version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 210 31.64 0 200588..201766 - 392 189183117 - OTT_0210 - ankyrin repeat-containing protein 04_01 211 33.57 0 201923..203614 - 563 189183118 - OTT_0211 - putative conjugative transfer protein TraN 212 31.15 0 203611..203931 - 106 189183119 - OTT_0212 - putative conjugative transfer protein TrbC 213 38.45 +2 204016..204699 - 227 189183120 - OTT_0213 - putative conjugative transfer protein TraU 214 32.08 0 205067..206104 + 345 189183121 - OTT_0214 - ankyrin repeat-containing protein 05_01 215 35.97 +1 206018..207874 - 618 189183122 - OTT_0215 - putative conjugative transfer protein TraC 216 30.91 0 207786..208115 - 109 189183123 - OTT_0216 - hypothetical protein 217 35.56 +1 208115..208384 - 89 189183124 - OTT_0217 - putative conjugative transfer protein TraB 218 36.75 +1 208347..209165 - 272 189183125 - OTT_0218 - putative conjugative transfer protein TraB 219 33.33 0 209484..209813 - 109 189183126 - OTT_0219 - hypothetical protein 220 28.30 -1 210178..210654 - 158 189183127 - OTT_0220 - hypothetical protein 221 31.34 0 210651..211202 - 183 189183128 - OTT_0221 - putative conjugative transfer protein TraE 222 36.61 +1 211202..211537 - 111 189183129 - OTT_0222 - hypothetical protein 223 29.85 0 212022..212912 - 296 189183130 - OTT_0223 - putative integrase 224 30.00 0 213349..213648 + 99 189183131 - OTT_0224 - hypothetical protein 225 36.55 +1 213629..215431 + 600 189183132 - OTT_0225 - putative conjugative transfer protein TraC 226 33.23 0 215330..216340 - 336 189183133 - OTT_0226 - ankyrin repeat-containing protein 06_01 227 37.76 +1 216495..217082 + 195 189183134 - OTT_0227 - putative conjugative transfer protein TraU 228 31.46 0 217167..217487 + 106 189183135 - OTT_0228 - putative conjugative transfer protein TrbC 229 31.77 0 217484..218251 + 255 189183136 - OTT_0229 - putative conjugative transfer protein TraN 230 34.60 0 218540..219172 + 210 189183137 - OTT_0230 - putative conjugative transfer protein TraN 231 26.97 -1 219424..220932 + 502 189183138 - OTT_0231 - TPR repeat-containing protein 03 232 33.78 0 221043..221489 + 148 189183139 - OTT_0232 - hypothetical protein 233 34.74 +1 221766..222332 + 188 189183140 - OTT_0233 - putative conjugative transfer protein TraF 234 30.81 0 222612..222809 - 65 189183141 - OTT_0234 - transposase 235 29.22 0 223065..223721 - 218 189183142 - OTT_0235 - hypothetical protein 236 29.44 0 223718..224077 - 119 189183143 - OTT_0236 - ankyrin repeat-containing protein 03_02 237 29.39 0 224310..224588 - 92 189183144 - OTT_0237 - ankyrin repeat-containing protein 03_03 238 29.89 0 224907..225371 - 154 189183145 - OTT_0238 - hypothetical protein 239 34.19 0 225447..225680 - 77 189183146 - OTT_0239 - hypothetical protein 240 32.52 0 226507..226629 - 40 189183147 - OTT_0240 - hypothetical protein 241 33.33 0 226846..227082 - 78 189183148 - OTT_0241 - putative conjugative transfer protein TraB 242 29.51 0 228229..229719 + 496 189183149 ctaQ OTT_0242 - thermostable carboxypeptidase 243 30.77 0 229824..231191 - 455 189183150 mgtE OTT_0243 - magnesium transporter 244 27.84 -1 231377..232396 - 339 189183151 - OTT_0244 - hypothetical protein 245 31.35 0 232416..234935 - 839 189183152 leuS OTT_0245 - leucyl-tRNA synthetase 246 29.37 0 235555..236286 - 243 189183153 - OTT_0246 - protocatechuate 3,4-dioxygenase beta subunit 247 28.07 -1 237770..239233 - 487 189183154 gppA OTT_0247 - guanosine pentaphosphate phosphohydrolase 248 29.77 0 240017..240409 - 130 189183155 - OTT_0248 - transposase 249 29.23 0 240566..240931 - 121 189183156 - OTT_0249 - transposase 250 28.57 0 241933..242373 - 146 189183157 - OTT_0250 - ankyrin repeat-containing protein 07_01 251 33.68 0 243251..243535 - 94 189183158 - OTT_0251 - replicative DNA helicase 252 31.11 0 243525..244694 - 389 189183159 - OTT_0252 - replicative DNA helicase 253 30.32 0 244703..246262 - 519 189183160 - OTT_0253 - hypothetical protein 254 30.20 0 247713..248063 - 116 189183161 - OTT_0254 - probable sigma(54) modulation protein 255 27.38 -1 248398..249909 + 503 189183162 barA OTT_0255 - histidine kinase sensor protein 256 32.78 0 250660..252114 + 484 189183163 - OTT_0256 - replicative DNA helicase, DnaB 257 32.65 0 252600..253769 - 389 189183164 - OTT_0257 - ankyrin repeat-containing