version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1648 36.64 +1 1680944..1681336 - 130 189184555 - OTT_1648 - hypothetical protein 1649 29.59 0 1681748..1682362 - 204 189184556 - OTT_1649 - RelA/SpoT-related protein 1650 29.29 0 1682646..1683041 - 131 189184557 - OTT_1650 - transposase 1651 29.84 0 1683136..1683507 - 123 189184558 - OTT_1651 - transposase 1652 36.61 +1 1683949..1684284 + 111 189184559 - OTT_1652 - hypothetical protein 1653 30.70 0 1684284..1684700 + 138 189184560 - OTT_1653 - putative conjugative transfer protein TraE 1654 31.07 0 1684642..1684818 + 58 189184561 - OTT_1654 - RelA/SpoT-related protein 1655 30.10 0 1684940..1685866 + 308 189184562 - OTT_1655 - hypothetical protein 1656 29.18 0 1686162..1687052 - 296 189184563 - OTT_1656 - hypothetical protein 1657 33.86 0 1687328..1688467 - 379 189184564 - OTT_1657 - reverse transcriptase 1658 39.45 +2 1688451..1688777 + 108 189184565 - OTT_1658 - hypothetical protein 1659 28.87 0 1688977..1689267 + 96 189184566 - OTT_1659 - hypothetical protein 1660 31.43 0 1689495..1689968 + 157 189184567 - OTT_1660 - hypothetical protein 1661 30.14 0 1689991..1690929 + 312 189184568 - OTT_1661 - hypothetical protein 1662 28.89 0 1690948..1691442 + 164 189184569 - OTT_1662 - hypothetical protein 1663 31.55 0 1691484..1691876 + 130 189184570 - OTT_1663 - RelA/SpoT-related protein 1664 30.77 0 1691916..1692071 + 51 189184571 - OTT_1664 - RelA/SpoT-related protein 1665 31.53 0 1692193..1693191 + 332 189184572 - OTT_1665 - hypothetical protein 1666 37.50 +1 1693259..1693522 - 87 189184573 - OTT_1666 - putative conjugative transfer protein TraD 1667 29.05 0 1693887..1694960 - 357 189184574 - OTT_1667 - TPR repeat-containing protein 08 1668 37.50 +1 1695308..1695547 - 79 189184575 - OTT_1668 - putative conjugative transfer protein TraD 1669 30.00 0 1695716..1696135 + 139 189184576 - OTT_1669 - hypothetical protein 1670 30.50 0 1696158..1697111 + 317 189184577 - OTT_1670 - hypothetical protein 1671 28.57 0 1697158..1697409 + 83 189184578 - OTT_1671 - hypothetical protein 1672 34.86 +1 1697482..1697940 - 152 189184579 - OTT_1672 - putative conjugative transfer protein TraD 1673 33.38 0 1698219..1700231 + 670 189184580 - OTT_1673 - putative conjugative transfer protein TraA 1674 34.90 +1 1700246..1700437 + 63 189184581 - OTT_1674 - putative conjugative transfer protein TraA 1675 35.88 +1 1700473..1700865 + 130 189184582 - OTT_1675 - putative conjugative transfer protein TraI 1676 31.17 0 1700851..1701498 - 215 189184583 - OTT_1676 - putative transposase 1677 31.47 0 1701550..1702620 - 356 189184584 - OTT_1677 - putative conjugative transfer protein TraI 1678 33.45 0 1702951..1704699 - 582 189184585 - OTT_1678 - putative conjugative transfer protein TraA 1679 33.63 0 1704741..1705757 - 338 189184586 - OTT_1679 - putative conjugative transfer protein TraA 1680 36.18 +1 1706035..1706490 + 151 189184587 - OTT_1680 - putative conjugative transfer protein TraD 1681 29.10 0 1706582..1707124 + 180 189184588 - OTT_1681 - hypothetical protein 1682 28.43 0 1707210..1707515 - 101 189184589 - OTT_1682 - RelA/SpoT-related protein 1683 33.68 0 1707902..1709041 - 379 189184590 - OTT_1683 - reverse transcriptase 1684 30.75 0 1709642..1710841 - 399 189184591 - OTT_1684 - putative integrase 1685 32.58 0 1711409..1711675 + 88 189184592 - OTT_1685 - hypothetical protein 1686 30.95 0 1711741..1711992 + 83 189184593 - OTT_1686 - hypothetical protein 1687 37.80 +2 1712235..1712726 + 163 189184594 - OTT_1687 - hypothetical protein 1688 29.87 0 1712765..1713514 - 249 189184595 - OTT_1688 - Predicted sulfurtransferase 1689 26.57 -1 1713625..1714260 - 211 189184596 - OTT_1689 - hypothetical protein 1690 28.99 0 1714716..1714853 - 45 189184597 - OTT_1690 - transposase 1691 31.26 0 1715274..1716428 - 384 189184598 - OTT_1691 - hypothetical protein 1692 33.33 0 1717016..1717138 + 40 189184599 - OTT_1692 - hypothetical protein 1693 32.58 0 1719514..1719780 + 88 189184600 - OTT_1693 - reverse transcriptase 1694 41.50 +2 1719880..1720320 - 146 189184601 - OTT_1694 - hypothetical protein 1695 33.86 0 1720304..1721443 + 379 189184602 - OTT_1695 - reverse transcriptase 1696 31.16 0 1721877..1722521 - 214 189184603 - OTT_1696 - ankyrin repeat-containing protein 03_13 1697 31.06 0 1722559..1722954 - 131 189184604 - OTT_1697 - RelA/SpoT-related protein 1698 31.73 0 1723365..1724801 - 478 189184605 - OTT_1698 - replicative DNA helicase 1699 31.10 0 1724810..1725481 - 223 189184606 - OTT_1699 - hypothetical