version 1.0
Orientia tsutsugamushi str. Ikeda, complete genome - 1..2008987 1967 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 978 28.52 0 1027765..1028055 - 96 189183885 - OTT_0978 - transposase 979 30.33 0 1028515..1030044 + 509 189183886 - OTT_0979 - hypothetical protein 980 31.94 0 1030053..1031489 + 478 189183887 - OTT_0980 - replicative DNA helicase 981 31.57 0 1031903..1032298 + 131 189183888 - OTT_0981 - RelA/SpoT-related protein 982 30.78 0 1032433..1032981 + 182 189183889 - OTT_0982 - ankyrin repeat-containing protein 03_06 983 31.88 0 1033028..1033576 + 182 189183890 - OTT_0983 - hypothetical protein 984 30.00 0 1033580..1034389 - 269 189183891 - OTT_0984 - N6 adenine-specific DNA-methyltransferase 985 28.67 0 1034756..1035034 + 92 189183892 - OTT_0985 - hypothetical protein 986 28.63 0 1035099..1035800 + 233 189183893 - OTT_0986 - hypothetical protein 987 30.50 0 1035929..1036210 + 93 189183894 - OTT_0987 - hypothetical protein 988 31.43 0 1036252..1036725 + 157 189183895 - OTT_0988 - hypothetical protein 989 30.14 0 1036748..1037686 + 312 189183896 - OTT_0989 - hypothetical protein 990 28.89 0 1037705..1038199 + 164 189183897 - OTT_0990 - hypothetical protein 991 31.60 0 1038229..1038633 + 134 189183898 - OTT_0991 - RelA/SpoT-related protein 992 30.77 0 1038673..1038828 + 51 189183899 - OTT_0992 - RelA/SpoT-related protein 993 31.63 0 1038949..1039947 + 332 189183900 - OTT_0993 - hypothetical protein 994 35.53 +1 1040015..1040470 - 151 189183901 - OTT_0994 - putative conjugative transfer protein TraD 995 33.33 0 1040766..1040867 + 33 189183902 - OTT_0995 - putative conjugative transfer protein TraA 996 33.30 0 1040922..1043582 + 886 189183903 - OTT_0996 - putative conjugative transfer protein TraA 997 31.75 0 1043913..1044983 + 356 189183904 - OTT_0997 - putative conjugative transfer protein TraI 998 30.66 0 1045035..1045595 + 186 189183905 - OTT_0998 - putative transposase 999 32.29 0 1045611..1046573 - 320 189183906 - OTT_0999 - transposase 1000 31.29 0 1047155..1047742 + 195 189183907 - OTT_1000 - hypothetical protein 1001 31.42 0 1047995..1048987 - 330 189183908 gpsA OTT_1001 - glycerol-3-phosphate dehydrogenase 1002 31.60 0 1049050..1050321 - 423 189183909 - OTT_1002 - hypothetical protein 1003 28.21 -1 1050531..1050842 + 103 189183910 - OTT_1003 - transposase 1004 31.25 0 1051595..1052170 + 191 189183911 - OTT_1004 - putative integrase 1005 33.78 0 1052195..1052641 + 148 189183912 - OTT_1005 - putative integrase 1006 36.42 +1 1052779..1053102 + 107 189183913 - OTT_1006 - hypothetical protein 1007 31.30 0 1053102..1053494 + 130 189183914 - OTT_1007 - putative conjugative transfer protein TraE 1008 29.44 0 1053905..1054135 + 76 189183915 - OTT_1008 - hypothetical protein 1009 38.36 +2 1054211..1054369 + 52 189183916 - OTT_1009 - putative conjugative transfer protein TraB 1010 35.47 +1 1054668..1054901 - 77 189183917 - OTT_1010 - putative conjugative transfer protein TraI 1011 32.64 0 1055260..1055832 - 190 189183918 - OTT_1011 - repeat-containing protein E_01 1012 33.46 0 1055969..1056766 - 265 189183919 - OTT_1012 - putative conjugative transfer protein TraA 1013 33.04 0 1056781..1057455 - 224 189183920 - OTT_1013 - putative conjugative transfer protein TraA 1014 33.56 0 1057463..1058797 - 444 189183921 - OTT_1014 - putative conjugative transfer protein TraA 1015 27.29 -1 1059104..1060426 + 440 189183922 - OTT_1015 - hypothetical protein 1016 36.87 +1 1060588..1060926 + 112 189183923 - OTT_1016 - putative conjugative transfer protein TraD 1017 29.05 0 1061202..1061738 + 178 189183924 secA2 OTT_1017 - preprotein translocase SecA subunit-like protein 1018 31.46 0 1061976..1063418 + 480 189183925 secA2 OTT_1018 - preprotein translocase SecA subunit-like protein 1019 33.65 0 1063942..1065198 + 418 189183926 - OTT_1019 - ankyrin repeat-containing protein 14 1020 29.19 0 1065754..1066380 + 208 189183927 - OTT_1020 - hypothetical protein 1021 28.22 -1 1066533..1067060 + 175 189183928 - OTT_1021 - hypothetical protein 1022 31.60 0 1067066..1067641 - 191 189183929 - OTT_1022 - RelA/SpoT-related protein 1023 30.30 0 1067742..1068500 - 252 189183930 - OTT_1023 - hypothetical protein 1024 28.65 0 1068604..1069350 - 248 189183931 - OTT_1024 - hypothetical protein 1025 28.97 0 1069725..1070114 + 129 189183932 - OTT_1025 - N6 adenine-specific DNA-methyltransferase 1026 27.20 -1 1070149..1070523 + 124 189183933 - OTT_1026 - transposase 1027 31.11 0 1070510..1070644 + 44 189183934 - OTT_1027 - transposase 1028 28.80 0 1070701..1071075 + 124 189183935 - OTT_1028 - transposase 1029 29.98 0 1071062..1071568 + 168 189183936 - OTT_1029 - transposase 1030 30.11 0 1071590..1072054 + 154 189183937 - OTT_1030 - N6 adenine-specific DNA-methyltransferase 1031 28.97 0 1072058..1072561 - 167 189183938 - OTT_1031 - hypothetical protein 1032 31.54 0 1072659..1073159 - 166 189183939 - OTT_1032 - ankyrin repeat-containing protein 03_07 1033 32.16 0 1073521..1074969 - 482 189183940 - OTT_1033 - replicative DNA helicase 1034 28.99 0 1074978..1075322 - 114 189183941 - OTT_1034 - hypothetical protein 1035 29.85 0 1075388..1076536 - 382 189183942 - OTT_1035 - hypothetical protein 1036 31.41 0 1076744..1076899 + 51 189183943 - OTT_1036 - transposase 1037 35.30 +1 1077725..1078996 - 423 189183944 fabF OTT_1037 - 3-oxoacyl-[acyl carrier protein] synthase II 1038 28.17 -1 1079083..1079469 - 128 189183945 acpP OTT_1038 - acyl carrier protein 1039 32.37 0 1079592..1080317 - 241 189183946 fabG OTT_1039 - 3-oxoacyl reductase 1040 34.73 +1 1080311..1081381 - 356 189183947 recA OTT_1040 - RecA protein 1041 28.59 0 1081478..1082278 - 266 189183948 - OTT_1041 - tRNA/rRNA methyltransferase, TrmH family 1042 37.13 +1 1082670..1083854 + 394 189183949 tuf OTT_1042 - elongation factor EF-Tu 1043 35.62 +1 1083897..1084202 + 101 189183950 rpsJ OTT_1043 - 30S ribosomal protein S10 1044 33.33 0 1084186..1084869 + 227 189183951 rplC OTT_1044 - 50S ribosomal protein L3 1045 