version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1710 33.79 0 1733586..1734245 + 219 189184617 - OTT_1710 - putative conjugative transfer protein TraW 1711 29.41 0 1734332..1734535 + 67 189184618 - OTT_1711 - hypothetical protein 1712 38.55 +2 1734536..1735513 + 325 189184619 - OTT_1712 - putative conjugative transfer protein TraU 1713 29.95 0 1735536..1735919 + 127 189184620 - OTT_1713 - putative conjugative transfer protein TrbC 1714 33.63 0 1735916..1737607 + 563 189184621 - OTT_1714 - putative conjugative transfer protein TraN 1715 35.19 +1 1737604..1738302 + 232 189184622 - OTT_1715 - putative conjugative transfer protein TraF 1716 37.30 +1 1738299..1738928 + 209 189184623 - OTT_1716 - putative conjugative transfer protein TraH 1717 35.36 +1 1738978..1739322 + 114 189184624 - OTT_1717 - putative conjugative transfer protein TraH 1718 28.80 0 1739379..1739753 + 124 189184625 - OTT_1718 - transposase 1719 29.98 0 1739740..1740246 + 168 189184626 - OTT_1719 - transposase 1720 35.21 +1 1740356..1740568 + 70 189184627 - OTT_1720 - putative conjugative transfer protein TraH 1721 37.20 +1 1740568..1740903 + 111 189184628 - OTT_1721 - putative conjugative transfer protein TraG 1722 32.29 0 1741080..1742042 + 320 189184629 - OTT_1722 - transposase 1723 31.80 0 1742657..1745908 + 1083 189184630 - OTT_1723 - sensor histidine kinase/response regulator/transporter hybrid protein 1724 30.63 0 1746029..1746991 - 320 189184631 - OTT_1724 - hypothetical protein 1725 30.03 0 1747113..1747688 - 191 189184632 - OTT_1725 - RelA/SpoT-related protein 1726 30.30 0 1747789..1748646 - 285 189184633 - OTT_1726 - hypothetical protein 1727 28.94 0 1748668..1749396 - 242 189184634 - OTT_1727 - hypothetical protein 1728 29.63 0 1749772..1750581 + 269 189184635 - OTT_1728 - N6 adenine-specific DNA-methyltransferase 1729 31.88 0 1750585..1751133 - 182 189184636 - OTT_1729 - hypothetical protein 1730 30.77 0 1751181..1751648 - 155 189184637 - OTT_1730 - ankyrin repeat-containing protein 03_14 1731 31.94 0 1752043..1753479 - 478 189184638 - OTT_1731 - replicative DNA helicase 1732 29.15 0 1753488..1754681 - 397 189184639 - OTT_1732 - hypothetical protein 1733 36.64 +1 1754757..1755452 - 231 189184640 - OTT_1733 - putative conjugative transfer protein TraH 1734 34.21 0 1755442..1755555 - 37 189184641 - OTT_1734 - putative conjugative transfer protein TraH 1735 27.99 -1 1755631..1756023 - 130 189184642 - OTT_1735 - putative integrase 1736 34.68 +1 1756606..1756902 - 98 189184643 - OTT_1736 - reverse transcriptase 1737 28.90 0 1757661..1758449 - 262 189184644 znuB OTT_1737 - zinc/manganese ABC transporter permease protein 1738 30.39 0 1758430..1759143 - 237 189184645 znuC OTT_1738 - zinc/manganese ABC transporter ATP-binding protein 1739 31.55 0 1759413..1759973 - 186 189184646 - OTT_1739 - hypothetical protein 1740 31.01 0 1759985..1761664 - 559 189184647 dnaX OTT_1740 - DNA polymerase III gamma and tau chains 1741 31.36 0 1762740..1765223 + 827 189184648 sca2 OTT_1741 - putative cell surface antigen 1742 28.32 -1 1765315..1766790 - 491 189184649 - OTT_1742 - hypothetical protein 1743 32.53 0 1766849..1768219 - 456 189184650 xseA OTT_1743 - exodeoxyribonuclease large subunit 1744 29.73 0 1768415..1769164 - 249 189184651 phnP OTT_1744 - PhnP protein 1745 27.35 -1 1769269..1769937 + 222 189184652 - OTT_1745 - putative membrane-associated phospholipid phosphatase 1746 30.89 0 1770075..1770401 + 108 189184653 rplU OTT_1746 - 50S ribosomal protein L21 1747 32.59 0 1770442..1770711 + 89 189184654 rpmA OTT_1747 - 50S ribosomal protein L27 1748 30.39 0 1772829..1773032 + 67 189184655 - OTT_1748 - transposase 1749 34.64 +1 1775964..1776116 + 50 189184656 - OTT_1749 - putative conjugative transfer protein TraC 1750 32.59 0 1776106..1776240 + 44 189184657 - OTT_1750 - putative conjugative transfer protein TraC 1751 34.96 +1 1777438..1778115 + 225 189184658 - OTT_1751 - putative integrase 1752 36.73 +1 1778253..1778576 + 107 189184659 - OTT_1752 - hypothetical protein 1753 31.70 0 1778576..1779127 + 183 189184660 - OTT_1753 - putative conjugative transfer protein TraE 1754 30.19 0 1779124..1779600 + 158 189184661 - OTT_1754 - hypothetical protein 1755 34.23 0 1779745..1780077 + 110 189184662 - OTT_1755 - hypothetical protein 1756 32.07 0 1780131..1780526 + 131 189184663 - OTT_1756 - putative conjugative transfer protein TraB 1757 29.43 0 1780620..1781003 + 127 189184664 - OTT_1757 - hypothetical protein 1758 28.80 0 1781335..1781709 + 124 189184665 - OTT_1758 - transposase 1759 29.98 0 1781696..1782202 + 168 189184666 - OTT_1759 - transposase 1760 28.32 -1 1782279..1782617 + 112 189184667 - OTT_1760 - transposase 1761 29.55 0 1782823..1783086 + 87 189184668 - OTT_1761 - hypothetical protein 1762 28.57 0 1783128..1783715 + 195 189184669 - OTT_1762 - RelA/SpoT-related protein 1763 31.90 0 1784521..1784730 + 69 189184670 - OTT_1763 - exodeoxyribonuclease III 1764 28.23 -1 1785167..1785715 - 182 189184671 pgsA OTT_1764 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1765 33.33 0 1786278..1786715 - 145 189184672 - OTT_1765 - transposase 1766 33.16 0 1787957..1790218 + 753 189184673 - OTT_1766 - outer membrane protein 1767 31.52 0 1790708..1794355 + 1215 189184674 - OTT_1767 - hypothetical protein 1768 27.99 -1 1794710..1795027 - 105 189184675 - OTT_1768 - transposase 1769 26.67 -1 1795015..1795119 - 34 189184676 - OTT_1769 - transposase 1770 26.75 -1 1795232..1795474 - 80 189184677 - OTT_1770 - transposase 1771 30.11 0 1796361..1797602 - 413 189184678 tyrS OTT_1771 - tyrosyl-tRNA synthetase 1772 30.25 0 1798745..1799101 + 118 189184679 - OTT_1772 - hypothetical protein 1773 29.17 0 1799261..1799476 + 71 189184680 - OTT_1773 - hypothetical protein 1774 34.78 +1 1799686..1800030 + 114 189184681 - OTT_1774 - putative conjugative transfer protein TraC 1775 29.77 0 1800972..1801280 + 102 189184682 - OTT_1775 - transposase 1776 31.26 0 1801406..1802323 - 305 189184683 sohB OTT_1776 - SohB protease 1777 33.04 0 1802614..1803963 + 449 189184684 