version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1054 32.25 0 1088942..1089310 + 122 189183961 rplN OTT_1054 - 50S ribosomal protein L14 1055 30.19 0 1089312..1089629 + 105 189183962 rplX OTT_1055 - 50S ribosomal protein L24 1056 29.47 0 1089654..1090223 + 189 189183963 rplE OTT_1056 - 50S ribosomal protein L5 1057 32.35 0 1090242..1090547 + 101 189183964 rpsN OTT_1057 - 30S ribosomal protein S14 1058 30.85 0 1090570..1090971 + 133 189183965 rpsH OTT_1058 - 30S ribosomal protein S8 1059 29.96 0 1090999..1091532 + 177 189183966 rplF OTT_1059 - 50S ribosomal protein L6 1060 31.20 0 1091546..1091920 + 124 189183967 rplR OTT_1060 - 50S ribosomal protein L18 1061 35.44 +1 1091941..1092462 + 173 189183968 rpsE OTT_1061 - 30S ribosomal protein S5 1062 24.44 -2 1092462..1092596 + 44 189183969 - OTT_1062 - hypothetical protein 1063 28.86 0 1092695..1093186 + 163 189183970 rplO OTT_1063 - 50S ribosomal protein L15 1064 30.20 0 1093188..1094495 + 435 189183971 secY OTT_1064 - preprotein translocase SecY subunit 1065 27.60 -1 1094492..1095136 + 214 189183972 adk OTT_1065 - adenylate kinase 1066 32.01 0 1095216..1095593 + 125 189183973 rpsM OTT_1066 - 30S ribosomal protein S13 1067 33.33 0 1095603..1095983 + 126 189183974 rpsK OTT_1067 - 30S ribosomal protein S11 1068 30.81 0 1096032..1097060 + 342 189183975 rpoA OTT_1068 - DNA-directed RNA polymerase alpha chain 1069 32.19 0 1097079..1097516 + 145 189183976 rplQ OTT_1069 - 50S ribosomal protein L17 1070 28.21 -1 1097598..1097870 + 90 189183977 rpsT OTT_1070 - 30S ribosomal protein S20 1071 29.11 0 1097935..1099995 + 686 189183978 ptrB OTT_1071 - protease II 1072 30.28 0 1100020..1101231 + 403 189183979 - OTT_1072 - 5-aminolevulinic acid synthase 1073 25.64 -1 1101241..1102293 - 350 189183980 perM OTT_1073 - permease protein PerM 1074 27.30 -1 1102587..1103183 + 198 189183981 pgpA OTT_1074 - phosphatidylglycerophosphatase A 1075 32.73 0 1103243..1103743 + 166 189183982 cinA OTT_1075 - competence-damaged protein CinA 1076 32.56 0 1103791..1104693 + 300 189183983 thyA OTT_1076 - Thy1 protein 1077 27.64 -1 1108251..1108952 + 233 189183984 virB8 OTT_1077 - type IV secretion system protein VirB8 1078 28.08 -1 1108942..1109703 + 253 189183985 trbG OTT_1078 - conjugal transfer protein TrbG precursor 1079 31.54 0 1109959..1110348 - 129 189183986 - OTT_1079 - hypothetical protein 1080 30.59 0 1110451..1111398 + 315 189183987 ftsY OTT_1080 - signal recognition particle receptor FtsY 1081 27.58 -1 1114352..1114855 + 167 189183988 - OTT_1081 - hypothetical protein 1082 29.51 0 1114868..1115782 + 304 189183989 tlyC OTT_1082 - hemolysin C 1083 31.56 0 1115832..1116395 - 187 189183990 ubiX OTT_1083 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1084 28.71 0 1116879..1118348 + 489 189183991 - OTT_1084 - putative response regulator protein 1085 30.28 0 1118707..1119132 - 141 189183992 apaG OTT_1085 - ApaG protein 1086 30.03 0 1120371..1120703 + 110 189183993 - OTT_1086 - putative conjugative transfer protein TraA 1087 32.80 0 1120717..1121472 + 251 189183994 - OTT_1087 - putative conjugative transfer protein TraA 1088 35.45 +1 1121691..1122068 + 125 189183995 - OTT_1088 - putative conjugative transfer protein TraA 1089 27.91 -1 1122006..1122263 - 85 189183996 - OTT_1089 - ankyrin repeat-containing protein 10_03 1090 25.87 -1 1122302..1122703 - 133 189183997 - OTT_1090 - ankyrin repeat-containing protein 10_04 1091 33.90 0 1122738..1122914 + 58 189183998 - OTT_1091 - hypothetical protein 1092 33.54 0 1122923..1123909 - 328 189183999 - OTT_1092 - putative conjugative transfer protein TraD 1093 26.04 -1 1124212..1124595 - 127 189184000 - OTT_1093 - TPR repeat-containing protein 01_04 1094 29.13 0 1124589..1124897 - 102 189184001 - OTT_1094 - TPR repeat-containing protein 01_05 1095 30.63 0 1125046..1125156 - 36 189184002 - OTT_1095 - TPR repeat-containing protein 01_06 1096 25.31 -1 1125575..1125898 - 107 189184003 - OTT_1096 - hypothetical protein 1097 28.22 -1 1127057..1128073 - 338 189184004 ispB OTT_1097 - octaprenyl-diphosphate synthase 1098 25.67 -1 1128093..1129907 - 604 189184005 - OTT_1098 - hypothetical protein 1099 28.80 0 1129907..1131451 - 514 189184006 tlc3 OTT_1099 - ADP,ATP carrier protein homolog 1100 28.11 -1 1131604..1133136 - 510 189184007 tlc4 OTT_1100 - ADP,ATP carrier protein homolog 1101 28.89 0 1133652..1133966 - 104 189184008 - OTT_1101 - transposase 1102 29.07 0 1133915..1134313 - 132 189184009 - OTT_1102 - transposase 1103 35.19 +1 1134631..1134792 - 53 189184010 - OTT_1103 - putative conjugative transfer protein TraD 1104 29.17 0 1134977..1135168 + 63 189184011 - OTT_1104 - transposase 1105 31.84 0 1135310..1135576 + 88 189184012 - OTT_1105 - transposase 1106 31.88 0 1135577..1135783 + 68 189184013 - OTT_1106 - transposase 1107 32.23 0 1136871..1138409 - 512 189184014 aprE OTT_1107 - alkaline protease secretion protein AprE 1108 32.82 0 1138447..1140201 - 584 189184015 aprD OTT_1108 - alkaline protease secretion ATP-binding protein AprD 1109 27.85 -1 1141655..1143169 + 504 189184016 mviN OTT_1109 - virulence factor MviN 1110 25.98 -1 1143206..1143586 - 126 189184017 - OTT_1110 - hypothetical protein 1111 33.33 0 1144965..1146158 - 397 189184018 - OTT_1111 - hypothetical protein 1112 31.50 0 1146364..1147071 - 235 189184019 - OTT_1112 - ankyrin repeat-containing protein 03_08 1113 31.06 0 1147109..1147504 - 131 189184020 - OTT_1113 - RelA/SpoT-related protein 1114 32.58 0 1147914..1148045 - 43 189184021 - OTT_1114 - replicative DNA helicase 1115 30.33 0 1148553..1150082 + 509 189184022 - OTT_1115 - hypothetical protein 1116 31.94 0 1150091..1151527 + 478 189184023 - OTT_1116 - replicative DNA helicase 1117 31.57 0 1151941..1152336 + 131 189184024 - OTT_1117 - RelA/SpoT-related protein 1118 30.78 0 1152471..1153019 + 182 189184025 - OTT_1118 - ankyrin repeat-containing protein 03_09 1119 31.88 0 1153066..1153614 + 182 189184026 - OTT_1119 - hypothetical protein 1120 30.00 0 1153618..1154427 - 269 189184027 - OTT_1120 - N6 adenine-specific DNA-methyltransferase 1121 28.67 0 1154794..1155072 + 92 189184028 - OTT_1121 - hypothetical