version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1010 35.47 +1 1054668..1054901 - 77 189183917 - OTT_1010 - putative conjugative transfer protein TraI 1011 32.64 0 1055260..1055832 - 190 189183918 - OTT_1011 - repeat-containing protein E_01 1012 33.46 0 1055969..1056766 - 265 189183919 - OTT_1012 - putative conjugative transfer protein TraA 1013 33.04 0 1056781..1057455 - 224 189183920 - OTT_1013 - putative conjugative transfer protein TraA 1014 33.56 0 1057463..1058797 - 444 189183921 - OTT_1014 - putative conjugative transfer protein TraA 1015 27.29 -1 1059104..1060426 + 440 189183922 - OTT_1015 - hypothetical protein 1016 36.87 +1 1060588..1060926 + 112 189183923 - OTT_1016 - putative conjugative transfer protein TraD 1017 29.05 0 1061202..1061738 + 178 189183924 secA2 OTT_1017 - preprotein translocase SecA subunit-like protein 1018 31.46 0 1061976..1063418 + 480 189183925 secA2 OTT_1018 - preprotein translocase SecA subunit-like protein 1019 33.65 0 1063942..1065198 + 418 189183926 - OTT_1019 - ankyrin repeat-containing protein 14 1020 29.19 0 1065754..1066380 + 208 189183927 - OTT_1020 - hypothetical protein 1021 28.22 -1 1066533..1067060 + 175 189183928 - OTT_1021 - hypothetical protein 1022 31.60 0 1067066..1067641 - 191 189183929 - OTT_1022 - RelA/SpoT-related protein 1023 30.30 0 1067742..1068500 - 252 189183930 - OTT_1023 - hypothetical protein 1024 28.65 0 1068604..1069350 - 248 189183931 - OTT_1024 - hypothetical protein 1025 28.97 0 1069725..1070114 + 129 189183932 - OTT_1025 - N6 adenine-specific DNA-methyltransferase 1026 27.20 -1 1070149..1070523 + 124 189183933 - OTT_1026 - transposase 1027 31.11 0 1070510..1070644 + 44 189183934 - OTT_1027 - transposase 1028 28.80 0 1070701..1071075 + 124 189183935 - OTT_1028 - transposase 1029 29.98 0 1071062..1071568 + 168 189183936 - OTT_1029 - transposase 1030 30.11 0 1071590..1072054 + 154 189183937 - OTT_1030 - N6 adenine-specific DNA-methyltransferase 1031 28.97 0 1072058..1072561 - 167 189183938 - OTT_1031 - hypothetical protein 1032 31.54 0 1072659..1073159 - 166 189183939 - OTT_1032 - ankyrin repeat-containing protein 03_07 1033 32.16 0 1073521..1074969 - 482 189183940 - OTT_1033 - replicative DNA helicase 1034 28.99 0 1074978..1075322 - 114 189183941 - OTT_1034 - hypothetical protein 1035 29.85 0 1075388..1076536 - 382 189183942 - OTT_1035 - hypothetical protein 1036 31.41 0 1076744..1076899 + 51 189183943 - OTT_1036 - transposase 1037 35.30 +1 1077725..1078996 - 423 189183944 fabF OTT_1037 - 3-oxoacyl-[acyl carrier protein] synthase II 1038 28.17 -1 1079083..1079469 - 128 189183945 acpP OTT_1038 - acyl carrier protein 1039 32.37 0 1079592..1080317 - 241 189183946 fabG OTT_1039 - 3-oxoacyl reductase 1040 34.73 +1 1080311..1081381 - 356 189183947 recA OTT_1040 - RecA protein 1041 28.59 0 1081478..1082278 - 266 189183948 - OTT_1041 - tRNA/rRNA methyltransferase, TrmH family 1042 37.13 +1 1082670..1083854 + 394 189183949 tuf OTT_1042 - elongation factor EF-Tu 1043 35.62 +1 1083897..1084202 + 101 189183950 rpsJ OTT_1043 - 30S ribosomal protein S10 1044 33.33 0 1084186..1084869 + 227 189183951 rplC OTT_1044 - 50S ribosomal protein L3 1045 29.70 0 1084884..1085516 + 210 189183952 rplD OTT_1045 - 50S ribosomal protein L4 1046 27.27 -1 1085513..1085809 + 98 189183953 rplW OTT_1046 - 50S ribosomal protein L23 1047 34.79 +1 1085810..1086631 + 273 189183954 rplB OTT_1047 - 50S ribosomal protein L2 1048 32.26 0 1086655..1086933 + 92 189183955 rpsS OTT_1048 - 30S ribosomal protein S19 1049 27.64 -1 1086935..1087285 + 116 189183956 rplV OTT_1049 - 50S ribosomal protein L22 1050 29.85 0 1087301..1087960 + 219 189183957 rpsC OTT_1050 - 30S ribosomal protein S3 1051 38.93 +2 1087989..1088399 + 136 189183958 rplP OTT_1051 - 50S ribosomal protein L16 1052 20.27 -2 1088392..1088613 + 73 189183959 rpmC OTT_1052 - 50S ribosomal protein L29 1053 32.50 0 1088614..1088853 + 79 189183960 rpsQ OTT_1053 - 30S ribosomal protein S17 1054 32.25 0 1088942..1089310 + 122 189183961 rplN OTT_1054 - 50S ribosomal protein L14 1055 30.19 0 1089312..1089629 + 105 189183962 rplX OTT_1055 - 50S ribosomal protein L24 1056 29.47 0 1089654..1090223 + 189 189183963 rplE OTT_1056 - 50S ribosomal protein L5 1057 32.35 0 1090242..1090547 + 101 189183964 rpsN OTT_1057 - 30S ribosomal protein S14 1058 30.85 0 1090570..1090971 + 133 189183965 rpsH OTT_1058 - 30S ribosomal protein S8 1059 29.96 0 1090999..1091532 + 177 189183966 rplF OTT_1059 - 50S ribosomal protein L6 1060 31.20 0 1091546..1091920 + 124 189183967 rplR OTT_1060 - 50S ribosomal protein L18 1061 35.44 +1 1091941..1092462 + 173 189183968 rpsE OTT_1061 - 30S ribosomal protein S5 1062 24.44 -2 1092462..1092596 + 44 189183969 - OTT_1062 - hypothetical protein 1063 28.86 0 1092695..1093186 + 163 189183970 rplO OTT_1063 - 50S ribosomal protein L15 1064 30.20 0 1093188..1094495 + 435 189183971 secY OTT_1064 - preprotein translocase SecY subunit 1065 27.60 -1 1094492..1095136 + 214 189183972 adk OTT_1065 - adenylate kinase 1066 32.01 0 1095216..1095593 + 125 189183973 rpsM OTT_1066 - 30S ribosomal protein S13 1067 33.33 0 1095603..1095983 + 126 189183974 rpsK OTT_1067 - 30S ribosomal protein S11 1068 30.81 0 1096032..1097060 + 342 189183975 rpoA OTT_1068 - DNA-directed RNA polymerase alpha chain 1069 32.19 0 1097079..1097516 + 145 189183976 rplQ OTT_1069 - 50S ribosomal protein L17 1070 28.21 -1 1097598..1097870 + 90 189183977 rpsT OTT_1070 - 30S ribosomal protein S20 1071 29.11 0 1097935..1099995 + 686 189183978 ptrB OTT_1071 - protease II 1072 30.28 0 1100020..1101231 + 403 189183979 - OTT_1072 - 5-aminolevulinic acid synthase 1073 25.64 -1 1101241..1102293 - 350 189183980 perM OTT_1073 - permease protein PerM 1074 27.30 -1 1102587..1103183 + 198 189183981 pgpA OTT_1074 - phosphatidylglycerophosphatase A 1075 32.73 0 1103243..1103743 + 166 189183982 cinA OTT_1075 - competence-damaged protein CinA 1076 32.56 0 1103791..1104693 + 300 189183983 thyA OTT_1076 - Thy1 protein 1077 27.64 -1 1108251..1108952 + 233 189183984 virB8 