version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1550 33.55 0 1580343..1580795 - 150 189184457 - OTT_1550 - putative conjugative transfer protein TraA 1551 33.33 0 1580905..1581144 + 79 189184458 - OTT_1551 - transposase 1552 39.18 +2 1581364..1581534 + 56 189184459 - OTT_1552 - putative conjugative transfer protein TraD 1553 28.67 0 1581602..1582480 - 292 189184460 - OTT_1553 - hypothetical protein 1554 30.86 0 1582650..1582811 - 53 189184461 - OTT_1554 - RelA/SpoT-related protein 1555 29.85 0 1583064..1584155 + 363 189184462 - OTT_1555 - hypothetical protein 1556 31.23 0 1584274..1585272 + 332 189184463 - OTT_1556 - hypothetical protein 1557 36.84 +1 1585345..1585743 - 132 189184464 - OTT_1557 - putative conjugative transfer protein TraD 1558 32.30 0 1586044..1587012 - 322 189184465 - OTT_1558 - transposase 1559 37.20 +1 1587183..1587518 - 111 189184466 - OTT_1559 - putative conjugative transfer protein TraG 1560 32.50 0 1587518..1587997 - 159 189184467 - OTT_1560 - putative conjugative transfer protein TraH 1561 36.98 +1 1588192..1588821 - 209 189184468 - OTT_1561 - putative conjugative transfer protein TraH 1562 32.58 0 1588818..1588949 - 43 189184469 - OTT_1562 - putative conjugative transfer protein TraF 1563 33.60 0 1589234..1590373 - 379 189184470 - OTT_1563 - reverse transcriptase 1564 39.33 +2 1590357..1590656 + 99 189184471 - OTT_1564 - hypothetical protein 1565 29.56 0 1591183..1592982 - 599 189184472 - OTT_1565 - hypothetical protein 1566 28.65 0 1593495..1593878 - 127 189184473 - OTT_1566 - transposase 1567 30.80 0 1594095..1595867 - 590 189184474 virD4 OTT_1567 - type IV secretion system protein VirD4 1568 32.53 0 1595867..1596856 - 329 189184475 virB11 OTT_1568 - type IV secretion system protein VirB11 1569 32.03 0 1596856..1598385 - 509 189184476 virB10 OTT_1569 - type IV secretion system protein VirB10 1570 28.54 0 1598385..1598822 - 145 189184477 virB9 OTT_1570 - type IV secretion system protein VirB9 1571 28.49 0 1598806..1599486 - 226 189184478 virB8 OTT_1571 - type IV secretion system protein VirB8 1572 28.48 0 1599725..1601023 - 432 189184479 dnaN OTT_1572 - DNA polymerase III beta chain 1573 33.47 0 1601042..1602454 - 470 189184480 dnaA OTT_1573 - chromosomal replication initiator protein DnaA 1574 28.80 0 1602755..1603063 + 102 189184481 - OTT_1574 - hypothetical protein 1575 31.24 0 1603487..1605013 + 508 189184482 - OTT_1575 - ankyrin repeat-containing protein 20 1576 24.35 -2 1606140..1606562 - 140 189184483 - OTT_1576 - hypothetical protein 1577 34.14 0 1606893..1608386 + 497 189184484 ubiD OTT_1577 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1578 31.62 0 1608509..1610260 - 583 189184485 pbpA1 OTT_1578 - penicillin-binding protein PbpA1 1579 23.66 -2 1610250..1610735 - 161 189184486 - OTT_1579 - hypothetical protein 1580 30.78 0 1610741..1611874 - 377 189184487 rodA OTT_1580 - rod shape-determining protein RodA 1581 32.39 0 1612045..1612467 - 140 189184488 - OTT_1581 - hypothetical protein 1582 29.61 0 1612483..1613019 - 178 189184489 