version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1288 30.47 0 1307235..1307513 - 92 189184195 - OTT_1288 - hypothetical protein 1289 29.98 0 1307770..1308276 - 168 189184196 - OTT_1289 - transposase 1290 28.80 0 1308263..1308637 - 124 189184197 - OTT_1290 - transposase 1291 31.68 0 1309151..1309633 - 160 189184198 - OTT_1291 - hypothetical protein 1292 29.35 0 1309685..1310563 - 292 189184199 - OTT_1292 - hypothetical protein 1293 28.32 -1 1310760..1311038 + 92 189184200 - OTT_1293 - transposase 1294 27.96 -1 1312145..1312684 + 179 189184201 - OTT_1294 - transposase 1295 31.46 0 1313305..1313784 + 159 189184202 greA OTT_1295 - GreA protein 1296 32.78 0 1313831..1314730 + 299 189184203 rpoH OTT_1296 - heat shock sigma factor RpoH 1297 31.31 0 1315420..1315962 - 180 189184204 - OTT_1297 - hypothetical protein 1298 24.75 -2 1317706..1318008 - 100 189184205 - OTT_1298 - transposase 1299 33.56 0 1318020..1318457 - 145 189184206 - OTT_1299 - transposase 1300 33.94 0 1318892..1320379 - 495 189184207 - OTT_1300 - ankyrin repeat-containing protein 12_02 1301 34.17 0 1320707..1321063 + 118 189184208 - OTT_1301 - putative conjugative transfer protein TraC 1302 36.42 +1 1321155..1321316 + 53 189184209 - OTT_1302 - putative conjugative transfer protein TraC 1303 35.54 +1 1321388..1322383 + 331 189184210 - OTT_1303 - putative conjugative transfer protein TraC 1304 32.50 0 1322449..1322928 + 159 189184211 - OTT_1304 - putative conjugative transfer protein TraN 1305 34.18 0 1322915..1323619 + 234 189184212 - OTT_1305 - putative conjugative transfer protein TraN 1306 33.77 0 1323892..1325031 - 379 189184213 - OTT_1306 - reverse transcriptase 1307 41.35 +2 1325144..1325455 + 103 189184214 - OTT_1307 - hypothetical protein 1308 27.71 -1 1325793..1326023 - 76 189184215 - OTT_1308 - transposase 1309 29.84 0 1326884..1327312 + 142 189184216 - OTT_1309 - putative conjugative transfer protein TraA 1310 32.52 0 1327385..1327630 + 81 189184217 - OTT_1310 - putative conjugative transfer protein TraA 1311 29.14 0 1328136..1328612 - 158 189184218 - OTT_1311 - hypothetical protein 1312 31.33 0 1329545..1330093 - 182 189184219 cycM OTT_1312 - cytochrome c 1313 34.38 0 1330341..1331300 + 319 189184220 - OTT_1313 - hypothetical protein 1314 29.66 0 1332255..1332608 + 117 189184221 - OTT_1314 - transposase 1315 30.56 0 1332587..1333126 + 179 189184222 - OTT_1315 - transposase 1316 28.02 -1 1333629..1334645 - 338 189184223 mrp OTT_1316 - Mrp protein 1317 30.59 0 1334825..1335880 + 351 189184224 hflK OTT_1317 - HflK protein 1318 31.14 0 1335904..1336770 + 288 189184225 hflC OTT_1318 - HflC protein 1319 30.55 0 1336788..1338188 + 466 189184226 - OTT_1319 - 47 kDa protein (periplasmic serine protease) 1320 31.71 0 1338402..1339016 + 204 189184227 ompA OTT_1320 - peptidoglycan-associated lipoprotein 1321 30.89 0 1339280..1342063 - 927 189184228 - OTT_1321 - hypothetical protein 1322 34.02 0 1342262..1343278 + 338 