version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1596 27.68 -1 1629617..1630111 + 164 189184503 secB OTT_1596 - protein-export protein SecB 1597 30.75 0 1631109..1632308 + 399 189184504 - OTT_1597 - putative integrase 1598 36.01 +1 1632429..1632764 + 111 189184505 - OTT_1598 - hypothetical protein 1599 31.52 0 1632764..1633315 + 183 189184506 - OTT_1599 - putative conjugative transfer protein TraE 1600 29.04 0 1633312..1633614 + 100 189184507 - OTT_1600 - hypothetical protein 1601 28.57 0 1633614..1633718 + 34 189184508 - OTT_1601 - hypothetical protein 1602 35.50 +1 1633818..1634924 + 368 189184509 - OTT_1602 - putative conjugative transfer protein TraB 1603 36.03 +1 1635195..1636010 + 271 189184510 - OTT_1603 - hypothetical protein 1604 31.71 0 1636061..1636306 - 81 189184511 - OTT_1604 - transposase 1605 38.89 +2 1636695..1637378 + 227 189184512 - OTT_1605 - putative conjugative transfer protein TraU 1606 31.15 0 1637463..1637783 + 106 189184513 - OTT_1606 - putative conjugative transfer protein TrbC 1607 33.81 0 1637780..1639471 + 563 189184514 - OTT_1607 - putative conjugative transfer protein TraN 1608 35.41 +1 1639468..1640094 + 208 189184515 - OTT_1608 - putative conjugative transfer protein TraF 1609 37.25 +1 1640170..1641063 + 297 189184516 - OTT_1609 - putative conjugative transfer protein TraH 1610 25.15 -2 1641077..1641247 + 56 189184517 - OTT_1610 - putative conjugative transfer protein TraH 1611 29.57 0 1641228..1641572 + 114 189184518 - OTT_1611 - putative conjugative transfer protein TraD 1612 36.21 +1 1641574..1641747 + 57 189184519 - OTT_1612 - putative conjugative transfer protein TraD 1613 33.83 0 1641810..1642820 + 336 189184520 - OTT_1613 - putative conjugative transfer protein TraD 1614 35.37 +1 1642838..1643377 - 179 189184521 - OTT_1614 - putative transposase 1615 34.12 0 1643433..1644320 - 295 189184522 dapD OTT_1615 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1616 27.29 -1 1644385..1645029 + 214 189184523 - OTT_1616 - hypothetical protein 1617 30.71 0 1646106..1646525 + 139 189184524 - OTT_1617 - hypothetical protein 1618 29.88 0 1646548..1646952 + 134 189184525 - OTT_1618 - hypothetical protein 1619 29.70 0 1646968..1647711 + 247 189184526 - OTT_1619 - RelA/SpoT-related protein 1620 27.50 -1 1648164..1648523 - 119 189184527 - OTT_1620 - TPR repeat-containing protein 06_02 1621 38.64 +2 1648894..1649025 - 43 189184528 - OTT_1621 - hypothetical protein 1622 31.12 0 1649268..1649810 - 180 189184529 - OTT_1622 - putative integrase 1623 28.05 -1 1650552..1650797 - 81 189184530 - OTT_1623 - hypothetical protein 1624 33.17 0 1651363..1651980 - 205 189184531 rnhB OTT_1624 - ribonuclease HII 1625 28.90 0 1652050..1653087 + 345 189184532 miaA OTT_1625 - tRNA delta(2)-isopentenylpyrophosphate transferase 1626 28.51 0 1653071..1653817 + 248 189184533 - OTT_1626 - hypothetical protein 1627 29.80 0 1653947..1654597 + 216 189184534 hda OTT_1627 - DnaA homologue Had protein 1628 31.65 0 1654661..1657033 - 790 189184535 lon OTT_1628 - ATP-dependent protease La 1629 31.76 0 1657150..1658163 + 337 189184536 tdcB OTT_1629 - threonine dehydratase 1630 29.00 0 1658728..1660596 - 622 189184537 - OTT_1630 - hypothetical protein 1631 32.15 0 1661149..1662918 - 589 189184538 - OTT_1631 - repeat-containing protein A_05 1632 35.01 +1 1663297..1663653 + 118 189184539 - OTT_1632 - transposase 1633 27.20 -1 1663875..1664249 + 124 189184540 - OTT_1633 - transposase 1634 31.11 0 1664236..1664370 + 44 189184541 - OTT_1634 - transposase 1635 28.80 0 1664427..1664801 + 124 189184542 - OTT_1635 - transposase 1636 29.98 0 1664788..1665294 + 168 189184543 - OTT_1636 - transposase 1637 28.99 0 1666218..1667438 - 406 189184544 proP3 OTT_1637 - proline/betaine transporter 1638 32.66 0 1667750..1668646 - 298 189184545 hemC OTT_1638 - porphobilinogen deaminase 1639 30.90 0 1668819..1670378 + 519 189184546 icd OTT_1639 - isocitrate dehydrogenase 1640 31.99 0 1671520..1674954 + 1144 189184547 - OTT_1640 - sensor histidine kinase/response regulator/transporter hybrid protein 1641 30.39 0 1675145..1675348 - 67 189184548 - OTT_1641 - putative transposase 1642 31.28 0 1675400..1676518 - 372 189184549 - OTT_1642 - putative conjugative transfer protein TraI 1643 33.58 0 1676802..1677626 - 274 189184550 - OTT_1643 - putative conjugative transfer protein TraA 1644 34.09 0 1677641..1678564 - 307 189184551 - OTT_1644 - putative conjugative transfer protein TraA 