mpg OTT_1582 - DNA-3-methyladenine glycosidase 1583 33.97 0 1613054..1614937 - 627 189184490 ftsH OTT_1583 - FtsH protein 1584 29.49 0 1614954..1616279 - 441 189184491 mesJ OTT_1584 - MesJ protein 1585 28.33 0 1616605..1618044 - 479 189184492 nuoN1 OTT_1585 - NADH dehydrogenase I chain N 1586 29.13 0 1618089..1619588 - 499 189184493 nuoM OTT_1586 - NADH dehydrogenase I chain M 1587 27.62 -1 1619589..1621496 - 635 189184494 nuoL1 OTT_1587 - NADH dehydrogenase I chain L 1588 28.40 0 1621500..1621823 - 107 189184495 nuoK OTT_1588 - NADH dehydrogenase I chain K 1589 29.23 0 1621807..1622415 - 202 189184496 nuoJ OTT_1589 - NADH dehydrogenase I chain J 1590 32.72 0 1622419..1622904 - 161 189184497 nuoI OTT_1590 - NADH dehydrogenase I chain I 1591 31.70 0 1622958..1624001 - 347 189184498 nuoH OTT_1591 - NADH dehydrogenase I chain H 1592 32.21 0 1624058..1626097 - 679 189184499 nuoG OTT_1592 - NADH dehydrogenase I chain G 1593 29.26 0 1626377..1626940 + 187 189184500 rrf OTT_1593 - ribosome recycling factor 1594 33.80 0 1627134..1628414 - 426 189184501 - OTT_1594 - hypothetical protein 1595 33.86 0 1629009..1629575 + 188 189184502 dcd OTT_1595 - deoxycytidine triphosphate deaminase 1596 27.68 -1 1629617..1630111 + 164 189184503 secB OTT_1596 - protein-export protein SecB 1597 30.75 0 1631109..1632308 + 399 189184504 - OTT_1597 - putative integrase 1598 36.01 +1 1632429..1632764 + 111 189184505 - OTT_1598 - hypothetical protein 1599 31.52 0 1632764..1633315 + 183 189184506 - OTT_1599 - putative conjugative transfer protein TraE 1600 29.04 0 1633312..1633614 + 100 189184507 - OTT_1600 - hypothetical protein 1601 28.57 0 1633614..1633718 + 34 189184508 - OTT_1601 - hypothetical protein 1602 35.50 +1 1633818..1634924 + 368 189184509 - OTT_1602 - putative conjugative transfer protein TraB 1603 36.03 +1 1635195..1636010 + 271 189184510 - OTT_1603 - hypothetical protein 1604 31.71 0 1636061..1636306 - 81 189184511 - OTT_1604 - transposase 1605 38.89 +2 1636695..1637378 + 227 189184512 - OTT_1605 - putative conjugative transfer protein TraU 1606 31.15 0 1637463..1637783 + 106 189184513 - OTT_1606 - putative conjugative transfer protein TrbC 1607 33.81 0 1637780..1639471 + 563 189184514 - OTT_1607 - putative conjugative transfer protein TraN 1608 35.41 +1 1639468..1640094 + 208 189184515 - OTT_1608 - putative conjugative transfer protein TraF 1609 37.25 +1 1640170..1641063 + 297 189184516 - OTT_1609 - putative conjugative transfer protein TraH 1610 25.15 -2 1641077..1641247 + 56 189184517 - OTT_1610 - putative conjugative transfer protein TraH 1611 29.57 0 1641228..1641572 + 114 189184518 - OTT_1611 - putative conjugative transfer protein TraD 1612 36.21 +1 1641574..1641747 + 57 189184519 - OTT_1612 - putative conjugative transfer protein TraD 1613 33.83 0 1641810..1642820 + 336 189184520 - OTT_1613 - putative conjugative transfer protein TraD 1614 35.37 +1 1642838..1643377 - 179 189184521 - OTT_1614 - putative transposase 1615 34.12 0 1643433..1644320 - 295 189184522 dapD OTT_1615 