protein 1122 28.77 0 1155137..1155838 + 233 189184029 - OTT_1122 - hypothetical protein 1123 30.50 0 1155967..1156248 + 93 189184030 - OTT_1123 - hypothetical protein 1124 31.43 0 1156290..1156763 + 157 189184031 - OTT_1124 - hypothetical protein 1125 30.14 0 1156786..1157724 + 312 189184032 - OTT_1125 - hypothetical protein 1126 29.29 0 1157743..1158237 + 164 189184033 - OTT_1126 - hypothetical protein 1127 30.27 0 1158279..1158866 + 195 189184034 - OTT_1127 - RelA/SpoT-related protein 1128 30.07 0 1159093..1159950 + 285 189184035 - OTT_1128 - hypothetical protein 1129 33.33 0 1160117..1160293 - 58 189184036 - OTT_1129 - putative conjugative transfer protein TraD 1130 36.64 +1 1160637..1161029 + 130 189184037 - OTT_1130 - hypothetical protein 1131 34.00 0 1161260..1161559 + 99 189184038 - OTT_1131 - hypothetical protein 1132 34.87 +1 1161618..1162073 - 151 189184039 - OTT_1132 - putative conjugative transfer protein TraD 1133 33.58 0 1162368..1162766 + 132 189184040 - OTT_1133 - putative conjugative transfer protein TraA 1134 33.92 0 1162791..1165196 + 801 189184041 - OTT_1134 - putative conjugative transfer protein TraA 1135 33.30 0 1165465..1168137 + 890 189184042 - OTT_1135 - putative conjugative transfer protein TraI 1136 33.23 0 1168122..1169114 + 330 189184043 - OTT_1136 - putative transposase 1137 32.76 0 1169124..1170878 - 584 189184044 - OTT_1137 - putative conjugative transfer protein TraD 1138 28.88 0 1170884..1172029 - 381 189184045 - OTT_1138 - TPR repeat-containing protein 01_07 1139 35.33 +1 1172045..1174396 - 783 189184046 - OTT_1139 - putative conjugative transfer protein TraG 1140 32.29 0 1174479..1175441 - 320 189184047 - OTT_1140 - transposase 1141 37.50 +1 1175618..1175953 - 111 189184048 - OTT_1141 - putative conjugative transfer protein TraG 1142 32.71 0 1175953..1176432 - 159 189184049 - OTT_1142 - putative conjugative transfer protein TraH 1143 36.83 +1 1176627..1177256 - 209 189184050 - OTT_1143 - putative conjugative transfer protein TraH 1144 35.34 +1 1177253..1177951 - 232 189184051 - OTT_1144 - putative conjugative transfer protein TraF 1145 34.91 +1 1177948..1178583 - 211 189184052 - OTT_1145 - putative conjugative transfer protein TraN 1146 31.77 0 1178872..1179639 - 255 189184053 - OTT_1146 - putative conjugative transfer protein TraN 1147 31.46 0 1179636..1179956 - 106 189184054 - OTT_1147 - putative conjugative transfer protein TrbC 1148 37.76 +1 1180041..1180628 - 195 189184055 - OTT_1148 - putative conjugative transfer protein TraU 1149 33.23 0 1180783..1181793 + 336 189184056 - OTT_1149 - ankyrin repeat-containing protein 06_02 1150 35.79 +1 1181692..1183563 - 623 189184057 - OTT_1150 - putative conjugative transfer protein TraC 1151 30.91 0 1183475..1183804 - 109 189184058 - OTT_1151 - hypothetical protein 1152 35.56 +1 1183804..1184073 - 89 189184059 - OTT_1152 - putative conjugative transfer protein TraB 1153 41.67 +2 1184036..1184275 - 79 189184060 - OTT_1153 - putative conjugative transfer protein TraB 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0