version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1513 27.98 -1 1543255..1543497 + 80 189184420 - OTT_1513 - transposase 1514 27.19 -1 1544527..1544640 + 37 189184421 - OTT_1514 - putative integrase 1515 28.19 -1 1545218..1546111 + 297 189184422 - OTT_1515 - putative lipase LipB 1516 27.97 -1 1546680..1546940 - 86 189184423 - OTT_1516 - putative integrase 1517 31.51 0 1548337..1548555 - 72 189184424 - OTT_1517 - reverse transcriptase 1518 35.16 +1 1548914..1549132 - 72 189184425 - OTT_1518 - ankyrin repeat-containing protein 18 1519 32.11 0 1549361..1549852 - 163 189184426 - OTT_1519 - ankyrin repeat-containing protein 19 1520 33.33 0 1550311..1550709 - 132 189184427 - OTT_1520 - putative conjugative transfer protein TraI 1521 27.80 -1 1550821..1551489 + 222 189184428 - OTT_1521 - hypothetical protein 1522 33.71 0 1551687..1552484 - 265 189184429 - OTT_1522 - putative conjugative transfer protein TraA 1523 33.60 0 1552499..1553641 - 380 189184430 - OTT_1523 - putative conjugative transfer protein TraA 1524 31.11 0 1553709..1553843 - 44 189184431 - OTT_1524 - putative conjugative transfer protein TraA 1525 34.84 +1 1554140..1554604 + 154 189184432 - OTT_1525 - putative conjugative transfer protein TraD 1526 29.50 0 1554608..1556173 - 521 189184433 - OTT_1526 - hypothetical protein 1527 35.44 +1 1556883..1557215 - 110 189184434 - OTT_1527 - replicative DNA helicase 1528 31.55 0 1557279..1558121 - 280 189184435 - OTT_1528 - hypothetical protein 1529 27.60 -1 1558097..1558480 - 127 189184436 - OTT_1529 - hypothetical protein 1530 35.80 +1 1558960..1559202 + 80 189184437 - OTT_1530 - transposase 1531 28.81 0 1559281..1559457 + 58 189184438 - OTT_1531 - transposase 1532 26.88 -1 1559621..1559806 + 61 189184439 - OTT_1532 - transposase 1533 33.97 0 1560448..1561383 - 311 189184440 - OTT_1533 - reverse transcriptase 1534 32.30 0 1561630..1562598 + 322 189184441 - OTT_1534 - transposase 1535 28.77 0 1562614..1562832 - 72 189184442 - OTT_1535 - reverse transcriptase 1536 41.95 +2 1562816..1563256 + 146 189184443 - OTT_1536 - hypothetical protein 1537 31.87 0 1563657..1564679 - 340 189184444 - OTT_1537 - putative integrase 1538 30.30 0 1565138..1565368 - 76 189184445 - OTT_1538 - transposase 1539 34.47 0 1566412..1567200 - 262 189184446 - OTT_1539 - hypothetical protein 1540 26.00 -1 1568227..1568376 + 49 189184447 - OTT_1540 - hypothetical protein 1541 34.21 0 1568941..1570080 + 379 189184448 - OTT_1541 - reverse transcriptase 1542 29.25 0 1570996..1572513 + 505 189184449 phrB OTT_1542 - deoxyribodipyrimidine photolyase, DNA photolyase 1543 33.44 0 1572534..1573496 - 320 189184450 trxB1 OTT_1543 - thioredoxin reductase 1544 30.30 0 1573626..1574549 - 307 189184451 - OTT_1544 - hypothetical protein 1545 29.74 0 1574725..1576086 - 453 189184452 tolB OTT_1545 - TolB protein precursor 1546 33.75 0 1576420..1577847 - 475 189184453 pdhD OTT_1546 - dihydrolipoamide dehydrogenase precursor 1547 29.73 0 1577939..1578742 - 267 189184454 bioC OTT_1547 - hypothetical protein 1548 36.12 +1 1578918..1579526 + 202 189184455 - OTT_1548 - 22kDa antigen 1549 30.49 0 1579697..1580365 - 222 189184456 - OTT_1549 - putative conjugative transfer protein TraA 1550 33.55 0 1580343..1580795 - 150 189184457 - OTT_1550 - putative conjugative transfer protein TraA 1551 33.33 0 1580905..1581144 + 79 189184458 - OTT_1551 - transposase 1552 39.18 +2 1581364..1581534 + 56 189184459 - OTT_1552 - putative conjugative transfer protein TraD 1553 28.67 0 1581602..1582480 - 292 189184460 - OTT_1553 - hypothetical protein 1554 30.86 0 1582650..1582811 - 53 189184461 - OTT_1554 - RelA/SpoT-related protein 1555 29.85 0 1583064..1584155 + 363 189184462 - OTT_1555 - hypothetical protein 1556 31.23 0 1584274..1585272 + 332 189184463 - OTT_1556 - hypothetical protein 1557 36.84 +1 1585345..1585743 - 132 189184464 - OTT_1557 - putative conjugative transfer protein TraD 1558 32.30 0 1586044..1587012 - 322 189184465 - OTT_1558 - transposase 1559 37.20 +1 1587183..1587518 - 111 189184466 - OTT_1559 - putative conjugative transfer protein TraG 1560 32.50 0 1587518..1587997 - 159 189184467 - OTT_1560 - putative conjugative transfer protein TraH 1561 36.98 +1 1588192..1588821 - 209 189184468 - OTT_1561 - putative conjugative transfer protein TraH 1562 32.58 0 1588818..1588949 - 43 189184469 - OTT_1562 - putative conjugative transfer protein TraF 1563 33.60 0 1589234..1590373 - 379 189184470 - OTT_1563 - reverse transcriptase 1564 39.33 +2 1590357..1590656 + 99 189184471 - OTT_1564 - hypothetical protein 1565 29.56 0 1591183..1592982 - 599 189184472 - OTT_1565 - hypothetical protein 1566 28.65 0 1593495..1593878 - 127 189184473 - OTT_1566 - transposase 1567 30.80 0 1594095..1595867 - 590 189184474 virD4 OTT_1567 - type IV secretion system protein VirD4 1568 32.53 0 1595867..1596856 - 329 189184475 virB11 OTT_1568 - type IV secretion system protein VirB11 1569 32.03 0 1596856..1598385 - 509 189184476 virB10 OTT_1569 - type IV secretion system protein VirB10 1570 28.54 0 1598385..1598822 - 145 189184477 virB9 OTT_1570 - type IV secretion system protein VirB9 1571 28.49 0 1598806..1599486 - 226 189184478 virB8 OTT_1571 - type IV secretion system protein VirB8 1572 28.48 0 1599725..1601023 - 432 189184479 dnaN OTT_1572 - DNA polymerase III beta chain 1573 33.47 0 1601042..1602454 - 470 189184480 dnaA OTT_1573 - chromosomal replication initiator protein DnaA 1574 28.80 0 1602755..1603063 + 102 189184481 - OTT_1574 - hypothetical protein 1575 31.24 0 1603487..1605013 + 508 189184482 - OTT_1575 - ankyrin repeat-containing protein 20 1576 24.35 -2 1606140..1606562 - 140 189184483 - OTT_1576 - hypothetical protein 1577 34.14 0 1606893..1608386 + 497 189184484 ubiD OTT_1577 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1578 31.62 0 1608509..1610260 - 583 189184485 pbpA1 OTT_1578 - penicillin-binding protein PbpA1 1579 23.66 -2 1610250..1610735 - 161 189184486 - OTT_1579 - hypothetical protein 1580 30.78 0 1610741..1611874 - 377 189184487 rodA