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1616 27.29 -1 1644385..1645029 + 214 189184523 - OTT_1616 - hypothetical protein 1617 30.71 0 1646106..1646525 + 139 189184524 - OTT_1617 - hypothetical protein 1618 29.88 0 1646548..1646952 + 134 189184525 - OTT_1618 - hypothetical protein 1619 29.70 0 1646968..1647711 + 247 189184526 - OTT_1619 - RelA/SpoT-related protein 1620 27.50 -1 1648164..1648523 - 119 189184527 - OTT_1620 - TPR repeat-containing protein 06_02 1621 38.64 +2 1648894..1649025 - 43 189184528 - OTT_1621 - hypothetical protein 1622 31.12 0 1649268..1649810 - 180 189184529 - OTT_1622 - putative integrase 1623 28.05 -1 1650552..1650797 - 81 189184530 - OTT_1623 - hypothetical protein 1624 33.17 0 1651363..1651980 - 205 189184531 rnhB OTT_1624 - ribonuclease HII 1625 28.90 0 1652050..1653087 + 345 189184532 miaA OTT_1625 - tRNA delta(2)-isopentenylpyrophosphate transferase 1626 28.51 0 1653071..1653817 + 248 189184533 - OTT_1626 - hypothetical protein 1627 29.80 0 1653947..1654597 + 216 189184534 hda OTT_1627 - DnaA homologue Had protein 1628 31.65 0 1654661..1657033 - 790 189184535 lon OTT_1628 - ATP-dependent protease La 1629 31.76 0 1657150..1658163 + 337 189184536 tdcB OTT_1629 - threonine dehydratase 1630 29.00 0 1658728..1660596 - 622 189184537 - OTT_1630 - hypothetical protein 1631 32.15 0 1661149..1662918 - 589 189184538 - OTT_1631 - repeat-containing protein A_05 1632 35.01 +1 1663297..1663653 + 118 189184539 - OTT_1632 - transposase 1633 27.20 -1 1663875..1664249 + 124 189184540 - OTT_1633 - transposase 1634 31.11 0 1664236..1664370 + 44 189184541 - OTT_1634 - transposase 1635 28.80 0 1664427..1664801 + 124 189184542 - OTT_1635 - transposase 1636 29.98 0 1664788..1665294 + 168 189184543 - OTT_1636 - transposase 1637 28.99 0 1666218..1667438 - 406 189184544 proP3 OTT_1637 - proline/betaine transporter 1638 32.66 0 1667750..1668646 - 298 189184545 hemC OTT_1638 - porphobilinogen deaminase 1639 30.90 0 1668819..1670378 + 519 189184546 icd OTT_1639 - isocitrate dehydrogenase 1640 31.99 0 1671520..1674954 + 1144 189184547 - OTT_1640 - sensor histidine kinase/response regulator/transporter hybrid protein 1641 30.39 0 1675145..1675348 - 67 189184548 - OTT_1641 - putative transposase 1642 31.28 0 1675400..1676518 - 372 189184549 - OTT_1642 - putative conjugative transfer protein TraI 1643 33.58 0 1676802..1677626 - 274 189184550 - OTT_1643 - putative conjugative transfer protein TraA 1644 34.09 0 1677641..1678564 - 307 189184551 - OTT_1644 - putative conjugative transfer protein TraA 1645 33.63 0 1678606..1679622 - 338 189184552 - OTT_1645 - putative conjugative transfer protein TraA 1646 35.31 +1 1679900..1680355 + 151 189184553 - OTT_1646 - putative conjugative transfer protein TraD 1647 34.00 0 1680414..1680713 - 99 189184554 - OTT_1647 - hypothetical protein 1648 36.64 +1 1680944..1681336 - 130 189184555 - OTT_1648 - hypothetical protein 1649 29.59 0 1681748..1682362 - 204 189184556 - OTT_1649 - RelA/SpoT-related protein 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0