29.70 0 1084884..1085516 + 210 189183952 rplD OTT_1045 - 50S ribosomal protein L4 1046 27.27 -1 1085513..1085809 + 98 189183953 rplW OTT_1046 - 50S ribosomal protein L23 1047 34.79 +1 1085810..1086631 + 273 189183954 rplB OTT_1047 - 50S ribosomal protein L2 1048 32.26 0 1086655..1086933 + 92 189183955 rpsS OTT_1048 - 30S ribosomal protein S19 1049 27.64 -1 1086935..1087285 + 116 189183956 rplV OTT_1049 - 50S ribosomal protein L22 1050 29.85 0 1087301..1087960 + 219 189183957 rpsC OTT_1050 - 30S ribosomal protein S3 1051 38.93 +2 1087989..1088399 + 136 189183958 rplP OTT_1051 - 50S ribosomal protein L16 1052 20.27 -2 1088392..1088613 + 73 189183959 rpmC OTT_1052 - 50S ribosomal protein L29 1053 32.50 0 1088614..1088853 + 79 189183960 rpsQ OTT_1053 - 30S ribosomal protein S17 1054 32.25 0 1088942..1089310 + 122 189183961 rplN OTT_1054 - 50S ribosomal protein L14 1055 30.19 0 1089312..1089629 + 105 189183962 rplX OTT_1055 - 50S ribosomal protein L24 1056 29.47 0 1089654..1090223 + 189 189183963 rplE OTT_1056 - 50S ribosomal protein L5 1057 32.35 0 1090242..1090547 + 101 189183964 rpsN OTT_1057 - 30S ribosomal protein S14 1058 30.85 0 1090570..1090971 + 133 189183965 rpsH OTT_1058 - 30S ribosomal protein S8 1059 29.96 0 1090999..1091532 + 177 189183966 rplF OTT_1059 - 50S ribosomal protein L6 1060 31.20 0 1091546..1091920 + 124 189183967 rplR OTT_1060 - 50S ribosomal protein L18 1061 35.44 +1 1091941..1092462 + 173 189183968 rpsE OTT_1061 - 30S ribosomal protein S5 1062 24.44 -2 1092462..1092596 + 44 189183969 - OTT_1062 - hypothetical protein 1063 28.86 0 1092695..1093186 + 163 189183970 rplO OTT_1063 - 50S ribosomal protein L15 1064 30.20 0 1093188..1094495 + 435 189183971 secY OTT_1064 - preprotein translocase SecY subunit 1065 27.60 -1 1094492..1095136 + 214 189183972 adk OTT_1065 - adenylate kinase 1066 32.01 0 1095216..1095593 + 125 189183973 rpsM OTT_1066 - 30S ribosomal protein S13 1067 33.33 0 1095603..1095983 + 126 189183974 rpsK OTT_1067 - 30S ribosomal protein S11 1068 30.81 0 1096032..1097060 + 342 189183975 rpoA OTT_1068 - DNA-directed RNA polymerase alpha chain 1069 32.19 0 1097079..1097516 + 145 189183976 rplQ OTT_1069 - 50S ribosomal protein L17 1070 28.21 -1 1097598..1097870 + 90 189183977 rpsT OTT_1070 - 30S ribosomal protein S20 1071 29.11 0 1097935..1099995 + 686 189183978 ptrB OTT_1071 - protease II 1072 30.28 0 1100020..1101231 + 403 189183979 - OTT_1072 - 5-aminolevulinic acid synthase 1073 25.64 -1 1101241..1102293 - 350 189183980 perM OTT_1073 - permease protein PerM 1074 27.30 -1 1102587..1103183 + 198 189183981 pgpA OTT_1074 - phosphatidylglycerophosphatase A 1075 32.73 0 1103243..1103743 + 166 189183982 cinA OTT_1075 - competence-damaged protein CinA 1076 32.56 0 1103791..1104693 + 300 189183983 thyA OTT_1076 - Thy1 protein 1077 27.64 -1 1108251..1108952 + 233 189183984 virB8 OTT_1077 - type IV secretion system protein VirB8 31.48 MEAN 3.15 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0