miaB OTT_1777 - tRNA-methylthiotransferase MiaB protein 1778 32.62 0 1804127..1804963 + 278 189184685 hemF OTT_1778 - coproporphyrinogen III oxidase precursor 1779 35.67 +1 1805103..1805444 + 113 189184686 - OTT_1779 - hypothetical protein 1780 28.47 0 1806032..1806463 - 143 189184687 - OTT_1780 - transposase 1781 28.57 0 1807476..1808021 + 181 189184688 - OTT_1781 - putative integrase 1782 29.52 0 1808376..1808585 + 69 189184689 - OTT_1782 - putative integrase 1783 28.68 0 1808750..1809673 - 307 189184690 - OTT_1783 - putative integrase 1784 28.57 0 1810607..1810774 - 55 189184691 - OTT_1784 - hypothetical protein 1785 34.68 +1 1810904..1811125 - 73 189184692 - OTT_1785 - hypothetical protein 1786 31.56 0 1811401..1811625 - 74 189184693 rpmE OTT_1786 - 50S ribosomal protein L31 1787 28.82 0 1811635..1811922 - 95 189184694 rpmB OTT_1787 - 50S ribosomal protein L28 1788 27.72 -1 1812167..1813039 + 290 189184695 - OTT_1788 - hypothetical protein 1789 30.63 0 1813057..1814313 + 418 189184696 proP1 OTT_1789 - proline/betaine transporter 1790 35.99 +1 1815042..1815794 + 250 189184697 - OTT_1790 - hypothetical protein 1791 29.79 0 1816173..1817384 - 403 189184698 pbpE OTT_1791 - penicillin-binding protein 4 1792 34.00 0 1817410..1819203 - 597 189184699 aspS OTT_1792 - asparaginyl-tRNA synthetase 1793 34.50 0 1819467..1823657 - 1396 189184700 rpoC OTT_1793 - DNA-directed RNA polymerase beta prime chain 1794 33.45 0 1823774..1827898 - 1374 189184701 rpoB OTT_1794 - DNA-directed RNA polymerase beta chain 1795 33.08 0 1828214..1828603 - 129 189184702 rplL OTT_1795 - 50S ribosomal protein L7/L12 1796 30.98 0 1828625..1829134 - 169 189184703 rplJ OTT_1796 - 50S ribosomal protein L10 1797 32.67 0 1829138..1829887 - 249 189184704 rplA OTT_1797 - 50S ribosomal protein L1 1798 33.78 0 1829891..1830337 - 148 189184705 rplK OTT_1798 - 50S ribosomal protein L11 1799 31.47 0 1830377..1830913 - 178 189184706 nusG OTT_1799 - transcription antitermination protein NusG 1800 31.34 0 1830956..1831156 - 66 189184707 secE OTT_1800 - preprotein translocase SecE subunit 1801 37.55 +1 1831420..1832604 - 394 189184708 tuf OTT_1801 - elongation factor EF-Tu 1802 31.50 0 1832777..1833541 - 254 189184709 plsC OTT_1802 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 1803 31.54 0 1833658..1834269 - 203 189184710 recR OTT_1803 - recombination protein RecR 1804 29.80 0 1834357..1834893 - 178 189184711 - OTT_1804 - putative intracellular septation protein 1805 30.48 0 1834897..1835736 - 279 189184712 - OTT_1805 - high-affinity Fe2+/Pb2+ permease 1806 31.69 0 1835765..1836130 - 121 189184713 - OTT_1806 - hypothetical protein 1807 29.20 0 1836596..1837828 - 410 189184714 - OTT_1807 - hypothetical protein 1808 31.28 0 1838014..1838745 - 243 189184715 glnQ OTT_1808 - glutamine ABC transporter ATP-binding protein GlnQ 1809 27.83 -1 1838738..1839355 - 205 189184716 glnP OTT_1809 - probable glutamine transport system permease protein GlnP 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0