189184229 trxB2 OTT_1322 - thioredoxin reductase 1323 30.91 0 1343275..1344180 + 301 189184230 folD OTT_1323 - methylenetetrahydrofolate dehydrogenase 1324 25.32 -1 1344115..1345500 - 461 189184231 - OTT_1324 - hypothetical protein 1325 30.80 0 1345500..1347866 - 788 189184232 topA OTT_1325 - DNA topoisomerase I 1326 32.71 0 1347959..1348915 - 318 189184233 mdh OTT_1326 - malate dehydrogenase 1327 27.27 -1 1349135..1349629 - 164 189184234 rimM OTT_1327 - 16S rRNA processing protein RimM 1328 27.17 -1 1349798..1352329 + 843 189184235 - OTT_1328 - hypothetical protein 1329 32.89 0 1352544..1353452 - 302 189184236 fmt OTT_1329 - methionyl-tRNA formyltransferase 1330 31.32 0 1353464..1354009 - 181 189184237 def OTT_1330 - methionyl-tRNA deformylase 1331 33.90 0 1354192..1356669 + 825 189184238 - OTT_1331 - putative conjugative transfer protein TraI 1332 33.33 0 1356721..1357740 + 339 189184239 - OTT_1332 - putative transposase 1333 33.15 0 1357750..1358280 - 176 189184240 - OTT_1333 - putative conjugative transfer protein TraD 1334 31.87 0 1358960..1359985 + 341 189184241 - OTT_1334 - hypothetical protein 1335 27.24 -1 1360166..1360411 + 81 189184242 - OTT_1335 - hypothetical protein 1336 38.63 +2 1360633..1361217 + 194 189184243 - OTT_1336 - hypothetical protein 1337 27.28 -1 1361244..1362797 - 517 189184244 ppiD OTT_1337 - peptidyl-prolyl cis-trans isomerse D 1338 29.07 0 1362877..1363626 + 249 189184245 tpiA OTT_1338 - triosephosphate isomerase 1339 27.89 -1 1363632..1363925 + 97 189184246 secG OTT_1339 - protein-export membrane protein SecG 1340 30.61 0 1364689..1366269 - 526 189184247 lysS OTT_1340 - lysyl-tRNA synthetase 1341 26.96 -1 1366408..1366956 + 182 189184248 - OTT_1341 - hypothetical protein 1342 31.14 0 1366919..1367464 + 181 189184249 coq7 OTT_1342 - ubiquinone biosynthesis protein Coq7 1343 33.62 0 1367565..1368257 + 230 189184250 psd OTT_1343 - phosphatidylserine decarboxylase 1344 29.33 0 1368309..1369082 + 257 189184251 pssA OTT_1344 - CDP-diacylglycerol--serine O-phosphatidyltransferase 1345 29.63 0 1369132..1369617 + 161 189184252 - OTT_1345 - hypothetical protein 1346 27.24 -1 1369897..1372737 + 946 189184253 - OTT_1346 - hypothetical protein 1347 26.22 -1 1372929..1374602 - 557 189184254 nuoN3 OTT_1347 - NADH dehydrogenase I chain N 1348 36.29 +1 1374671..1375549 - 292 189184255 sucD OTT_1348 - succinyl-CoA synthetase alpha chain 1349 32.39 0 1375564..1376724 - 386 189184256 sucC OTT_1349 - succinyl-CoA synthetase beta chain 1350 28.98 0 1376781..1378043 - 420 189184257 ubiH OTT_1350 - UbiH protein 1351 31.29 0 1378398..1378985 - 195 189184258 - OTT_1351 - hypothetical protein 1352 31.87 0 1379113..1382316 - 1067 189184259 ileS OTT_1352 - isoleucyl-tRNA synthetase 1353 29.54 0 1382353..1382958 - 201 189184260 - OTT_1353 - hypothetical protein 1354 40.58 +2 1383129..1383335 + 68 189184261 rpsU OTT_1354 - 30S ribosomal protein S21 1355 26.27 -1 1383364..1383873 - 169 189184262 