version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 937 66.78 0 988797..989651 + 284 87198963 - Saro_0941 - alpha/beta hydrolase 938 68.30 0 989648..990808 + 386 87198964 - Saro_0942 - glycosyl transferase, group 1 939 65.49 0 990938..991699 + 253 87198965 - Saro_0943 - hypothetical protein 940 67.19 0 991721..993067 + 448 87198966 - Saro_0944 - Pyrrolo-quinoline quinone 941 66.67 0 993110..994444 + 444 87198967 - Saro_0945 - isoprenylcysteine carboxyl methyltransferase 942 55.72 -2 994592..994792 + 66 87198968 - Saro_0946 - hypothetical protein 943 62.28 0 994872..995099 + 75 87198969 - Saro_0947 - hypothetical protein 944 63.22 0 995096..995443 - 115 87198970 - Saro_0948 - antibiotic biosynthesis monooxygenase 945 66.38 0 995490..996863 - 457 87198971 - Saro_0949 - glutamate--cysteine ligase 946 67.44 0 996954..997730 - 258 87198972 - Saro_0950 - hypothetical protein 947 68.63 +1 997752..998666 + 304 87198973 ubiA Saro_0951 - prenyltransferase 948 66.31 0 998645..999490 - 281 87198974 - Saro_0952 - N-acetyltransferase 949 64.81 0 999480..999857 - 125 87198975 - Saro_0953 - glyoxalase/bleomycin resistance protein/dioxygenase 950 63.27 0 1000009..1000449 + 146 87198976 - Saro_0954 - MerR family transcriptional regulator 951 70.44 +1 1000446..1003889 - 1147 87198977 - Saro_0955 - chromosome segregation protein SMC 952 65.07 0 1003928..1004677 - 249 87198978 - Saro_0956 - protein-disulfide isomerase 953 59.10 -1 1004992..1005348 + 118 87198979 - Saro_0957 - excinuclease ABC subunit C 954 65.69 0 1005560..1006276 - 238 87198980 - Saro_0958 - protein-disulfide isomerase 955 66.84 0 1006273..1006842 - 189 87198981 - Saro_0959 - hypothetical protein 956 69.44 +1 1006872..1007951 + 359 87198982 - Saro_0960 - A/G-specific DNA-adenine glycosylase 957 69.14 +1 1007956..1009251 + 431 87198983 - Saro_0961 - twin-arginine translocation pathway signal 958 68.82 +1 1009251..1010132 + 293 87198984 - Saro_0962 - NUDIX hydrolase 959 68.69 +1 1010129..1010821 + 230 87198985 - Saro_0963 - DSBA oxidoreductase 960 64.95 0 1010832..1011239 - 135 87198986 - Saro_0964 - hypothetical protein 961 65.63 0 1011254..1012699 - 481 87198987 - Saro_0965 - magnesium transporter 962 64.47 0 1012810..1013265 + 151 87198988 - Saro_0966 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 963 68.77 +1 1013326..1014654 - 442 87198989 gltX Saro_0967 - glutamyl-tRNA synthetase 964 70.34 +1 1014694..1015128 - 144 87198990 - Saro_0968 - hypothetical protein 965 63.86 0 1015181..1015429 - 82 87198991 - Saro_0969 - hypothetical protein 966 65.33 0 1015433..1017154 - 573 87198992 nadE Saro_0970 - NAD synthetase 967 65.92 0 1017201..1018136 + 311 87198993 - Saro_0971 - ribose-phosphate pyrophosphokinase 968 62.17 0 1018189..1018677 - 162 87198994 - Saro_0972 - hypothetical protein 969 64.04 0 1018702..1019349 + 215 87198995 - Saro_0973 - TetR family transcriptional regulator 970 66.56 0 1019333..1020274 - 313 87198996 - Saro_0974 - AraC family transcriptional regulator 971 67.18 0 1020437..1021216 + 259 87198997 - Saro_0975 - inositol monophosphatase 972 66.22 0 1021224..1021673 + 149 87198998 - Saro_0976 - hypothetical protein 973 68.91 +1 1021670..1022071 - 133 87198999 - Saro_0977 - hypothetical protein 974 64.40 0 1022068..1022949 - 293 87199000 - Saro_0978 - LysR family transcriptional regulator 975 66.24 0 1022952..1023893 - 313 87199001 - Saro_0979 - CBS 976 66.27 0 1023914..1024417 - 167 87199002 - Saro_0980 - hypothetical protein 977 65.62 0 1024414..1025460 - 348 87199003 - Saro_0981 - PhoH-like protein 978 66.44 0 1025606..1026937 - 443 87199004 - Saro_0982 - tRNA-i(6)A37 modification enzyme MiaB 979 65.37 0 1026972..1027745 - 257 87199005 - Saro_0983 - lyso-ornithine lipid acyltransferase 980 65.48 0 1027729..1028151 - 140 87199006 - Saro_0984 - ferric uptake regulator family protein 981 60.50 -1 1028255..1028692 - 145 87199007 - Saro_0985 - MucR family transcriptional regulator 982 56.54 -2 1028861..1029334 - 157 87199008 - Saro_0986 - GCN5-related N-acetyltransferase 983 67.31 0 1029346..1029966 - 206 87199009 - Saro_0987 - peptidase M22, glycoprotease 984 64.63 0 1029983..1030570 - 195 87199010 - Saro_0988 - nitrogen-fixing NifU-like 985 68.79 +1 1030696..1031259 + 187 87199011 - Saro_0989 - peptidylprolyl isomerase, FKBP-type 986 66.32 0 1031323..1034208 + 961 87199012 - Saro_0990 - peptidase M16-like 987 65.43 0 1034325..1035698 + 457 87199013 - Saro_0991 - 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 