version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1809 27.83 -1 1838738..1839355 - 205 189184716 glnP OTT_1809 - probable glutamine transport system permease protein GlnP 1810 29.06 0 1840418..1840651 + 77 189184717 - OTT_1810 - transposase 1811 29.26 0 1840780..1841172 + 130 189184718 - OTT_1811 - transposase 1812 30.34 0 1843889..1844155 + 88 189184719 - OTT_1812 - putative integrase 1813 29.08 0 1845397..1845678 + 93 189184720 - OTT_1813 - transposase 1814 33.24 0 1846220..1847338 + 372 189184721 - OTT_1814 - putative integrase 1815 36.61 +1 1847464..1847799 + 111 189184722 - OTT_1815 - hypothetical protein 1816 31.34 0 1847799..1848350 + 183 189184723 - OTT_1816 - putative conjugative transfer protein TraE 1817 28.30 -1 1848347..1848823 + 158 189184724 - OTT_1817 - hypothetical protein 1818 33.04 0 1849188..1849523 + 111 189184725 - OTT_1818 - hypothetical protein 1819 34.91 +1 1849577..1850911 + 444 189184726 - OTT_1819 - putative conjugative transfer protein TraB 1820 30.61 0 1850911..1851204 + 97 189184727 - OTT_1820 - hypothetical protein 1821 36.22 +1 1851185..1853674 + 829 189184728 - OTT_1821 - putative conjugative transfer protein TraC 1822 34.09 0 1853671..1854330 + 219 189184729 - OTT_1822 - putative conjugative transfer protein TraW 1823 30.88 0 1854416..1854619 + 67 189184730 - OTT_1823 - hypothetical protein 1824 39.06 +2 1854623..1855600 + 325 189184731 - OTT_1824 - putative conjugative transfer protein TraU 1825 30.47 0 1855623..1856006 + 127 189184732 - OTT_1825 - putative conjugative transfer protein TrbC 1826 33.92 0 1856003..1857697 + 564 189184733 - OTT_1826 - putative conjugative transfer protein TraN 1827 34.75 +1 1857694..1858398 + 234 189184734 - OTT_1827 - putative conjugative transfer protein TraF 1828 37.47 +1 1858395..1859288 + 297 189184735 - OTT_1828 - putative conjugative transfer protein TraH 1829 32.50 0 1859218..1859697 + 159 189184736 - OTT_1829 - putative conjugative transfer protein TraH 1830 35.08 +1 1859697..1862324 + 875 189184737 - OTT_1830 - putative conjugative transfer protein TraG 1831 27.72 -1 1862337..1863476 + 379 189184738 - OTT_1831 - TPR repeat-containing protein 01_10 1832 32.88 0 1863476..1865230 + 584 189184739 - OTT_1832 - putative conjugative transfer protein TraD 1833 32.75 0 1865232..1866251 - 339 189184740 - OTT_1833 - putative transposase 1834 33.30 0 1866236..1868908 - 890 189184741 - OTT_1834 - putative conjugative transfer protein TraI 1835 33.92 0 1869177..1871543 - 788 189184742 - OTT_1835 - putative conjugative transfer protein TraA 1836 33.58 0 1871607..1872005 - 132 189184743 - OTT_1836 - putative conjugative transfer protein TraA 1837 36.18 +1 1872300..1872755 + 151 189184744 - OTT_1837 - putative conjugative transfer protein TraD 1838 29.62 0 1872823..1873737 - 304 189184745 - OTT_1838 - hypothetical protein 1839 29.19 0 1873948..1874454 - 168 189184746 - OTT_1839 - transposase 1840 31.22 0 1874596..1874784 - 62 189184747 - OTT_1840 - transposase 1841 28.06 -1 1875085..1875672 + 195 189184748 - OTT_1841 - transposase 1842 30.47 0 1876110..1877228 - 372 189184749 - OTT_1842 - hypothetical protein 1843 27.20 -1 1877760..1878134 + 124 189184750 - OTT_1843 - transposase 1844 31.11 0 1878121..1878255 + 44 189184751 - OTT_1844 - transposase 1845 28.80 0 1878312..1878686 + 124 189184752 - OTT_1845 - transposase 1846 29.59 0 1878673..1879179 + 168 189184753 - OTT_1846 - transposase 1847 30.30 0 1879128..1879721 - 197 189184754 - OTT_1847 - RelA/SpoT-related protein 1848 30.19 0 1879857..1880714 - 285 189184755 - OTT_1848 - hypothetical protein 1849 28.52 0 1880698..1881465 - 255 189184756 - OTT_1849 - hypothetical protein 1850 30.75 0 1881822..1882634 + 270 189184757 - OTT_1850 - N6 adenine-specific DNA-methyltransferase 1851 31.18 0 1882638..1883147 - 169 189184758 - OTT_1851 - hypothetical protein 1852 31.02 0 1883248..1883895 - 215 189184759 - OTT_1852 - ankyrin repeat-containing protein 03_15 1853 31.94 0 1883933..1884508 - 191 189184760 - OTT_1853 - RelA/SpoT-related protein 1854 32.08 0 1884742..1886178 - 478 189184761 - OTT_1854 - replicative DNA helicase 1855 31.04 0 1886203..1887249 - 348 189184762 - OTT_1855 - hypothetical protein 1856 28.65 0 1887436..1887969 - 177 189184763 - OTT_1856 - hypothetical protein 1857 29.35 0 1888079..1888957 - 292 189184764 - OTT_1857 - hypothetical protein 1858 30.20 0 1889359..1890219 + 286 189184765 - OTT_1858 - transposase 1859 30.89 0 1893427..1894326 + 299 189184766 - OTT_1859 - hypothetical protein 1860 32.09 0 1894494..1895375 + 293 189184767 - OTT_1860 - hypothetical protein 1861 27.04 -1 1895800..1896117 - 105 189184768 - OTT_1861 - transposase 1862 29.82 0 1896946..1897884 - 312 189184769 rluC OTT_1862 - ribosomal large subunit pseudouridine synthase C 1863 26.80 -1 1897868..1898740 - 290 189184770 holB OTT_1863 - DNA polymerase III delta subunit 1864 30.49 0 1898764..1899291 - 175 189184771 ppa OTT_1864 - inorganic pyrophosphatase 1865 30.09 0 1899377..1899808 - 143 189184772 dksA OTT_1865 - dnaK suppressor protein homolog 1866 28.97 0 1899843..1900781 - 312 189184773 xerC OTT_1866 - integrase/recombinase XerC 1867 32.89 0 1900807..1902150 - 447 189184774 thdF OTT_1867 - tRNA modification GTP-binding protein ThdF (TrmE) 1868 29.35 0 1902232..1907157 + 1641 189184775 - OTT_1868 - NAD-glutamate dehydrogenase 1869 28.36 0 1908088..1908570 + 160 189184776 - OTT_1869 - transposase 1870 28.51 0 1908574..1910355 - 593 189184777 abcT3 OTT_1870 - ABC transporter ATP-binding protein 1871 32.27 0 1910405..1911157 - 250 189184778 pyrH OTT_1871 - uridylate kinase 1872 29.49 0 1911385..1912476 - 363 189184779 mraY OTT_1872 - phospho-N-acetylmuramoyl-pentapeptide- transferase 1873 29.86 0 1912466..1913875 - 469 189184780 murF OTT_1873 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase 1874 30.41 0 1913872..1915341 - 489 189184781 murE OTT_1874 - UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase 1875 29.05 0 1915328..1917079 - 583 189184782 ftsI OTT_1875 - penicillin-binding protein PbpA2 1876 23.62 -2 1917383..1917691 - 102 189184783 - OTT_1876 - hypothetical protein 1877 29.82 0 1917684..1918622 - 312 189184784 mraW OTT_1877 - S-adenosyl-methyltransferase MraW 1878 33.95 0 1918691..1919824 - 377 189184785 dnaJ OTT_1878 - dnaJ protein 1879 35.56 +1 1919913..1921841 - 642 189184786 dnaK OTT_1879 - dnaK protein 1880 29.51 0 1922222..1922509 - 95 189184787 bolA OTT_1880 - BolA protein homolog 1881 32.58 0 1922716..1923513 + 265 189184788 fabI OTT_1881 - enoyl-[acyl carrier protein] reductase 1882 34.21 0 1924190..1925329 - 379 189184789 - OTT_1882 - reverse transcriptase 1883 39.33 +2 1925313..1925612 + 99 189184790 - OTT_1883 - hypothetical protein 1884 30.14 0 1925869..1926150 + 93 189184791 - OTT_1884 - hypothetical protein 1885 29.63 0 1926154..1926963 - 269 189184792 - OTT_1885 - N6 adenine-specific DNA-methyltransferase 1886 28.94 0 1927339..1928067 + 242 189184793 - OTT_1886 - hypothetical protein 1887 30.30 0 1928089..1928946 + 285 189184794 - OTT_1887 - hypothetical protein 1888 32.34 0 1929047..1929247 + 66 189184795 - OTT_1888 - RelA/SpoT-related protein 1889 39.33 +2 1929435..1929734 - 99 189184796 - OTT_1889 - hypothetical protein 1890 33.77 0 1929718..1930857 + 379 189184797 - OTT_1890 - reverse transcriptase 1891 30.64 0 1931142..1931549 + 135 189184798 - OTT_1891 - RelA/SpoT-related protein 1892 29.57 0 1931671..1932573 + 300 189184799 - OTT_1892 - hypothetical protein 1893 35.75 +1 1932641..1933096 - 151 189184800 - OTT_1893 - putative conjugative transfer protein TraD 1894 32.67 0 1933373..1933675 + 100 189184801 - OTT_1894 - putative conjugative transfer protein TraA 1895 34.16 0 1933705..1934796 + 363 189184802 - OTT_1895 - putative conjugative transfer protein TraA 1896 26.54 -1 1934783..1934944 + 53 189184803 - OTT_1896 - putative conjugative transfer protein TraA 1897 31.52 0 1934982..1935533 + 183 189184804 - OTT_1897 - putative conjugative transfer protein TraI 1898 31.02 0 1935585..1936145 + 186 189184805 - OTT_1898 - putative transposase 1899 32.30 0 1936161..1937129 - 322 189184806 - OTT_1899 - transposase 1900 31.27 0 1937340..1937630 + 96 189184807 - OTT_1900 - hypothetical protein 1901 30.28 0 1938003..1938428 - 141 189184808 ndk OTT_1901 - nucleoside diphosphate kinase 1902 28.33 0 1940379..1941518 + 379 189184809 - OTT_1902 - putative integrase 1903 27.18 -1 1941521..1941991 + 156 189184810 - OTT_1903 - peroxiredoxin, AhpC/TSA family protein 1904 36.90 +1 1942059..1942394 + 111 189184811 - OTT_1904 - hypothetical protein 1905 31.34 0 1942394..1942945 + 183 189184812 - OTT_1905 - putative conjugative transfer protein TraE 1906 28.30 -1 1942942..1943418 + 158 189184813 - OTT_1906 - hypothetical protein 1907 33.33 0 1943783..1944112 + 109 189184814 - OTT_1907 - hypothetical protein 1908 36.75 +1 1944431..1945249 + 272 189184815 - OTT_1908 - putative conjugative transfer protein TraB 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0