version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1211 27.22 -1 1239839..1240165 + 108 189184118 - OTT_1211 - hypothetical protein 1212 26.79 -1 1240305..1240472 + 55 189184119 - OTT_1212 - TPR repeat-containing protein 06_01 1213 30.07 0 1240525..1240677 + 50 189184120 - OTT_1213 - hypothetical protein 1214 31.94 0 1240737..1240952 + 71 189184121 - OTT_1214 - TPR repeat-containing protein 02_02 1215 35.17 +1 1243046..1247572 + 1508 189184122 - OTT_1215 - outer membrane protein 1216 32.20 0 1248560..1248736 - 58 189184123 - OTT_1216 - hypothetical protein 1217 29.47 0 1248991..1249197 - 68 189184124 - OTT_1217 - putative integrase 1218 32.37 0 1250403..1250816 + 137 189184125 - OTT_1218 - transposase 1219 26.26 -1 1250770..1250967 + 65 189184126 - OTT_1219 - transposase 1220 31.25 0 1252352..1252975 + 207 189184127 - OTT_1220 - replicative DNA helicase 1221 30.03 0 1253200..1253775 + 191 189184128 - OTT_1221 - RelA/SpoT-related protein 1222 29.47 0 1254514..1256664 + 716 189184129 - OTT_1222 - repeat-containing protein F 1223 32.06 0 1257316..1258101 + 261 189184130 - OTT_1223 - exodeoxyribonuclease III 1224 35.53 +1 1258143..1258598 - 151 189184131 - OTT_1224 - putative conjugative transfer protein TraD 1225 33.12 0 1258894..1259850 + 318 189184132 - OTT_1225 - putative conjugative transfer protein TraA 1226 27.18 -1 1259955..1260425 - 156 189184133 - OTT_1226 - peroxiredoxin, AhpC/TSA family protein 1227 28.33 0 1260428..1261567 - 379 189184134 - OTT_1227 - putative integrase 1228 36.33 +1 1261999..1262265 + 88 189184135 - OTT_1228 - putative conjugative transfer protein TraD 1229 30.83 0 1262503..1262622 - 39 189184136 - OTT_1229 - transposase 1230 31.82 0 1263071..1266508 + 1145 189184137 - OTT_1230 - sensor histidine kinase/response regulator/transporter hybrid protein 1231 26.85 -1 1267215..1267322 + 35 189184138 - OTT_1231 - transposase 1232 27.74 -1 1268108..1269037 + 309 189184139 - OTT_1232 - ankyrin repeat-containing protein 15 1233 34.33 0 1269030..1269230 + 66 189184140 - OTT_1233 - hypothetical protein 1234 39.60 +2 1269415..1269717 - 100 189184141 - OTT_1234 - hypothetical protein 1235 33.77 0 1269701..1270840 + 379 189184142 - OTT_1235 - reverse transcriptase 1236 32.69 0 1271358..1271513 - 51 189184143 - OTT_1236 - ankyrin repeat-containing protein 03_10 1237 33.86 0 1271866..1273005 - 379 189184144 - OTT_1237 - reverse transcriptase 1238 39.00 +2 1272989..1273288 + 99 189184145 - OTT_1238 - hypothetical protein 1239 32.27 0 1273546..1273827 + 93 189184146 - OTT_1239 - hypothetical protein 1240 29.68 0 1273837..1274466 - 209 189184147 - OTT_1240 - N6 adenine-specific DNA-methyltransferase 1241 27.58 -1 1275196..1275855 + 219 189184148 - OTT_1241 - hypothetical protein 1242 33.33 0 1276297..1276584 - 95 189184149 - OTT_1242 - RelA/SpoT-related protein 1243 30.73 0 1276841..1277032 - 63 189184150 - OTT_1243 - putative conjugative transfer protein TraB 1244 31.48 0 1277073..1277180 - 35 189184151 - OTT_1244 - putative conjugative transfer protein TraB 1245 27.35 -1 1277677..1278345 + 222 189184152 gst OTT_1245 - glutathione S-transferase 1246 25.77 -1 1278931..1279419 - 162 189184153 nusB OTT_1246 - N utilization substance protein B 1247 31.53 0 1279431..1280702 - 423 189184154 hisS OTT_1247 - histidyl-tRNA synthetase 1248 30.04 0 1280705..1281190 - 161 189184155 - OTT_1248 - ABC transport system substrate-binding protein 1249 27.55 -1 1281195..1281557 - 120 189184156 - OTT_1249 - hypothetical protein 1250 32.15 0 1281529..1282035 - 168 189184157 rnhA OTT_1250 - ribonuclease H 1251 27.46 -1 1282035..1282562 - 175 189184158 - OTT_1251 - hypothetical protein 1252 27.39 -1 1282691..1283515 - 274 189184159 dsbA OTT_1252 - thiol:disulfide interchange protein 1253 35.51 +1 1283644..1283964 - 106 189184160 fdxA OTT_1253 - ferredoxin 1254 30.24 0 1283970..1284680 - 236 189184161 ccmC OTT_1254 - heme exporter protein C 1255 29.78 0 1284673..1285404 - 243 189184162 - OTT_1255 - hypothetical protein 1256 27.80 -1 1285403..1286233 + 276 189184163 glnA OTT_1256 - glutamine synthetase 1257 26.74 -1 1286631..1286903 - 90 189184164 - OTT_1257 - transposase 1258 27.19 -1 1287877..1288104 + 75 189184165 - OTT_1258 - putative integrase 1259 28.40 0 1288151..1288312 + 53 189184166 - OTT_1259 - putative integrase 1260 27.18 -1 1288315..1288785 + 156 189184167 - OTT_1260 - peroxiredoxin, AhpC/TSA family protein 1261 36.73 +1 1288865..1289188 + 107 189184168 - OTT_1261 - hypothetical protein 1262 31.04 0 1289188..1289580 + 130 189184169 - OTT_1262 - putative conjugative transfer protein TraE 1263 32.29 0 1289677..1290639 - 320 189184170 - OTT_1263 - transposase 1264 36.08 +1 1291020..1291601 + 193 189184171 - OTT_1264 - putative conjugative transfer protein TraC 1265 37.28 +1 1291800..1292078 + 92 189184172 - OTT_1265 - putative conjugative transfer protein TraC 1266 33.94 0 1292075..1292734 + 219 189184173 - OTT_1266 - putative conjugative transfer protein TraW 1267 29.41 0 1292821..1293024 + 67 189184174 - OTT_1267 - hypothetical protein 1268 38.65 +2 1293025..1294002 + 325 189184175 - OTT_1268 - putative conjugative transfer protein TraU 1269 29.69 0 1294025..1294408 + 127 189184176 - OTT_1269 - putative conjugative transfer protein TrbC 1270 33.33 0 1294405..1296096 + 563 189184177 - OTT_1270 - putative conjugative transfer protein TraN 1271 34.33 0 1296255..1297055 + 266 189184178 - OTT_1271 - ankyrin repeat-containing protein 16 1272 35.43 +1 1297392..1297868 + 158 189184179 - OTT_1272 - putative conjugative transfer protein TraF 1273 39.60 +2 1298053..1298355 - 100 189184180 - OTT_1273 - hypothetical protein 1274 34.12 0 1298339..1299478 + 379 189184181 - OTT_1274 - reverse transcriptase 1275 37.02 +1 1299891..1300784 + 297 189184182 - OTT_1275 - putative conjugative transfer protein TraH 1276 28.74 0 1300708..1300968 + 86 189184183 - OTT_1276 - putative conjugative transfer protein TraH 1277 31.84 0 1300949..1301482 + 177 189184184 - OTT_1277 - putative conjugative transfer protein TraD 1278 32.15 0 1301221..1302066 - 281 189184185 - OTT_1278 - putative conjugative transfer protein TraI 1279 35.34 +1 1302432..1302779 - 115 189184186 - OTT_1279 - putative conjugative transfer protein TraA 1280 35.93 +1 1302764..1302994 - 76 189184187 - OTT_1280 - putative conjugative transfer protein TraA 1281 38.60 +2 1303007..1303177 + 56 189184188 - OTT_1281 - putative conjugative transfer protein TraD 1282 30.62 0 1303292..1304323 + 343 189184189 - OTT_1282 - hypothetical protein 1283 28.04 -1 1304615..1304803 - 62 189184190 - OTT_1283 - RelA/SpoT-related protein 1284 30.63 0 1304908..1305240 - 110 189184191 - OTT_1284 - RelA/SpoT-related protein 1285 29.00 0 1305395..1305763 - 122 189184192 - OTT_1285 - hypothetical protein 1286 29.45 0 1305786..1306454 - 222 189184193 - OTT_1286 - hypothetical protein 1287 30.06 0 1306469..1307170 - 233 189184194 - OTT_1287 - hypothetical protein 1288 30.47 0 1307235..1307513 - 92 189184195 - OTT_1288 - hypothetical protein 1289 29.98 0 1307770..1308276 - 168 189184196 - OTT_1289 - transposase 1290 28.80 0 1308263..1308637 - 124 189184197 - OTT_1290 - transposase 1291 31.68 0 1309151..1309633 - 160 189184198 - OTT_1291 - hypothetical protein 1292 29.35 0 1309685..1310563 - 292 189184199 - OTT_1292 - hypothetical protein 1293 28.32 -1 1310760..1311038 + 92 189184200 - OTT_1293 - transposase 1294 27.96 -1 1312145..1312684 + 179 189184201 - OTT_1294 - transposase 1295 31.46 0 1313305..1313784 + 159 189184202 greA OTT_1295 - GreA protein 1296 32.78 0 1313831..1314730 + 299 189184203 rpoH OTT_1296 - heat shock sigma factor RpoH 1297 31.31 0 1315420..1315962 - 180 189184204 - OTT_1297 - hypothetical protein 1298 24.75 -2 1317706..1318008 - 100 189184205 - OTT_1298 - transposase 1299 33.56 0 1318020..1318457 - 145 189184206 - OTT_1299 - transposase 1300 33.94 0 1318892..1320379 - 495 189184207 - OTT_1300 - ankyrin repeat-containing protein 12_02 1301 34.17 0 1320707..1321063 + 118 189184208 - OTT_1301 - putative conjugative transfer protein TraC 1302 36.42 +1 1321155..1321316 + 53 189184209 - OTT_1302 - putative conjugative transfer protein TraC 1303 35.54 +1 1321388..1322383 + 331 189184210 - OTT_1303 - putative conjugative transfer protein TraC 1304 32.50 0 1322449..1322928 + 159 189184211 - OTT_1304 - putative conjugative transfer protein TraN 1305 34.18 0 1322915..1323619 + 234 189184212 - OTT_1305 - putative conjugative transfer protein TraN 1306 33.77 0 1323892..1325031 - 379 189184213 - OTT_1306 - reverse transcriptase 1307 41.35 +2 1325144..1325455 + 103 189184214 - OTT_1307 - hypothetical protein 1308 27.71 -1 1325793..1326023 - 76 189184215 - OTT_1308 - transposase 1309 29.84 0 1326884..1327312 + 142 189184216 - OTT_1309 - putative conjugative transfer protein TraA 1310 32.52 0 1327385..1327630 + 81 189184217 - OTT_1310 - putative conjugative transfer protein TraA 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0