OTT_1077 - type IV secretion system protein VirB8 1078 28.08 -1 1108942..1109703 + 253 189183985 trbG OTT_1078 - conjugal transfer protein TrbG precursor 1079 31.54 0 1109959..1110348 - 129 189183986 - OTT_1079 - hypothetical protein 1080 30.59 0 1110451..1111398 + 315 189183987 ftsY OTT_1080 - signal recognition particle receptor FtsY 1081 27.58 -1 1114352..1114855 + 167 189183988 - OTT_1081 - hypothetical protein 1082 29.51 0 1114868..1115782 + 304 189183989 tlyC OTT_1082 - hemolysin C 1083 31.56 0 1115832..1116395 - 187 189183990 ubiX OTT_1083 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1084 28.71 0 1116879..1118348 + 489 189183991 - OTT_1084 - putative response regulator protein 1085 30.28 0 1118707..1119132 - 141 189183992 apaG OTT_1085 - ApaG protein 1086 30.03 0 1120371..1120703 + 110 189183993 - OTT_1086 - putative conjugative transfer protein TraA 1087 32.80 0 1120717..1121472 + 251 189183994 - OTT_1087 - putative conjugative transfer protein TraA 1088 35.45 +1 1121691..1122068 + 125 189183995 - OTT_1088 - putative conjugative transfer protein TraA 1089 27.91 -1 1122006..1122263 - 85 189183996 - OTT_1089 - ankyrin repeat-containing protein 10_03 1090 25.87 -1 1122302..1122703 - 133 189183997 - OTT_1090 - ankyrin repeat-containing protein 10_04 1091 33.90 0 1122738..1122914 + 58 189183998 - OTT_1091 - hypothetical protein 1092 33.54 0 1122923..1123909 - 328 189183999 - OTT_1092 - putative conjugative transfer protein TraD 1093 26.04 -1 1124212..1124595 - 127 189184000 - OTT_1093 - TPR repeat-containing protein 01_04 1094 29.13 0 1124589..1124897 - 102 189184001 - OTT_1094 - TPR repeat-containing protein 01_05 1095 30.63 0 1125046..1125156 - 36 189184002 - OTT_1095 - TPR repeat-containing protein 01_06 1096 25.31 -1 1125575..1125898 - 107 189184003 - OTT_1096 - hypothetical protein 1097 28.22 -1 1127057..1128073 - 338 189184004 ispB OTT_1097 - octaprenyl-diphosphate synthase 1098 25.67 -1 1128093..1129907 - 604 189184005 - OTT_1098 - hypothetical protein 1099 28.80 0 1129907..1131451 - 514 189184006 tlc3 OTT_1099 - ADP,ATP carrier protein homolog 1100 28.11 -1 1131604..1133136 - 510 189184007 tlc4 OTT_1100 - ADP,ATP carrier protein homolog 1101 28.89 0 1133652..1133966 - 104 189184008 - OTT_1101 - transposase 1102 29.07 0 1133915..1134313 - 132 189184009 - OTT_1102 - transposase 1103 35.19 +1 1134631..1134792 - 53 189184010 - OTT_1103 - putative conjugative transfer protein TraD 1104 29.17 0 1134977..1135168 + 63 189184011 - OTT_1104 - transposase 1105 31.84 0 1135310..1135576 + 88 189184012 - OTT_1105 - transposase 1106 31.88 0 1135577..1135783 + 68 189184013 - OTT_1106 - transposase 1107 32.23 0 1136871..1138409 - 512 189184014 aprE OTT_1107 - alkaline protease secretion protein AprE 1108 32.82 0 1138447..1140201 - 584 189184015 aprD OTT_1108 - alkaline protease secretion ATP-binding protein AprD 1109 27.85 -1 1141655..1143169 + 504 189184016 mviN OTT_1109 - virulence factor MviN 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.