OTT_1580 - rod shape-determining protein RodA 1581 32.39 0 1612045..1612467 - 140 189184488 - OTT_1581 - hypothetical protein 1582 29.61 0 1612483..1613019 - 178 189184489 mpg OTT_1582 - DNA-3-methyladenine glycosidase 1583 33.97 0 1613054..1614937 - 627 189184490 ftsH OTT_1583 - FtsH protein 1584 29.49 0 1614954..1616279 - 441 189184491 mesJ OTT_1584 - MesJ protein 1585 28.33 0 1616605..1618044 - 479 189184492 nuoN1 OTT_1585 - NADH dehydrogenase I chain N 1586 29.13 0 1618089..1619588 - 499 189184493 nuoM OTT_1586 - NADH dehydrogenase I chain M 1587 27.62 -1 1619589..1621496 - 635 189184494 nuoL1 OTT_1587 - NADH dehydrogenase I chain L 1588 28.40 0 1621500..1621823 - 107 189184495 nuoK OTT_1588 - NADH dehydrogenase I chain K 1589 29.23 0 1621807..1622415 - 202 189184496 nuoJ OTT_1589 - NADH dehydrogenase I chain J 1590 32.72 0 1622419..1622904 - 161 189184497 nuoI OTT_1590 - NADH dehydrogenase I chain I 1591 31.70 0 1622958..1624001 - 347 189184498 nuoH OTT_1591 - NADH dehydrogenase I chain H 1592 32.21 0 1624058..1626097 - 679 189184499 nuoG OTT_1592 - NADH dehydrogenase I chain G 1593 29.26 0 1626377..1626940 + 187 189184500 rrf OTT_1593 - ribosome recycling factor 1594 33.80 0 1627134..1628414 - 426 189184501 - OTT_1594 - hypothetical protein 1595 33.86 0 1629009..1629575 + 188 189184502 dcd OTT_1595 - deoxycytidine triphosphate deaminase 1596 27.68 -1 1629617..1630111 + 164 189184503 secB OTT_1596 - protein-export protein SecB 1597 30.75 0 1631109..1632308 + 399 189184504 - OTT_1597 - putative integrase 1598 36.01 +1 1632429..1632764 + 111 189184505 - OTT_1598 - hypothetical protein 1599 31.52 0 1632764..1633315 + 183 189184506 - OTT_1599 - putative conjugative transfer protein TraE 1600 29.04 0 1633312..1633614 + 100 189184507 - OTT_1600 - hypothetical protein 1601 28.57 0 1633614..1633718 + 34 189184508 - OTT_1601 - hypothetical protein 1602 35.50 +1 1633818..1634924 + 368 189184509 - OTT_1602 - putative conjugative transfer protein TraB 1603 36.03 +1 1635195..1636010 + 271 189184510 - OTT_1603 - hypothetical protein 1604 31.71 0 1636061..1636306 - 81 189184511 - OTT_1604 - transposase 1605 38.89 +2 1636695..1637378 + 227 189184512 - OTT_1605 - putative conjugative transfer protein TraU 1606 31.15 0 1637463..1637783 + 106 189184513 - OTT_1606 - putative conjugative transfer protein TrbC 1607 33.81 0 1637780..1639471 + 563 189184514 - OTT_1607 - putative conjugative transfer protein TraN 1608 35.41 +1 1639468..1640094 + 208 189184515 - OTT_1608 - putative conjugative transfer protein TraF 1609 37.25 +1 1640170..1641063 + 297 189184516 - OTT_1609 - putative conjugative transfer protein TraH 1610 25.15 -2 1641077..1641247 + 56 189184517 - OTT_1610 - putative conjugative transfer protein TraH 1611 29.57 0 1641228..1641572 + 114 189184518 - OTT_1611 - putative conjugative transfer protein TraD 1612 36.21 +1 1641574..1641747 + 57 189184519 - OTT_1612 - putative conjugative transfer protein TraD 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0