version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1162 29.66 0 1190717..1191097 + 126 189184069 yajC OTT_1162 - preprotein translocase, YajC subunit 1163 30.20 0 1191094..1192656 + 520 189184070 secD OTT_1163 - protein-export membrane protein SecD 1164 33.95 0 1193053..1194192 - 379 189184071 - OTT_1164 - reverse transcriptase 1165 41.72 +2 1194176..1194616 + 146 189184072 - OTT_1165 - hypothetical protein 1166 29.06 0 1194947..1195063 - 38 189184073 - OTT_1166 - transposase 1167 36.11 +1 1195269..1195376 + 35 189184074 - OTT_1167 - transposase 1168 28.40 0 1195613..1196017 + 134 189184075 - OTT_1168 - transposase 1169 33.33 0 1196038..1196475 + 145 189184076 - OTT_1169 - transposase 1170 32.00 0 1197282..1198484 - 400 189184077 aatA OTT_1170 - aspartate aminotransferase 1171 28.61 0 1198591..1199628 + 345 189184078 - OTT_1171 - hypothetical protein 1172 26.86 -1 1199688..1200521 + 277 189184079 vacJ OTT_1172 - Vacj lipoprotein precursor 1173 25.21 -1 1200518..1201108 + 196 189184080 - OTT_1173 - hypothetical protein 1174 30.92 0 1201136..1202338 + 400 189184081 hemN OTT_1174 - oxygen-independent coproporphyrinogen III oxidase 1175 32.55 0 1202379..1202891 + 170 189184082 - OTT_1175 - hypothetical protein 1176 26.45 -1 1202951..1203676 + 241 189184083 recO OTT_1176 - DNA repair protein RecO 1177 33.00 0 1204250..1204552 + 100 189184084 - OTT_1177 - transposase 1178 28.35 0 1204506..1204886 + 126 189184085 - OTT_1178 - transposase 1179 28.04 -1 1205408..1205596 - 62 189184086 - OTT_1179 - putative integrase 1180 29.27 0 1205660..1205782 - 40 189184087 - OTT_1180 - putative integrase 1181 31.71 0 1205769..1205891 - 40 189184088 - OTT_1181 - putative integrase 1182 27.16 -1 1206651..1206974 - 107 189184089 - OTT_1182 - hypothetical protein 1183 30.69 0 1207012..1207692 - 226 189184090 radC OTT_1183 - DNA repair protein RadC 1184 39.52 +2 1207941..1208312 + 123 189184091 rpsL OTT_1184 - 30S ribosomal protein S12 1185 32.95 0 1208337..1208858 + 173 189184092 rpsG OTT_1185 - 30S ribosomal protein S7 1186 34.98 +1 1208862..1210982 + 706 189184093 fusA OTT_1186 - translation elongation factor G 1187 32.32 0 1211233..1212708 + 491 189184094 rpsA OTT_1187 - 30S ribosomal protein S1 1188 29.31 0 1213884..1214057 + 57 189184095 - OTT_1188 - transposase 1189 35.15 +1 1215031..1215195 - 54 189184096 - OTT_1189 - transposase 1190 38.74 +2 1216320..1216541 - 73 189184097 cspA OTT_1190 - cold shock protein 1191 27.91 -1 1218259..1219125 + 288 189184098 - OTT_1191 - hypothetical protein 1192 31.82 0 1219828..1221678 + 616 189184099 - OTT_1192 - hypothetical protein 1193 28.23 -1 1221915..1222286 + 123 189184100 pkcI OTT_1193 - protein kinase C inhibitor 1 1194 29.48 0 1222346..1223383 + 345 189184101 asd OTT_1194 - aspartate-semialdehyde dehydrogenase 1195 30.56 0 1223524..1224462 - 312 189184102 ctaB OTT_1195 - cytochrome c oxidase assembly factor 1196 35.66 +1 1224473..1226059 - 528 189184103 coxA OTT_1196 - cytochrome c oxidase polypeptide I 1197 30.45 0 1226252..1227673 - 473 189184104 - OTT_1197 - hypothetical protein 1198 36.22 +1 1228005..1228628 + 207 189184105 rplY OTT_1198 - 50S ribosomal protein L25 1199 30.66 0 1228628..1229188 + 186 189184106 pth OTT_1199 - peptidyl-tRNA hydrolase 1200 33.97 0 1229198..1230298 + 366 189184107 - OTT_1200 - GTP-binding protein, Era/Obg family 1201 30.06 0 1231669..1232463 + 264 189184108 xthA2 OTT_1201 - exodeoxyribonuclease III 1202 30.86 0 1233595..1233756 + 53 189184109 - OTT_1202 - hypothetical protein 1203 34.04 0 1234054..1235193 - 379 189184110 - OTT_1203 - reverse transcriptase 1204 41.72 +2 1235177..1235617 + 146 189184111 - OTT_1204 - hypothetical protein 1205 30.50 0 1235733..1236014 + 93 189184112 - OTT_1205 - hypothetical protein 1206 30.26 0 1236018..1236830 - 270 189184113 - OTT_1206 - N6 adenine-specific DNA-methyltransferase 1207 30.58 0 1237989..1238606 + 205 189184114 - OTT_1207 - putative integrase 1208 32.72 0 1238585..1238908 + 107 189184115 - OTT_1208 - putative integrase 1209 36.73 +1 1238966..1239289 + 107 189184116 - OTT_1209 - hypothetical protein 1210 32.06 0 1239289..1239681 + 130 189184117 - OTT_1210 - putative conjugative transfer protein TraE 1211 27.22 -1 1239839..1240165 + 108 189184118 - OTT_1211 - hypothetical protein 1212 26.79 -1 1240305..1240472 + 55 189184119 - OTT_1212 - TPR repeat-containing protein 06_01 1213 30.07 0 1240525..1240677 + 50 189184120 - OTT_1213 - hypothetical protein 1214 31.94 0 1240737..1240952 + 71 189184121 - OTT_1214 - TPR repeat-containing protein 02_02 1215 35.17 +1 1243046..1247572 + 1508 189184122 - OTT_1215 - outer membrane protein 1216 32.20 0 1248560..1248736 - 58 189184123 - OTT_1216 - hypothetical protein 1217 29.47 0 1248991..1249197 - 68 189184124 - OTT_1217 - putative integrase 1218 32.37 0 1250403..1250816 + 137 189184125 - OTT_1218 - transposase 1219 26.26 -1 1250770..1250967 + 65 189184126 - OTT_1219 - transposase 1220 31.25 0 1252352..1252975 + 207 189184127 - OTT_1220 - replicative DNA helicase 1221 30.03 0 1253200..1253775 + 191 189184128 - OTT_1221 - RelA/SpoT-related protein 1222 29.47 0 1254514..1256664 + 716 189184129 - OTT_1222 - repeat-containing protein F 1223 32.06 0 1257316..1258101 + 261 189184130 - OTT_1223 - exodeoxyribonuclease III 1224 35.53 +1 1258143..1258598 - 151 189184131 - OTT_1224 - putative conjugative transfer protein TraD 1225 33.12 0 1258894..1259850 + 318 189184132 - OTT_1225 - putative conjugative transfer protein TraA 1226 27.18 -1 1259955..1260425 - 156 189184133 - OTT_1226 - peroxiredoxin, AhpC/TSA family protein 1227 28.33 0 1260428..1261567 - 379 189184134 - OTT_1227 - putative integrase 1228 36.33 +1 1261999..1262265 + 88 189184135 - OTT_1228 - putative conjugative transfer protein TraD 1229 30.83 0 1262503..1262622 - 39 189184136 - OTT_1229 - transposase 1230 31.82 0 1263071..1266508 + 1145 189184137 - OTT_1230 - sensor histidine kinase/response regulator/transporter hybrid protein 1231 26.85 -1 1267215..1267322 + 35 189184138 - OTT_1231 - transposase 1232 27.74 -1 1268108..1269037 + 309 189184139 - OTT_1232 - ankyrin repeat-containing protein 15 1233 34.33 0 1269030..1269230 + 66 189184140 - OTT_1233 - hypothetical protein 1234 39.60 +2 1269415..1269717 - 100 189184141 - OTT_1234 - hypothetical protein 1235 33.77 0 1269701..1270840 + 379 189184142 - OTT_1235 - reverse transcriptase 1236 32.69 0 1271358..1271513 - 51 189184143 - OTT_1236 - ankyrin repeat-containing protein 03_10 1237 33.86 0 1271866..1273005 - 379 189184144 - OTT_1237 - reverse transcriptase 1238 39.00 +2 1272989..1273288 + 99 189184145 - OTT_1238 - hypothetical protein 1239 32.27 0 1273546..1273827 + 93 189184146 - OTT_1239 - hypothetical protein 1240 29.68 0 1273837..1274466 - 209 189184147 - OTT_1240 - N6 adenine-specific DNA-methyltransferase 1241 27.58 -1 1275196..1275855 + 219 189184148 - OTT_1241 - hypothetical protein 1242 33.33 0 1276297..1276584 - 95 189184149 - OTT_1242 - RelA/SpoT-related protein 1243 30.73 0 1276841..1277032 - 63 189184150 - OTT_1243 - putative conjugative transfer protein TraB 1244 31.48 0 1277073..1277180 - 35 189184151 - OTT_1244 - putative conjugative transfer protein TraB 1245 27.35 -1 1277677..1278345 + 222 189184152 gst OTT_1245 - glutathione S-transferase 1246 25.77 -1 1278931..1279419 - 162 189184153 nusB OTT_1246 - N utilization substance protein B 1247 31.53 0 1279431..1280702 - 423 189184154 hisS OTT_1247 - histidyl-tRNA synthetase 1248 30.04 0 1280705..1281190 - 161 189184155 - OTT_1248 - ABC transport system substrate-binding protein 1249 27.55 -1 1281195..1281557 - 120 189184156 - OTT_1249 - hypothetical protein 1250 32.15 0 1281529..1282035 - 168 189184157 rnhA OTT_1250 - ribonuclease H 1251 27.46 -1 1282035..1282562 - 175 189184158 - OTT_1251 - hypothetical protein 1252 27.39 -1 1282691..1283515 - 274 189184159 dsbA OTT_1252 - thiol:disulfide interchange protein 1253 35.51 +1 1283644..1283964 - 106 189184160 fdxA OTT_1253 - ferredoxin 1254 30.24 0 1283970..1284680 - 236 189184161 ccmC OTT_1254 - heme exporter protein C 1255 29.78 0 1284673..1285404 - 243 189184162 - OTT_1255 - hypothetical protein 1256 27.80 -1 1285403..1286233 + 276 189184163 glnA OTT_1256 - glutamine synthetase 1257 26.74 -1 1286631..1286903 - 90 189184164 - OTT_1257 - transposase 1258 27.19 -1 1287877..1288104 + 75 189184165 - OTT_1258 - putative integrase 1259 28.40 0 1288151..1288312 + 53 189184166 - OTT_1259 - putative integrase 1260 27.18 -1 1288315..1288785 + 156 189184167 - OTT_1260 - peroxiredoxin, AhpC/TSA family protein 1261 36.73 +1 1288865..1289188 + 107 189184168 - OTT_1261 - hypothetical protein 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0