holC OTT_1355 - DNA polymerase III chi subunit HolC 1356 30.92 0 1383968..1385209 + 413 189184263 proP4 OTT_1356 - proline/betaine transporter 1357 27.96 -1 1385453..1386178 + 241 189184264 - OTT_1357 - hypothetical protein 1358 33.89 0 1386270..1387523 + 417 189184265 - OTT_1358 - hypothetical protein 1359 33.60 0 1387684..1388061 + 125 189184266 - OTT_1359 - hypothetical protein 1360 32.43 0 1388283..1390493 - 736 189184267 pnp OTT_1360 - polyribonucleotide nucleotidyltransferase 1361 30.74 0 1390758..1391027 - 89 189184268 rpsO OTT_1361 - 30S ribosomal protein S15 1362 32.78 0 1391051..1391959 - 302 189184269 truB OTT_1362 - tRNA pseudouridine 55 synthase 1363 32.30 0 1392234..1393202 + 322 189184270 - OTT_1363 - transposase 1364 30.60 0 1393495..1394043 - 182 189184271 - OTT_1364 - transposase 1365 30.39 0 1394600..1395040 - 146 189184272 - OTT_1365 - hypothetical protein 1366 26.67 -1 1395637..1395966 - 109 189184273 - OTT_1366 - hypothetical protein 1367 29.71 0 1395944..1396219 - 91 189184274 - OTT_1367 - putative conjugative transfer protein TraD 1368 33.61 0 1396185..1396544 - 119 189184275 - OTT_1368 - putative conjugative transfer protein TraD 1369 31.30 0 1396605..1396949 - 114 189184276 - OTT_1369 - putative conjugative transfer protein TraD 1370 26.36 -1 1397244..1397630 - 128 189184277 - OTT_1370 - TPR repeat-containing protein 01_08 1371 34.91 +1 1397818..1398261 - 147 189184278 - OTT_1371 - putative conjugative transfer protein TraG 1372 32.30 0 1398344..1399312 - 322 189184279 - OTT_1372 - transposase 1373 37.50 +1 1399483..1399818 - 111 189184280 - OTT_1373 - putative conjugative transfer protein TraG 1374 32.72 0 1399818..1400303 - 161 189184281 - OTT_1374 - putative conjugative transfer protein TraH 1375 36.83 +1 1400492..1401121 - 209 189184282 - OTT_1375 - putative conjugative transfer protein TraH 1376 33.33 0 1401887..1402111 + 74 189184283 infA OTT_1376 - translation initiation factor IF-1 1377 31.66 0 1402154..1402750 + 198 189184284 maf OTT_1377 - septum formation associated protein Maf 1378 32.13 0 1402877..1403626 + 249 189184285 - OTT_1378 - hypothetical protein 1379 32.23 0 1403728..1406445 + 905 189184286 gyrA OTT_1379 - DNA gyrase subunit A 1380 31.62 0 1406479..1407759 + 426 189184287 glyA OTT_1380 - serine hydroxymethyltransferase 1381 27.04 -1 1408449..1410941 - 830 189184288 - OTT_1381 - hypothetical protein 1382 26.67 -1 1411177..1411716 - 179 189184289 rnpA OTT_1382 - ribonuclease P 1383 41.48 +2 1411717..1411851 - 44 189184290 rpmH OTT_1383 - 50S ribosomal protein L34 1384 33.21 0 1412734..1413528 + 264 189184291 fbcH OTT_1384 - cytochrome c1, heme protein precursor 1385 35.05 +1 1414017..1414772 - 251 189184292 rph OTT_1385 - ribonuclease PH 1386 29.65 0 1414902..1415498 + 198 189184293 grpE OTT_1386 - heat shock protein GrpE 1387 28.79 0 1415868..1415999 - 43 189184294 - OTT_1387 - transposase 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0