version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 872 65.19 0 931664..932206 - 180 87198898 - Saro_0876 - NUDIX hydrolase 873 66.81 0 932203..932898 - 231 87198899 - Saro_0877 - hypothetical protein 874 69.52 +1 932898..933737 - 279 87198900 - Saro_0878 - hypothetical protein 875 66.51 0 933739..934365 - 208 87198901 - Saro_0879 - hypothetical protein 876 62.61 0 934521..934988 + 155 87198902 - Saro_0880 - large conductance mechanosensitive channel protein 877 66.67 0 935440..935685 - 81 87198903 - Saro_0881 - hypothetical protein 878 70.22 +1 935831..937096 - 421 87198904 - Saro_0882 - succinylarginine dihydrolase 879 66.47 0 937249..938286 - 345 87198905 - Saro_0883 - arginine succinyltransferase 880 69.89 +1 938283..939491 - 402 87198906 - Saro_0884 - hypothetical protein 881 66.43 0 939719..941863 + 714 87198907 - Saro_0885 - malate synthase G 882 67.03 0 941886..942707 - 273 87198908 ksgA Saro_0886 - dimethyladenosine transferase 883 71.13 +1 942704..943711 - 335 87198909 - Saro_0887 - 4-hydroxythreonine-4-phosphate dehydrogenase 884 66.52 0 943788..945158 - 456 87198910 - Saro_0888 - PpiC-type peptidyl-prolyl cis-trans isomerase 885 67.68 0 945287..947557 - 756 87198911 - Saro_0889 - organic solvent tolerance protein 886 68.52 +1 947659..949116 + 485 87198912 - Saro_0890 - leucyl aminopeptidase 887 62.75 0 949181..949333 + 50 87198913 - Saro_0891 - hypothetical protein 888 71.06 +1 949333..949764 + 143 87198914 - Saro_0892 - DNA polymerase III chi subunit, HolC 889 63.33 0 949958..950257 - 99 87198915 - Saro_0893 - excinuclease ABC subunit C 890 62.41 0 950467..950889 + 140 87198916 - Saro_0894 - nucleoside diphosphate kinase 891 64.46 0 951145..953454 + 769 87198917 - Saro_0895 - TonB-dependent receptor 892 60.71 -1 953540..953791 + 83 87198918 - Saro_0896 - hypothetical protein 893 68.96 +1 953832..954965 - 377 87198919 - Saro_0897 - hypothetical protein 894 67.01 0 954970..955557 - 195 87198920 - Saro_0898 - phosphoribosylglycinamide formyltransferase 895 66.49 0 955550..956656 - 368 87198921 - Saro_0899 - phosphoribosylaminoimidazole synthetase 896 69.58 +1 956793..958061 + 422 87198922 - Saro_0900 - hypothetical protein 897 66.67 0 958095..958709 + 204 87198923 - Saro_0901 - ATPase 898 67.36 0 958737..959459 + 240 87198924 - Saro_0902 - Serine O-acetyltransferase 899 68.86 +1 959555..959827 + 90 87198925 - Saro_0903 - hypothetical protein 900 67.63 0 959841..960254 - 137 87198926 - Saro_0904 - phenylacetic acid degradation-related protein 901 66.07 0 960251..960754 - 167 87198927 - Saro_0905 - phenylacetic acid degradation-related protein 902 68.16 0 960808..961275 - 155 87198928 - Saro_0906 - Holliday junction resolvase YqgF 903 70.25 +1 961272..962387 - 371 87198929 - Saro_0907 - hypothetical protein 904 67.13 0 962391..963458 - 355 87198930 - Saro_0908 - hypothetical protein 905 67.33 0 963464..964369 - 301 87198931 - Saro_0909 - signal peptidase I 906 67.65 0 964366..964773 - 135 87198932 acpS Saro_0910 - 4'-phosphopantetheinyl transferase 907 70.16 +1 964782..965525 - 247 87198933 - Saro_0911 - pyridoxal phosphate biosynthetic protein PdxJ 908 68.21 0 965522..966106 - 194 87198934 pyrE Saro_0912 - orotate phosphoribosyltransferase 909 67.52 0 966385..967434 + 349 87198935 - Saro_0913 - cytochrome-c oxidase 910 62.34 0 967462..969150 + 562 87198936 - Saro_0914 - cytochrome-c oxidase 911 66.23 0 969351..970265 + 304 87198937 - Saro_0915 - protoheme IX farnesyltransferase 912 64.91 0 970267..970437 + 56 87198938 - Saro_0916 - hypothetical protein 913 64.29 0 970439..971068 + 209 87198939 - Saro_0917 - cytochrome C oxidase assembly protein 914 61.92 -1 971151..971972 + 273 87198940 - Saro_0918 - cytochrome c oxidase, subunit III 915 66.13 0 971972..972343 + 123 87198941 - Saro_0919 - hypothetical protein 916 67.18 0 972343..972927 + 194 87198942 - Saro_0920 - hypothetical protein 917 66.95 0 973079..974500 + 473 87198943 - Saro_0921 - threonine synthase 918 67.01 0 974493..975377 + 294 87198944 - Saro_0922 - SAM-dependent methyltransferase 919 59.29 -1 975413..975805 + 130 87198945 - Saro_0923 - dihydroneopterin aldolase-like protein 920 67.33 0 975805..976563 + 252 87198946 - Saro_0924 - short-chain dehydrogenase/reductase SDR 921 68.53 +1 976560..977579 + 339 87198947 - Saro_0925 - GTP cyclohydrolase