version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 548 65.06 0 600682..602304 - 540 87198574 guaA Saro_0550 - bifunctional GMP synthase/glutamine amidotransferase protein 549 68.79 +1 602665..603510 + 281 87198575 - Saro_0551 - glutamyl-tRNA synthetase, class Ic 550 58.87 -2 603507..603737 + 76 87198576 - Saro_0552 - hypothetical protein 551 67.56 0 603757..604317 + 186 87198577 - Saro_0553 - ATP:cob(I)alamin adenosyltransferase 552 63.23 0 604391..605263 + 290 87198578 - Saro_0554 - 3-hydroxyacyl-CoA dehydrogenase 553 70.25 +1 605322..605684 + 120 87198579 - Saro_0555 - hypothetical protein 554 68.97 +1 605947..606336 - 129 87198580 - Saro_0556 - hypothetical protein 555 68.06 0 606585..607016 + 143 87198581 - Saro_0557 - nuclease (SNase-like) 556 65.09 0 607023..607658 - 211 87198582 - Saro_0558 - TetR family transcriptional regulator 557 66.95 0 607830..609581 + 583 87198583 - Saro_0559 - 5'-nucleotidase 558 68.55 +1 609600..610397 - 265 87198584 - Saro_0560 - hypothetical protein 559 64.54 0 610390..611001 - 203 87198585 - Saro_0561 - phospholipid/glycerol acyltransferase 560 63.72 0 611046..611723 - 225 87198586 - Saro_0562 - hypothetical protein 561 65.99 0 611833..612276 + 147 87198587 - Saro_0563 - hypothetical protein 562 68.42 0 612277..612960 - 227 87198588 - Saro_0564 - glutathione S-transferase-like 563 66.67 0 612965..613513 - 182 87198589 - Saro_0565 - glutathione peroxidase 564 64.09 0 613531..614190 - 219 87198590 - Saro_0566 - butyryl-CoA:acetate CoA transferase 565 72.13 +2 614213..615109 - 298 87198591 - Saro_0567 - hypothetical protein 566 64.28 0 615106..615816 - 236 87198592 - Saro_0568 - 3-oxoacid CoA-transferase, subunit A 567 67.35 0 615911..616783 + 290 87198593 - Saro_0569 - LysR family transcriptional regulator 568 67.29 0 616832..617476 - 214 87198594 - Saro_0570 - epoxide hydrolase domain-containing phosphatase 569 66.79 0 617619..618398 + 259 87198595 - Saro_0571 - hypothetical protein 570 70.44 +1 618437..618913 + 158 87198596 - Saro_0572 - membrane protein-like 571 68.35 0 619329..621647 + 772 87198597 - Saro_0573 - AAA family ATPase, CDC48 subfamily protein 572 68.88 +1 621723..623030 - 435 87198598 - Saro_0574 - signal transduction histidine kinase 573 72.59 +2 623203..623337 + 44 87198599 - Saro_0575 - 50S ribosomal protein L34P 574 68.30 0 623374..623862 + 162 87198600 - Saro_0576 - ribonuclease P protein component 575 65.24 0 623859..624068 + 69 87198601 - Saro_0577 - hypothetical protein 576 63.95 0 624133..625935 + 600 87198602 - Saro_0578 - putative inner membrane protein translocase component YidC 577 65.60 0 625932..626585 + 217 87198603 - Saro_0579 - GTPase EngB 578 66.22 0 626906..627580 + 224 87198604 - Saro_0580 - glutathione S-transferase-like 579 68.44 0 627580..628707 + 375 87198605 - Saro_0581 - succinyl-diaminopimelate desuccinylase 580 74.52 +2 628691..629263 - 190 87198606 - Saro_0582 - Smr protein/MutS2 581 71.24 +1 629263..630486 - 407 87198607 - Saro_0583 - MltA 582 67.20 0 630495..631238 - 247 87198608 - Saro_0584 - import inner membrane translocase, subunit Tim44 583 62.14 0 631271..631513 + 80 87198609 - Saro_0585 - hypothetical protein 584 64.76 0 631524..631994 + 156 87198610 - Saro_0586 - protein translocase subunit secB 585 67.81 0 632025..633596 + 523 87198611 - Saro_0587 - integral membrane protein MviN 586 65.78 0 633608..634627 + 339 87198612 - Saro_0588 - tryptophanyl-tRNA synthetase 587 63.81 0 634798..635496 + 232 87198613 - Saro_0589 - hypothetical protein 588 68.78 +1 635565..636038 - 157 87198614 - Saro_0590 - deoxyuridine 5'-triphosphate nucleotidohydrolase 589 69.19 +1 636019..637206 - 395 87198615 - Saro_0591 - phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase 590 67.92 0 637311..637709 + 132 87198616 - Saro_0592 - hypothetical protein 591 65.39 0 637714..638733 - 339 87198617 - Saro_0593 - acyltransferase 3 592 68.27 0 638968..640527 - 519 87198618 - Saro_0594 - 2-octaprenylphenol hydroxylase 593 65.18 0 640532..641269 - 245 87198619 - Saro_0595 - demethylmenaquinone methyltransferase / 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase 594 67.53 0 641330..642142 + 270 87198620 - Saro_0596 - formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase 595 65.41 0 642174..643286 - 370 87198621 - Saro_0597 - 