protein 1700 30.83 0 1726048..1727247 + 399 189184607 - OTT_1700 - putative integrase 1701 36.61 +1 1727368..1727703 + 111 189184608 - OTT_1701 - hypothetical protein 1702 31.34 0 1727703..1728254 + 183 189184609 - OTT_1702 - putative conjugative transfer protein TraE 1703 28.30 -1 1728251..1728727 + 158 189184610 - OTT_1703 - hypothetical protein 1704 33.33 0 1729092..1729421 + 109 189184611 - OTT_1704 - hypothetical protein 1705 36.63 +1 1729740..1730558 + 272 189184612 - OTT_1705 - putative conjugative transfer protein TraB 1706 35.56 +1 1730521..1730790 + 89 189184613 - OTT_1706 - putative conjugative transfer protein TraB 1707 30.91 0 1730790..1731119 + 109 189184614 - OTT_1707 - hypothetical protein 1708 35.77 +1 1731100..1733112 + 670 189184615 - OTT_1708 - putative conjugative transfer protein TraC 1709 34.95 +1 1733281..1733589 + 102 189184616 - OTT_1709 - putative conjugative transfer protein TraC 1710 33.79 0 1733586..1734245 + 219 189184617 - OTT_1710 - putative conjugative transfer protein TraW 1711 29.41 0 1734332..1734535 + 67 189184618 - OTT_1711 - hypothetical protein 1712 38.55 +2 1734536..1735513 + 325 189184619 - OTT_1712 - putative conjugative transfer protein TraU 1713 29.95 0 1735536..1735919 + 127 189184620 - OTT_1713 - putative conjugative transfer protein TrbC 1714 33.63 0 1735916..1737607 + 563 189184621 - OTT_1714 - putative conjugative transfer protein TraN 1715 35.19 +1 1737604..1738302 + 232 189184622 - OTT_1715 - putative conjugative transfer protein TraF 1716 37.30 +1 1738299..1738928 + 209 189184623 - OTT_1716 - putative conjugative transfer protein TraH 1717 35.36 +1 1738978..1739322 + 114 189184624 - OTT_1717 - putative conjugative transfer protein TraH 1718 28.80 0 1739379..1739753 + 124 189184625 - OTT_1718 - transposase 1719 29.98 0 1739740..1740246 + 168 189184626 - OTT_1719 - transposase 1720 35.21 +1 1740356..1740568 + 70 189184627 - OTT_1720 - putative conjugative transfer protein TraH 1721 37.20 +1 1740568..1740903 + 111 189184628 - OTT_1721 - putative conjugative transfer protein TraG 1722 32.29 0 1741080..1742042 + 320 189184629 - OTT_1722 - transposase 1723 31.80 0 1742657..1745908 + 1083 189184630 - OTT_1723 - sensor histidine kinase/response regulator/transporter hybrid protein 1724 30.63 0 1746029..1746991 - 320 189184631 - OTT_1724 - hypothetical protein 1725 30.03 0 1747113..1747688 - 191 189184632 - OTT_1725 - RelA/SpoT-related protein 1726 30.30 0 1747789..1748646 - 285 189184633 - OTT_1726 - hypothetical protein 1727 28.94 0 1748668..1749396 - 242 189184634 - OTT_1727 - hypothetical protein 1728 29.63 0 1749772..1750581 + 269 189184635 - OTT_1728 - N6 adenine-specific DNA-methyltransferase 1729 31.88 0 1750585..1751133 - 182 189184636 - OTT_1729 - hypothetical protein 1730 30.77 0 1751181..1751648 - 155 189184637 - OTT_1730 - ankyrin repeat-containing protein 03_14 1731 31.94 0 1752043..1753479 - 478 189184638 - OTT_1731 - replicative DNA helicase 1732 29.15 0 1753488..1754681 - 397 189184639 - OTT_1732 - hypothetical protein 1733 36.64 +1 1754757..1755452 - 231 189184640 - OTT_1733 - putative conjugative transfer protein TraH 1734 34.21 0 1755442..1755555 - 37 189184641 - OTT_1734 - putative conjugative transfer protein TraH 1735 27.99 -1 1755631..1756023 - 130 189184642 - OTT_1735 - putative integrase 1736 34.68 +1 1756606..1756902 - 98 189184643 - OTT_1736 - reverse transcriptase 1737 28.90 0 1757661..1758449 - 262 189184644 znuB OTT_1737 - zinc/manganese ABC transporter permease protein 1738 30.39 0 1758430..1759143 - 237 189184645 znuC OTT_1738 - zinc/manganese ABC transporter ATP-binding protein 1739 31.55 0 1759413..1759973 - 186 189184646 - OTT_1739 - hypothetical protein 1740 31.01 0 1759985..1761664 - 559 189184647 dnaX OTT_1740 - DNA polymerase III gamma and tau chains 1741 31.36 0 1762740..1765223 + 827 189184648 sca2 OTT_1741 - putative cell surface antigen 1742 28.32 -1 1765315..1766790 - 491 189184649 - OTT_1742 - hypothetical protein 1743 32.53 0 1766849..1768219 - 456 189184650 xseA OTT_1743 - exodeoxyribonuclease large subunit 1744 29.73 0 1768415..1769164 - 249 189184651 phnP OTT_1744 - PhnP protein 1745 27.35 -1 1769269..1769937 + 222 189184652 - OTT_1745 - putative membrane-associated phospholipid phosphatase 1746 30.89 0 1770075..1770401 + 108 189184653 rplU OTT_1746 - 50S ribosomal protein L21 1747 32.59 0 1770442..1770711 + 89 189184654 rpmA OTT_1747 - 50S ribosomal protein L27 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0