1645 33.63 0 1678606..1679622 - 338 189184552 - OTT_1645 - putative conjugative transfer protein TraA 1646 35.31 +1 1679900..1680355 + 151 189184553 - OTT_1646 - putative conjugative transfer protein TraD 1647 34.00 0 1680414..1680713 - 99 189184554 - OTT_1647 - hypothetical protein 1648 36.64 +1 1680944..1681336 - 130 189184555 - OTT_1648 - hypothetical protein 1649 29.59 0 1681748..1682362 - 204 189184556 - OTT_1649 - RelA/SpoT-related protein 1650 29.29 0 1682646..1683041 - 131 189184557 - OTT_1650 - transposase 1651 29.84 0 1683136..1683507 - 123 189184558 - OTT_1651 - transposase 1652 36.61 +1 1683949..1684284 + 111 189184559 - OTT_1652 - hypothetical protein 1653 30.70 0 1684284..1684700 + 138 189184560 - OTT_1653 - putative conjugative transfer protein TraE 1654 31.07 0 1684642..1684818 + 58 189184561 - OTT_1654 - RelA/SpoT-related protein 1655 30.10 0 1684940..1685866 + 308 189184562 - OTT_1655 - hypothetical protein 1656 29.18 0 1686162..1687052 - 296 189184563 - OTT_1656 - hypothetical protein 1657 33.86 0 1687328..1688467 - 379 189184564 - OTT_1657 - reverse transcriptase 1658 39.45 +2 1688451..1688777 + 108 189184565 - OTT_1658 - hypothetical protein 1659 28.87 0 1688977..1689267 + 96 189184566 - OTT_1659 - hypothetical protein 1660 31.43 0 1689495..1689968 + 157 189184567 - OTT_1660 - hypothetical protein 1661 30.14 0 1689991..1690929 + 312 189184568 - OTT_1661 - hypothetical protein 1662 28.89 0 1690948..1691442 + 164 189184569 - OTT_1662 - hypothetical protein 1663 31.55 0 1691484..1691876 + 130 189184570 - OTT_1663 - RelA/SpoT-related protein 1664 30.77 0 1691916..1692071 + 51 189184571 - OTT_1664 - RelA/SpoT-related protein 1665 31.53 0 1692193..1693191 + 332 189184572 - OTT_1665 - hypothetical protein 1666 37.50 +1 1693259..1693522 - 87 189184573 - OTT_1666 - putative conjugative transfer protein TraD 1667 29.05 0 1693887..1694960 - 357 189184574 - OTT_1667 - TPR repeat-containing protein 08 1668 37.50 +1 1695308..1695547 - 79 189184575 - OTT_1668 - putative conjugative transfer protein TraD 1669 30.00 0 1695716..1696135 + 139 189184576 - OTT_1669 - hypothetical protein 1670 30.50 0 1696158..1697111 + 317 189184577 - OTT_1670 - hypothetical protein 1671 28.57 0 1697158..1697409 + 83 189184578 - OTT_1671 - hypothetical protein 1672 34.86 +1 1697482..1697940 - 152 189184579 - OTT_1672 - putative conjugative transfer protein TraD 1673 33.38 0 1698219..1700231 + 670 189184580 - OTT_1673 - putative conjugative transfer protein TraA 1674 34.90 +1 1700246..1700437 + 63 189184581 - OTT_1674 - putative conjugative transfer protein TraA 1675 35.88 +1 1700473..1700865 + 130 189184582 - OTT_1675 - putative conjugative transfer protein TraI 1676 31.17 0 1700851..1701498 - 215 189184583 - OTT_1676 - putative transposase 1677 31.47 0 1701550..1702620 - 356 189184584 - OTT_1677 - putative conjugative transfer protein TraI 1678 33.45 0 1702951..1704699 - 582 189184585 - OTT_1678 - putative conjugative transfer protein TraA 1679 33.63 0 1704741..1705757 - 338 189184586 - OTT_1679 - putative conjugative transfer protein TraA 1680 36.18 +1 1706035..1706490 + 151 189184587 - OTT_1680 - putative conjugative transfer protein TraD 1681 29.10 0 1706582..1707124 + 180 189184588 - OTT_1681 - hypothetical protein 1682 28.43 0 1707210..1707515 - 101 189184589 - OTT_1682 - RelA/SpoT-related protein 1683 33.68 0 1707902..1709041 - 379 189184590 - OTT_1683 - reverse transcriptase 1684 30.75 0 1709642..1710841 - 399 189184591 - OTT_1684 - putative integrase 1685 32.58 0 1711409..1711675 + 88 189184592 - OTT_1685 - hypothetical protein 1686 30.95 0 1711741..1711992 + 83 189184593 - OTT_1686 - hypothetical protein 1687 37.80 +2 1712235..1712726 + 163 189184594 - OTT_1687 - hypothetical protein 1688 29.87 0 1712765..1713514 - 249 189184595 - OTT_1688 - Predicted sulfurtransferase 1689 26.57 -1 1713625..1714260 - 211 189184596 - OTT_1689 - hypothetical protein 1690 28.99 0 1714716..1714853 - 45 189184597 - OTT_1690 - transposase 1691 31.26 0 1715274..1716428 - 384 189184598 - OTT_1691 - hypothetical protein 1692 33.33 0 1717016..1717138 + 40 189184599 - OTT_1692 - hypothetical protein 1693 32.58 0 1719514..1719780 + 88 189184600 - OTT_1693 - reverse transcriptase 1694 41.50 +2 1719880..1720320 - 146 189184601 - OTT_1694 - hypothetical protein 1695 33.86 0 1720304..1721443 + 379 189184602 - OTT_1695 - reverse transcriptase 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0