protein 08 258 34.04 0 254704..254988 + 94 189183165 groES OTT_0258 - chaperonin, 10 kDa 259 36.39 +1 255061..256728 + 555 189183166 groEL OTT_0259 - chaperonin, 60 kDa 260 30.81 0 258858..259253 - 131 189183167 acpS OTT_0260 - holo-[acyl carrier protein] synthase 261 31.23 0 259264..261399 - 711 189183168 spoT OTT_0261 - SpoT protein 262 29.97 0 261417..261803 - 128 189183169 - OTT_0262 - hypothetical protein 263 36.03 +1 262153..262893 + 246 189183170 - OTT_0263 - hypothetical protein 264 38.79 +2 263053..263382 + 109 189183171 - OTT_0264 - hypothetical protein 265 28.84 0 263405..263782 + 125 189183172 - OTT_0265 - hypothetical protein 266 31.82 0 263802..264791 + 329 189183173 obg OTT_0266 - GTP-binding protein Obg 267 35.85 +1 265310..265468 + 52 189183174 tatA OTT_0267 - sec-independent protein translocase protein TatA 268 28.57 0 265943..266467 - 174 189183175 - OTT_0268 - hypothetical protein 269 30.32 0 267647..269206 + 519 189183176 - OTT_0269 - hypothetical protein 270 31.53 0 269215..270600 + 461 189183177 - OTT_0270 - replicative DNA helicase 271 28.98 0 270468..270995 - 175 189183178 - OTT_0271 - hypothetical protein 272 33.77 0 273264..274403 - 379 189183179 - OTT_0272 - reverse transcriptase 273 41.35 +2 274516..274827 + 103 189183180 - OTT_0273 - hypothetical protein 274 27.69 -1 275084..275473 - 129 189183181 - OTT_0274 - hypothetical protein 275 33.33 0 276859..277461 + 200 189183182 tdpX1 OTT_0275 - thioredoxin peroxidase 1 276 30.84 0 277504..278664 + 386 189183183 smf OTT_0276 - DNA processing protein Smf 277 32.88 0 279293..279730 + 145 189183184 - OTT_0277 - transposase 278 29.76 0 279742..279993 + 83 189183185 - OTT_0278 - transposase 279 30.12 0 280344..282119 + 591 189183186 dnaG OTT_0279 - DNA primase 280 31.28 0 282103..283950 + 615 189183187 rpoD OTT_0280 - RNA polymerase sigma factor RpoD 281 27.89 -1 284210..284668 + 152 189183188 - OTT_0281 - hypothetical protein 282 31.27 0 284984..285757 + 257 189183189 - OTT_0282 - putative integrase 283 33.56 0 285782..286228 + 148 189183190 - OTT_0283 - putative integrase 284 39.33 +2 286549..286848 - 99 189183191 - OTT_0284 - hypothetical protein 285 28.77 0 286832..287050 + 72 189183192 - OTT_0285 - reverse transcriptase 286 32.29 0 287066..288028 - 320 189183193 - OTT_0286 - transposase 287 34.29 0 288281..289216 + 311 189183194 - OTT_0287 - reverse transcriptase 288 31.16 0 289650..290294 - 214 189183195 - OTT_0288 - ankyrin repeat-containing protein 03_04 289 31.06 0 290332..290727 - 131 189183196 - OTT_0289 - RelA/SpoT-related protein 290 31.75 0 291138..292586 - 482 189183197 - OTT_0290 - replicative DNA helicase 291 31.10 0 292595..293266 - 223 189183198 - OTT_0291 - hypothetical protein 292 29.44 0 294486..296513 - 675 189183199 rne OTT_0292 - ribonuclease E 293 30.03 0 297321..301553 + 1410 189183200 - OTT_0293 - SpoT related protein 294 28.82 0 301994..303985 + 663 189183201 - OTT_0294 - hypothetical protein 295 30.36 0 304277..304579 + 100 189183202 pdhC OTT_0295 - dihydrolipoamide acetyltransferase component 296 35.59 +1 304680..305744 + 354 189183203 mreB OTT_0296 - rod shape-determining protein MreB 297 28.99 0 305751..306602 + 283 189183204 mreC OTT_0297 - rod shape-determining protein MreC 298 31.91 0 307356..308624 + 422 189183205 - OTT_0298 - ankyrin repeat-containing protein 09 299 29.27 0 309141..309386 - 81 189183206 - OTT_0299 - hypothetical protein 300 27.03 -1 310742..312502 - 586 189183207 - OTT_0300 - hypothetical protein 301 33.27 0 312610..314079 - 489 189183208 ntrX OTT_0301 - nitrogen assimilation regulatory protein NtrX 302 28.20 -1 314220..315797 - 525 189183209 ntrY OTT_0302 - nitrogen regulation protein NtrY 303 28.70 0 316464..318512 - 682 189183210 - OTT_0303 - hypothetical protein 304 33.72 0 318669..319436 - 255 189183211 - OTT_0304 - hypothetical protein 305 29.72 0 320345..320842 + 165 189183212 - OTT_0305 - hypothetical protein 306 31.94 0 320851..321282 + 143 189183213 - OTT_0306 - replicative DNA helicase 307 30.39 0 321972..322583 + 203 189183214 - OTT_0307 - putative integrase 308 32.56 0 322562..322948 + 128 189183215 - OTT_0308 - putative integrase 309 36.27 +1 323001..323306 + 101 189183216 - OTT_0309 - hypothetical protein 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0