4-hydroxyphenylpyruvate dioxygenase 596 65.89 0 643385..643897 + 170 87198622 - Saro_0598 - AsnC family transcriptional regulator 597 66.99 0 644032..644970 + 312 87198623 - Saro_0599 - LysR family transcriptional regulator 598 62.21 0 645059..645979 + 306 87198624 - Saro_0600 - sterol desaturase-like 599 68.95 +1 645976..647553 + 525 87198625 - Saro_0601 - sulfotransferase 600 66.67 0 647570..647929 + 119 87198626 - Saro_0602 - hypothetical protein 601 66.10 0 648031..648384 + 117 87198627 - Saro_0603 - hypothetical protein 602 69.35 +1 648439..649371 - 310 87198628 - Saro_0604 - hypothetical protein 603 69.77 +1 649374..651143 - 589 87198629 - Saro_0605 - amidase 604 67.56 0 651140..654733 - 1197 87198630 - Saro_0606 - allophanate hydrolase subunit 2 605 64.15 0 654730..655365 - 211 87198631 - Saro_0607 - hypothetical protein 606 68.85 +1 655382..656206 - 274 87198632 - Saro_0608 - hypothetical protein 607 67.30 0 656203..656679 - 158 87198633 - Saro_0609 - CopG family transcriptional regulator 608 69.64 +1 656681..657487 - 268 87198634 - Saro_0610 - ABC transporter related 609 66.91 0 657484..658299 - 271 87198635 - Saro_0611 - binding-protein-dependent transport systems inner membrane component 610 64.08 0 658339..659421 - 360 87198636 - Saro_0612 - ABC transporter, periplasmic substrate-binding protein 611 62.55 0 660041..662467 + 808 87198637 - Saro_0613 - TonB-dependent receptor 612 66.88 0 662553..663497 + 314 87198638 - Saro_0614 - beta-lactamase-like 613 61.14 -1 663645..664640 + 331 87198639 - Saro_0615 - sterol desaturase-like 614 64.40 0 664669..665286 + 205 87198640 - Saro_0616 - hypothetical protein 615 64.06 0 665462..666613 - 383 87198641 - Saro_0617 - phage integrase 616 61.71 -1 666617..666838 - 73 87198642 - Saro_0618 - hypothetical protein 617 66.36 0 666842..667162 - 106 87198643 - Saro_0619 - hypothetical protein 618 63.93 0 667159..667779 - 206 87198644 - Saro_0620 - MT-A70 619 59.20 -1 667779..668300 - 173 87198645 - Saro_0621 - hypothetical protein 620 63.76 0 668297..668983 - 228 87198646 - Saro_0622 - hypothetical protein 621 60.85 -1 668987..669502 - 171 87198647 - Saro_0623 - hypothetical protein 622 62.26 0 669506..669823 - 105 87198648 - Saro_0624 - GP46 623 63.92 0 669827..671284 - 485 87198649 - Saro_0625 - ParB-like nuclease 624 67.23 0 671305..672378 - 357 87198650 - Saro_0626 - hypothetical protein 625 66.11 0 672375..672731 - 118 87198651 - Saro_0627 - hypothetical protein 626 65.04 0 672976..673221 - 81 87198652 - Saro_0628 - hypothetical protein 627 69.54 +1 673218..673670 - 150 87198653 - Saro_0629 - hypothetical protein 628 60.78 -1 673769..674125 + 118 87198654 - Saro_0630 - hypothetical protein 629 65.81 0 674200..674433 - 77 87198655 - Saro_0631 - hypothetical protein 630 54.95 -2 674523..675179 - 218 87198656 - Saro_0632 - hypothetical protein 631 56.78 -2 675176..675802 - 208 87198657 - Saro_0633 - putative phage repressor 632 60.63 -1 675882..676229 - 115 87198658 - Saro_0634 - hypothetical protein 633 57.58 -2 676226..676456 - 76 87198659 - Saro_0635 - hypothetical protein 634 65.38 0 676570..677037 + 155 87198660 - Saro_0636 - hypothetical protein 635 68.08 0 677034..677600 + 188 87198661 - Saro_0637 - hypothetical protein 636 65.28 0 677597..677956 + 119 87198662 - Saro_0638 - hypothetical protein 637 65.14 0 677953..679200 + 415 87198663 - Saro_0639 - DNA polymerase III beta subunit family protein 638 67.17 0 679217..679414 + 65 87198664 - Saro_0640 - hypothetical protein 639 65.74 0 679419..681137 + 572 87198665 - Saro_0641 - DNA primase 640 62.42 0 681134..682756 + 540 87198666 - Saro_0642 - Phage or plasmid primase P4-like 641 65.40 0 683070..683543 + 157 87198667 - Saro_0643 - hypothetical protein 642 66.67 0 683751..684059 + 102 87198668 - Saro_0644 - HNH endonuclease 643 61.43 -1 684152..684628 + 158 87198669 - Saro_0645 - hypothetical protein 644 62.18 0 684636..686372 + 578 87198670 - Saro_0646 - phage terminase 645 61.92 -1 686369..687673 + 434 87198671 - Saro_0647 - Phage portal protein, HK97 646 61.93 -1 687663..688358 + 231 87198672 - Saro_0648 - prohead peptidase 647 62.37 0 688371..689768 + 465 87198673 - Saro_0649 - Phage major capsid protein, HK97 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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