTT_0480 - putative conjugative transfer protein TraE 481 28.38 0 502335..502637 + 100 189183388 - OTT_0481 - hypothetical protein 482 28.57 0 502637..502741 + 34 189183389 - OTT_0482 - hypothetical protein 483 41.67 +2 502841..503080 + 79 189183390 - OTT_0483 - putative conjugative transfer protein TraB 484 35.56 +1 503043..503312 + 89 189183391 - OTT_0484 - putative conjugative transfer protein TraB 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0