988 68.86 +1 1035736..1036329 - 197 87199014 - Saro_0992 - TetR family transcriptional regulator 989 67.35 0 1036419..1036859 - 146 87199015 - Saro_0993 - hypothetical protein 990 64.62 0 1036891..1037967 - 358 87199016 - Saro_0994 - aminoglycoside phosphotransferase 991 66.94 0 1037964..1039052 - 362 87199017 - Saro_0995 - alcohol dehydrogenase, zinc-containing 992 66.13 0 1039072..1040364 - 430 87199018 - Saro_0996 - acyl-CoA dehydrogenase-like 993 67.44 0 1040458..1041885 - 475 87199019 - Saro_0997 - Na+/melibiose symporter and related transporters-like 994 66.67 0 1041882..1042730 - 282 87199020 - Saro_0998 - short-chain dehydrogenase/reductase SDR 995 64.60 0 1042925..1044085 + 386 87199021 - Saro_0999 - acyl-CoA dehydrogenase-like 996 65.00 0 1044089..1045228 + 379 87199022 - Saro_1000 - acyl-CoA dehydrogenase-like 997 63.56 0 1045340..1046143 + 267 87199023 - Saro_1001 - short-chain dehydrogenase/reductase SDR 998 68.24 0 1046149..1047036 + 295 87199024 - Saro_1002 - gluconolactonase 999 65.77 0 1047044..1047709 - 221 87199025 - Saro_1003 - guanylate kinase 1000 65.90 0 1047777..1048169 - 130 87199026 - Saro_1004 - hypothetical protein 1001 63.47 0 1048204..1048704 - 166 87199027 - Saro_1005 - hypothetical protein 1002 64.48 0 1048789..1049382 + 197 87199028 - Saro_1006 - imidazoleglycerol-phosphate dehydratase 1003 67.62 0 1049375..1050004 + 209 87199029 hisH Saro_1007 - imidazole glycerol phosphate synthase subunit HisH 1004 64.39 0 1050070..1051209 + 379 87199030 - Saro_1008 - hypothetical protein 1005 65.01 0 1051232..1051957 + 241 87199031 - Saro_1009 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1006 68.09 0 1051962..1052735 + 257 87199032 - Saro_1010 - imidazole glycerol phosphate synthase subunit HisF 1007 66.36 0 1053185..1053508 + 107 87199033 - Saro_1011 - phosphoribosyl-ATP pyrophosphatase 1008 64.02 0 1053510..1053887 + 125 87199034 - Saro_1012 - histidine triad (HIT) protein 1009 66.45 0 1053963..1054427 + 154 87199035 - Saro_1013 - 4-hydroxybenzoyl-CoA thioesterase 1010 66.10 0 1054424..1055125 + 233 87199036 - Saro_1014 - MotA/TolQ/ExbB proton channel 1011 68.43 0 1055129..1055581 + 150 87199037 - Saro_1015 - biopolymer transport protein ExbD/TolR 1012 70.41 +1 1055592..1056473 + 293 87199038 - Saro_1016 - hypothetical protein 1013 65.95 0 1056470..1057855 + 461 87199039 tolB Saro_1017 - translocation protein TolB 1014 67.64 0 1057969..1058481 + 170 87199040 - Saro_1018 - OmpA/MotB 1015 66.67 0 1058602..1059135 + 177 87199041 - Saro_1019 - heat shock protein DnaJ-like 1016 62.63 0 1059132..1060022 + 296 87199042 - Saro_1020 - phytanoyl-CoA dioxygenase 1017 68.00 0 1059940..1061142 - 400 87199043 - Saro_1021 - polynucleotide adenylyltransferase region 1018 66.67 0 1061135..1061749 - 204 87199044 - Saro_1022 - NUDIX hydrolase 1019 67.54 0 1061746..1062315 - 189 87199045 - Saro_1023 - hypothetical protein 1020 66.48 0 1062338..1062874 - 178 87199046 - Saro_1024 - acetyltransferase-like 1021 65.40 0 1063077..1064498 + 473 87199047 - Saro_1025 - cytochrome bd ubiquinol oxidase, subunit I 1022 66.67 0 1064498..1065496 + 332 87199048 - Saro_1026 - cytochrome d ubiquinol oxidase, subunit II 1023 66.05 0 1065483..1065644 + 53 87199049 - Saro_1027 - hypothetical protein 1024 67.53 0 1065625..1067019 - 464 87199050 - Saro_1028 - XRE family transcriptional regulator 1025 63.35 0 1067166..1068761 + 531 87199051 - Saro_1029 - isocitrate lyase 1026 60.38 -1 1068826..1068984 + 52 87199052 - Saro_1030 - hypothetical protein 1027 65.67 0 1069183..1071492 + 769 87199053 - Saro_1031 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 1028 67.99 0 1071489..1072166 - 225 87199054 - Saro_1032 - phosphoribosylformylglycinamidine synthase I 1029 62.82 0 1072181..1072414 - 77 87199055 - Saro_1033 - phosphoribosylformylglycinamidine synthetase PurS 1030 65.85 0 1072837..1073451 + 204 87199056 - Saro_1034 - TetR family transcriptional regulator 1031 70.46 +1 1073448..1074422 + 324 87199057 - Saro_1035 - secretion protein HlyD 1032 69.20 +1 1074419..1075405 + 328 87199058 - Saro_1036 - ABC transporter related 1033 65.97 0 1075402..1076550 + 382 87199059 - Saro_1037 - hypothetical protein 1034 68.67 +1 1076575..1079421 - 948 87199060 - Saro_1038 - peptidase M16-like 1035 60.00 -1 1079480..1079674 - 64 87199061 - Saro_1039 - hypothetical protein 1036 54.79 -2 1079674..1079976 - 100 87199062 - Saro_1040 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.