subunit MoaA 922 66.67 0 977579..977815 + 78 87198948 - Saro_0926 - thiamineS 923 67.79 0 977817..978263 + 148 87198949 - Saro_0927 - molybdopterin synthase subunit MoaE 924 70.00 +1 978281..978910 - 209 87198950 - Saro_0928 - hypothetical protein 925 63.30 0 979072..979368 + 98 87198951 rplU Saro_0929 - 50S ribosomal protein L21 926 65.93 0 979395..979664 + 89 87198952 rpmA Saro_0930 - 50S ribosomal protein L27 927 71.05 +1 979898..980467 + 189 87198953 - Saro_0931 - GCN5-related N-acetyltransferase 928 64.75 0 980516..981400 - 294 87198954 - Saro_0932 - FF domain-containing protein 929 66.16 0 981438..982028 + 196 87198955 - Saro_0933 - TetR family transcriptional regulator 930 66.53 0 982012..982758 - 248 87198956 - Saro_0934 - aminomethyl transferase 931 65.71 0 982797..983837 + 346 87198957 - Saro_0935 - dihydroorotase 932 66.89 0 983841..984728 - 295 87198958 - Saro_0936 - rarD protein 933 71.31 +1 984937..985431 + 164 87198959 - Saro_0937 - 17 kDa surface antigen 934 69.30 +1 985557..985784 + 75 87198960 - Saro_0938 - hypothetical protein 935 67.51 0 985781..987196 - 471 87198961 - Saro_0939 - succinylglutamic semialdehyde dehydrogenase 936 67.87 0 987315..988724 - 469 87198962 - Saro_0940 - hypothetical protein 937 66.78 0 988797..989651 + 284 87198963 - Saro_0941 - alpha/beta hydrolase 938 68.30 0 989648..990808 + 386 87198964 - Saro_0942 - glycosyl transferase, group 1 939 65.49 0 990938..991699 + 253 87198965 - Saro_0943 - hypothetical protein 940 67.19 0 991721..993067 + 448 87198966 - Saro_0944 - Pyrrolo-quinoline quinone 941 66.67 0 993110..994444 + 444 87198967 - Saro_0945 - isoprenylcysteine carboxyl methyltransferase 942 55.72 -2 994592..994792 + 66 87198968 - Saro_0946 - hypothetical protein 943 62.28 0 994872..995099 + 75 87198969 - Saro_0947 - hypothetical protein 944 63.22 0 995096..995443 - 115 87198970 - Saro_0948 - antibiotic biosynthesis monooxygenase 945 66.38 0 995490..996863 - 457 87198971 - Saro_0949 - glutamate--cysteine ligase 946 67.44 0 996954..997730 - 258 87198972 - Saro_0950 - hypothetical protein 947 68.63 +1 997752..998666 + 304 87198973 ubiA Saro_0951 - prenyltransferase 948 66.31 0 998645..999490 - 281 87198974 - Saro_0952 - N-acetyltransferase 949 64.81 0 999480..999857 - 125 87198975 - Saro_0953 - glyoxalase/bleomycin resistance protein/dioxygenase 950 63.27 0 1000009..1000449 + 146 87198976 - Saro_0954 - MerR family transcriptional regulator 951 70.44 +1 1000446..1003889 - 1147 87198977 - Saro_0955 - chromosome segregation protein SMC 952 65.07 0 1003928..1004677 - 249 87198978 - Saro_0956 - protein-disulfide isomerase 953 59.10 -1 1004992..1005348 + 118 87198979 - Saro_0957 - excinuclease ABC subunit C 954 65.69 0 1005560..1006276 - 238 87198980 - Saro_0958 - protein-disulfide isomerase 955 66.84 0 1006273..1006842 - 189 87198981 - Saro_0959 - hypothetical protein 956 69.44 +1 1006872..1007951 + 359 87198982 - Saro_0960 - A/G-specific DNA-adenine glycosylase 957 69.14 +1 1007956..1009251 + 431 87198983 - Saro_0961 - twin-arginine translocation pathway signal 958 68.82 +1 1009251..1010132 + 293 87198984 - Saro_0962 - NUDIX hydrolase 959 68.69 +1 1010129..1010821 + 230 87198985 - Saro_0963 - DSBA oxidoreductase 960 64.95 0 1010832..1011239 - 135 87198986 - Saro_0964 - hypothetical protein 961 65.63 0 1011254..1012699 - 481 87198987 - Saro_0965 - magnesium transporter 962 64.47 0 1012810..1013265 + 151 87198988 - Saro_0966 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 963 68.77 +1 1013326..1014654 - 442 87198989 gltX Saro_0967 - glutamyl-tRNA synthetase 964 70.34 +1 1014694..1015128 - 144 87198990 - Saro_0968 - hypothetical protein 965 63.86 0 1015181..1015429 - 82 87198991 - Saro_0969 - hypothetical protein 966 65.33 0 1015433..1017154 - 573 87198992 nadE Saro_0970 - NAD synthetase 967 65.92 0 1017201..1018136 + 311 87198993 - Saro_0971 - ribose-phosphate pyrophosphokinase 968 62.17 0 1018189..1018677 - 162 87198994 - Saro_0972 - hypothetical protein 969 64.04 0 1018702..1019349 + 215 87198995 - Saro_0973 - TetR family transcriptional regulator 970 66.56 0 1019333..1020274 - 313 87198996 - Saro_0974 - AraC family transcriptional regulator 971 67.18 0 1020437..1021216 + 259 87198997 - Saro_0975 - inositol monophosphatase 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.