version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1372 32.30 0 1398344..1399312 - 322 189184279 - OTT_1372 - transposase 1373 37.50 +1 1399483..1399818 - 111 189184280 - OTT_1373 - putative conjugative transfer protein TraG 1374 32.72 0 1399818..1400303 - 161 189184281 - OTT_1374 - putative conjugative transfer protein TraH 1375 36.83 +1 1400492..1401121 - 209 189184282 - OTT_1375 - putative conjugative transfer protein TraH 1376 33.33 0 1401887..1402111 + 74 189184283 infA OTT_1376 - translation initiation factor IF-1 1377 31.66 0 1402154..1402750 + 198 189184284 maf OTT_1377 - septum formation associated protein Maf 1378 32.13 0 1402877..1403626 + 249 189184285 - OTT_1378 - hypothetical protein 1379 32.23 0 1403728..1406445 + 905 189184286 gyrA OTT_1379 - DNA gyrase subunit A 1380 31.62 0 1406479..1407759 + 426 189184287 glyA OTT_1380 - serine hydroxymethyltransferase 1381 27.04 -1 1408449..1410941 - 830 189184288 - OTT_1381 - hypothetical protein 1382 26.67 -1 1411177..1411716 - 179 189184289 rnpA OTT_1382 - ribonuclease P 1383 41.48 +2 1411717..1411851 - 44 189184290 rpmH OTT_1383 - 50S ribosomal protein L34 1384 33.21 0 1412734..1413528 + 264 189184291 fbcH OTT_1384 - cytochrome c1, heme protein precursor 1385 35.05 +1 1414017..1414772 - 251 189184292 rph OTT_1385 - ribonuclease PH 1386 29.65 0 1414902..1415498 + 198 189184293 grpE OTT_1386 - heat shock protein GrpE 1387 28.79 0 1415868..1415999 - 43 189184294 - OTT_1387 - transposase 1388 30.65 0 1416850..1417482 - 210 189184295 rnd OTT_1388 - ribonuclease D 1389 26.67 -1 1417489..1417788 - 99 189184296 - OTT_1389 - hypothetical protein 1390 30.41 0 1417796..1418446 - 216 189184297 cdsA OTT_1390 - phosphatidate cytidylyltransferase 1391 30.46 0 1418449..1419144 - 231 189184298 uppS OTT_1391 - UPP synthetase 1392 29.24 0 1419320..1421125 + 601 189184299 uup OTT_1392 - ABC transporter ATP-binding protein Uup 1393 28.99 0 1421443..1425147 - 1234 189184300 dnaE OTT_1393 - DNA polymerase III alpha chain 1394 31.97 0 1425137..1427701 - 854 189184301 valS OTT_1394 - valyl-tRNA synthetase 1395 28.88 0 1427733..1428608 + 291 189184302 ubiA OTT_1395 - 4-hydroxybenzoate octaprenyltransferase 1396 31.27 0 1428876..1429652 - 258 189184303 - OTT_1396 - hypothetical protein 1397 33.03 0 1430003..1431001 + 332 189184304 mccF OTT_1397 - microcin C7 self-immunity protein 1398 29.43 0 1432349..1432630 - 93 189184305 - OTT_1398 - putative integrase 1399 27.20 -1 1432694..1433068 - 124 189184306 - OTT_1399 - transposase 1400 31.61 0 1433022..1433195 - 57 189184307 - OTT_1400 - transposase 1401 30.65 0 1433788..1434048 - 86 189184308 - OTT_1401 - hypothetical protein 1402 33.10 0 1434580..1435440 - 286 189184309 coxB OTT_1402 - cytochrome c oxidase polypeptide II 1403 28.51 0 1435487..1435963 - 158 189184310 - OTT_1403 - hypothetical protein 1404 31.30 0 1437129..1439345 + 738 189184311 virB6 OTT_1404 - type IV secretion system protein VirB6 1405 32.44 0 1440465..1440689 - 74 189184312 - OTT_1405 - hypothetical protein 1406 28.32 -1 1440890..1441168 - 92 189184313 - OTT_1406 - TPR repeat-containing protein 07 1407 32.32 0 1441638..1444511 - 957 189184314 uvrA OTT_1407 - excinuclease ABC subunit A 1408 27.98 -1 1445029..1445271 + 80 189184315 - OTT_1408 - transposase 1409 34.03 0 1445505..1446368 - 287 189184316 - OTT_1409 - putative conjugative transfer protein TraA 1410 33.56 0 1446358..1446801 - 147 189184317 - OTT_1410 - putative conjugative transfer protein TraA 1411 31.25 0 1447204..1447491 - 95 189184318 - OTT_1411 - RelA/SpoT-related protein 1412 33.46 0 1448242..1449012 + 256 189184319 - OTT_1412 - putative conjugative transfer protein TraA 1413 31.75 0 1449091..1449279 + 62 189184320 - OTT_1413 - putative conjugative transfer protein TraA 1414 29.17 0 1449465..1449656 - 63 189184321 - OTT_1414 - putative integrase 1415 28.66 0 1450512..1451774 + 420 189184322 ampG1 OTT_1415 - AmpG protein 1416 31.13 0 1451790..1453193 + 467 189184323 panF OTT_1416 - sodium/pantothenate symporter 1417 28.02 -1 1453550..1453888 - 112 189184324 - OTT_1417 - transposase 1418 28.12 -1 1453976..1454416 - 146 189184325 - OTT_1418 - transposase 1419 28.27 -1 1454740..1454976 - 78 189184326 - OTT_1419 - hypothetical protein 1420 31.43 0 1455104..1455418 - 104 189184327 - OTT_1420 - putative conjugative transfer protein TraE 1421 29.33 0 1456748..1457047 + 99 189184328 - OTT_1421 - hypothetical protein 1422 28.82 0 1457395..1457682 - 95 189184329 - OTT_1422 - quinone oxidoreductase 1423 30.02 0 1457941..1459086 - 381 189184330 - OTT_1423 - quinone oxidoreductase 1424 29.77 0 1459397..1459789 + 130 189184331 ccmE OTT_1424 - cytochrome c-type biogenesis protein CcmE 1425 25.25 -1 1459823..1460737 + 304 189184332 - OTT_1425 - hypothetical protein 1426 30.59 0 1460734..1461207 + 157 189184333 - OTT_1426 - putative Hollyday junction resolvase 1427 32.31 0 1461221..1462984 + 587 189184334 recJ OTT_1427 - single-stranded-DNA-specific exonuclease 1428 28.70 0 1463293..1464048 - 251 189184335 mkl OTT_1428 - ribonucleotide ABC transporter ATP-binding protein 1429 30.57 0 1464077..1464943 - 288 189184336 - OTT_1429 - toluene export ABC transporter permease protein 1430 30.05 0 1464982..1465773 - 263 189184337 - OTT_1430 - hypothetical protein 1431 34.94 +1 1465900..1466523 + 207 189184338 rpsD OTT_1431 - 30S ribosomal protein S4 1432 28.25 -1 1466501..1466815 + 104 189184339 - OTT_1432 - hypothetical protein 1433 36.78 +1 1466998..1467084 + 28 189184340 - OTT_1433 - putative conjugative transfer protein TraB 1434 38.29 +2 1467309..1467752 + 147 189184341 - OTT_1434 - putative conjugative transfer protein TraU 1435 31.69 0 1467819..1468001 + 60 189184342 - OTT_1435 - putative conjugative transfer protein TraN 1436 33.90 0 1468005..1468358 + 117 189184343 - OTT_1436 - putative conjugative transfer protein TraH 1437 33.82 0 1468288..1468695 + 135 189184344 - OTT_1437 - putative conjugative transfer protein TraG 1438 33.27 0 1468849..1470384 + 511 