version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1778 32.62 0 1804127..1804963 + 278 189184685 hemF OTT_1778 - coproporphyrinogen III oxidase precursor 1779 35.67 +1 1805103..1805444 + 113 189184686 - OTT_1779 - hypothetical protein 1780 28.47 0 1806032..1806463 - 143 189184687 - OTT_1780 - transposase 1781 28.57 0 1807476..1808021 + 181 189184688 - OTT_1781 - putative integrase 1782 29.52 0 1808376..1808585 + 69 189184689 - OTT_1782 - putative integrase 1783 28.68 0 1808750..1809673 - 307 189184690 - OTT_1783 - putative integrase 1784 28.57 0 1810607..1810774 - 55 189184691 - OTT_1784 - hypothetical protein 1785 34.68 +1 1810904..1811125 - 73 189184692 - OTT_1785 - hypothetical protein 1786 31.56 0 1811401..1811625 - 74 189184693 rpmE OTT_1786 - 50S ribosomal protein L31 1787 28.82 0 1811635..1811922 - 95 189184694 rpmB OTT_1787 - 50S ribosomal protein L28 1788 27.72 -1 1812167..1813039 + 290 189184695 - OTT_1788 - hypothetical protein 1789 30.63 0 1813057..1814313 + 418 189184696 proP1 OTT_1789 - proline/betaine transporter 1790 35.99 +1 1815042..1815794 + 250 189184697 - OTT_1790 - hypothetical protein 1791 29.79 0 1816173..1817384 - 403 189184698 pbpE OTT_1791 - penicillin-binding protein 4 1792 34.00 0 1817410..1819203 - 597 189184699 aspS OTT_1792 - asparaginyl-tRNA synthetase 1793 34.50 0 1819467..1823657 - 1396 189184700 rpoC OTT_1793 - DNA-directed RNA polymerase beta prime chain 1794 33.45 0 1823774..1827898 - 1374 189184701 rpoB OTT_1794 - DNA-directed RNA polymerase beta chain 1795 33.08 0 1828214..1828603 - 129 189184702 rplL OTT_1795 - 50S ribosomal protein L7/L12 1796 30.98 0 1828625..1829134 - 169 189184703 rplJ OTT_1796 - 50S ribosomal protein L10 1797 32.67 0 1829138..1829887 - 249 189184704 rplA OTT_1797 - 50S ribosomal protein L1 1798 33.78 0 1829891..1830337 - 148 189184705 rplK OTT_1798 - 50S ribosomal protein L11 1799 31.47 0 1830377..1830913 - 178 189184706 nusG OTT_1799 - transcription antitermination protein NusG 1800 31.34 0 1830956..1831156 - 66 189184707 secE OTT_1800 - preprotein translocase SecE subunit 1801 37.55 +1 1831420..1832604 - 394 189184708 tuf OTT_1801 - elongation factor EF-Tu 1802 31.50 0 1832777..1833541 - 254 189184709 plsC OTT_1802 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 1803 31.54 0 1833658..1834269 - 203 189184710 recR OTT_1803 - recombination protein RecR 1804 29.80 0 1834357..1834893 - 178 189184711 - OTT_1804 - putative intracellular septation protein 1805 30.48 0 1834897..1835736 - 279 189184712 - OTT_1805 - high-affinity Fe2+/Pb2+ permease 1806 31.69 0 1835765..1836130 - 121 189184713 - OTT_1806 - hypothetical protein 1807 29.20 0 1836596..1837828 - 410 189184714 - OTT_1807 - hypothetical protein 1808 31.28 0 1838014..1838745 - 243 189184715 glnQ OTT_1808 - glutamine ABC transporter ATP-binding protein GlnQ 1809 27.83 -1 1838738..1839355 - 205 189184716 glnP OTT_1809 - probable glutamine transport system permease protein GlnP 1810 29.06 0 1840418..1840651 + 77 189184717 - OTT_1810 - transposase 1811 29.26 0 1840780..1841172 + 130 189184718 - OTT_1811 - transposase 1812 30.34 0 1843889..1844155 + 88 189184719 - OTT_1812 - putative integrase 1813 29.08 0 1845397..1845678 + 93 189184720 - OTT_1813 - transposase 1814 33.24 0 1846220..1847338 + 372 189184721 - OTT_1814 - putative integrase 1815 36.61 +1 1847464..1847799 + 111 189184722 - OTT_1815 - hypothetical protein 1816 31.34 0 1847799..1848350 + 183 189184723 - OTT_1816 - putative conjugative transfer protein TraE 1817 28.30 -1 1848347..1848823 + 158 189184724 - OTT_1817 - hypothetical protein 1818 33.04 0 1849188..1849523 + 111 189184725 - OTT_1818 - hypothetical protein 1819 34.91 +1 1849577..1850911 + 444 189184726 - OTT_1819 - putative conjugative transfer protein TraB 1820 30.61 0 1850911..1851204 + 97 189184727 - OTT_1820 - hypothetical protein 1821 36.22 +1 1851185..1853674 + 829 189184728 - OTT_1821 - putative conjugative transfer protein TraC 1822 34.09 0 1853671..1854330 + 219 189184729 - OTT_1822 - putative conjugative transfer protein TraW 1823 30.88 0 1854416..1854619 + 67 189184730 - OTT_1823 - hypothetical protein 1824 39.06 +2 1854623..1855600 + 325 189184731 - OTT_1824 - putative conjugative transfer protein TraU 1825 30.47 0 1855623..1856006 + 127 189184732 - OTT_1825 - putative conjugative transfer protein TrbC 1826 33.92 0 1856003..1857697 + 564 189184733 - OTT_1826 - putative conjugative transfer protein TraN 1827 34.75 +1 1857694..1858398 + 234 189184734 - OTT_1827 - putative conjugative transfer protein TraF 1828 37.47 +1 1858395..1859288 + 297 189184735 - OTT_1828 - putative conjugative transfer protein TraH 1829 32.50 0 1859218..1859697 + 159 189184736 - OTT_1829 - putative conjugative transfer protein TraH 1830 35.08 +1 1859697..1862324 + 875 189184737 - OTT_1830 - putative conjugative transfer protein TraG 1831 27.72 -1 1862337..1863476 + 379 189184738 - OTT_1831 - TPR repeat-containing protein 01_10 1832 32.88 0 1863476..1865230 + 584 189184739 - OTT_1832 - putative conjugative transfer protein TraD 1833 32.75 0 1865232..1866251 - 339 189184740 - OTT_1833 - putative transposase 1834 33.30 0 1866236..1868908 - 890 189184741 - OTT_1834 - putative conjugative transfer protein TraI 1835 33.92 0 1869177..1871543 - 788 189184742 - OTT_1835 - putative conjugative transfer protein TraA 1836 33.58 0 1871607..1872005 - 132 189184743 - OTT_1836 - putative conjugative transfer protein TraA 1837 36.18 +1 1872300..1872755 + 151 189184744 - OTT_1837 - putative conjugative transfer protein TraD 1838 29.62 0 1872823..1873737 - 304 189184745 - OTT_1838 - hypothetical protein 1839 29.19 0 1873948..1874454 - 168 189184746 - OTT_1839 - transposase 1840 31.22 0 1874596..1874784 - 62 189184747 - OTT_1840 - transposase 1841 28.06 -1 1875085..1875672 + 195 189184748 - OTT_1841 - transposase 1842 30.47 0 1876110..1877228 - 372 189184749 - OTT_1842 - hypothetical protein 1843 27.20 -1 1877760..1878134 + 124 189184750 - OTT_1843 - transposase 1844 31.11 0 1878121..1878255 + 44 189184751 - OTT_1844 - transposase 1845 28.80 0 1878312..1878686 + 124 189184752 - OTT_1845 - transposase 1846 29.59 0 1878673..1879179 + 168 189184753 - OTT_1846 - transposase 1847 30.30 0 1879128..1879721 - 197 189184754 - OTT_1847 - RelA/SpoT-related protein 1848 30.19 0 1879857..1880714 - 285 189184755 - OTT_1848 - hypothetical protein 1849 28.52 0 1880698..1881465 - 255 189184756 - OTT_1849 - hypothetical protein 1850 30.75 0 1881822..1882634 + 270 189184757 - OTT_1850 - N6 adenine-specific DNA-methyltransferase 1851 31.18 0 1882638..1883147 - 169 189184758 - OTT_1851 - hypothetical protein 1852 31.02 0 1883248..1883895 - 215 189184759 - OTT_1852 - ankyrin repeat-containing protein 03_15 1853 31.94 0 1883933..1884508 - 191 189184760 - OTT_1853 - RelA/SpoT-related protein 1854 32.08 0 1884742..1886178 - 478 189184761 - OTT_1854 - replicative DNA helicase 1855 31.04 0 1886203..1887249 - 348 189184762 - OTT_1855 - hypothetical protein 1856 28.65 0 1887436..1887969 - 177 189184763 - OTT_1856 - hypothetical protein 1857 29.35 0 1888079..1888957 - 292 189184764 - OTT_1857 - hypothetical protein 1858 30.20 0 1889359..1890219 + 286 189184765 - OTT_1858 - transposase 1859 30.89 0 1893427..1894326 + 299 189184766 - OTT_1859 - hypothetical protein 1860 32.09 0 1894494..1895375 + 293 189184767 - OTT_1860 - hypothetical protein 1861 27.04 -1 1895800..1896117 - 105 189184768 - OTT_1861 - transposase 1862 29.82 0 1896946..1897884 - 312 189184769 rluC OTT_1862 - ribosomal large subunit pseudouridine synthase C 1863 26.80 -1 1897868..1898740 - 290 189184770 holB OTT_1863 - DNA polymerase III delta subunit 1864 30.49 0 1898764..1899291 - 175 189184771 ppa OTT_1864 - inorganic pyrophosphatase 1865 30.09 0 1899377..1899808 - 143 189184772 dksA OTT_1865 - dnaK suppressor protein homolog 1866 28.97 0 1899843..1900781 - 312 189184773 xerC OTT_1866 - integrase/recombinase XerC 1867 32.89 0 1900807..1902150 - 447 189184774 thdF OTT_1867 - tRNA modification GTP-binding protein ThdF (TrmE) 1868 29.35 0 1902232..1907157 + 1641 189184775 - OTT_1868 - NAD-glutamate dehydrogenase 1869 28.36 0 1908088..1908570 + 160 189184776 - OTT_1869 - transposase 1870 28.51 0 1908574..1910355 - 593 189184777 abcT3 OTT_1870 - ABC transporter ATP-binding protein 1871 32.27 0 1910405..1911157 - 250 189184778 pyrH OTT_1871 - uridylate kinase 1872 29.49 0 1911385..1912476 - 363 189184779 mraY OTT_1872 - phospho-N-acetylmuramoyl-pentapeptide- transferase 1873 29.86 0 1912466..1913875 - 469 189184780 murF OTT_1873 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase 1874 30.41 0 1913872..1915341 - 489 189184781 murE OTT_1874 - UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelate ligase 1875 29.05 0 1915328..1917079 - 583 189184782 ftsI OTT_1875 - penicillin-binding protein PbpA2 1876 23.62 -2 1917383..1917691 - 102 189184783 - OTT_1876 - hypothetical protein 1877 29.82 0 1917684..1918622 - 312 189184784 mraW OTT_1877 - S-adenosyl-methyltransferase MraW 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0