189184345 - OTT_1438 - putative conjugative transfer protein TraD 1439 34.85 +1 1470394..1470855 - 153 189184346 - OTT_1439 - putative transposase 1440 32.29 0 1471072..1472034 + 320 189184347 - OTT_1440 - transposase 1441 30.84 0 1472050..1472610 - 186 189184348 - OTT_1441 - putative transposase 1442 32.05 0 1472662..1474224 - 520 189184349 - OTT_1442 - putative conjugative transfer protein TraI 1443 34.97 +1 1474565..1475299 - 244 189184350 - OTT_1443 - repeat-containing protein E_02 1444 33.40 0 1475436..1478240 - 934 189184351 - OTT_1444 - putative conjugative transfer protein TraA 1445 35.31 +1 1478534..1478989 + 151 189184352 - OTT_1445 - putative conjugative transfer protein TraD 1446 31.03 0 1479068..1480066 - 332 189184353 - OTT_1446 - hypothetical protein 1447 30.03 0 1480188..1480763 - 191 189184354 - OTT_1447 - RelA/SpoT-related protein 1448 30.30 0 1480864..1481721 - 285 189184355 - OTT_1448 - hypothetical protein 1449 28.94 0 1481743..1482471 - 242 189184356 - OTT_1449 - hypothetical protein 1450 27.75 -1 1482821..1483537 - 238 189184357 - OTT_1450 - hypothetical protein 1451 32.66 0 1484740..1485036 + 98 189184358 - OTT_1451 - N6 adenine-specific DNA-methyltransferase 1452 30.34 0 1485052..1485552 - 166 189184359 - OTT_1452 - hypothetical protein 1453 31.01 0 1485654..1486298 - 214 189184360 - OTT_1453 - ankyrin repeat-containing protein 03_11 1454 31.82 0 1486336..1486731 - 131 189184361 - OTT_1454 - RelA/SpoT-related protein 1455 28.72 0 1487257..1487646 + 129 189184362 - OTT_1455 - transposase 1456 33.33 0 1488476..1490290 + 604 189184363 nrdA OTT_1456 - ribonucleoside-diphosphate reductase alpha chain 1457 31.57 0 1490268..1491347 + 359 189184364 nrdB OTT_1457 - ribonucleoside-diphosphate reductase beta chain 1458 28.21 -1 1491796..1492146 + 116 189184365 - OTT_1458 - hypothetical protein 1459 27.19 -1 1492516..1492743 + 75 189184366 - OTT_1459 - putative integrase 1460 30.06 0 1492841..1494550 + 569 189184367 abcT2 OTT_1460 - ABC transporter ATP-binding protein 1461 25.86 -1 1494519..1494866 + 115 189184368 - OTT_1461 - hypothetical protein 1462 33.33 0 1494983..1495195 + 70 189184369 - OTT_1462 - hypothetical protein 1463 34.88 +1 1495824..1495952 + 42 189184370 - OTT_1463 - replicative DNA helicase 1464 31.68 0 1495966..1497420 + 484 189184371 - OTT_1464 - replicative DNA helicase 1465 31.54 0 1497782..1498282 + 166 189184372 - OTT_1465 - ankyrin repeat-containing protein 03_12 1466 31.94 0 1498380..1498883 + 167 189184373 - OTT_1466 - hypothetical protein 1467 29.75 0 1498887..1499696 - 269 189184374 - OTT_1467 - N6 adenine-specific DNA-methyltransferase 1468 29.03 0 1500063..1500341 + 92 189184375 - OTT_1468 - hypothetical protein 1469 27.88 -1 1500406..1500900 + 164 189184376 - OTT_1469 - hypothetical protein 1470 31.64 0 1500931..1501107 + 58 189184377 - OTT_1470 - hypothetical protein 1471 29.98 0 1501322..1501828 - 168 189184378 - OTT_1471 - transposase 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0