version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 502 69.05 +1 545339..546724 + 461 87198528 - Saro_0503 - ribonuclease II 503 58.27 -2 547191..547607 + 138 87198529 - Saro_0504 - Excalibur 504 62.53 0 548331..548717 + 128 87198530 - Saro_0505 - hypothetical protein 505 62.31 0 548866..549255 - 129 87198531 - Saro_0506 - IS4 family transposase 506 62.93 0 549276..549623 - 115 87198532 - Saro_0507 - IS5 family transposase 507 59.46 -1 550240..550572 - 110 87198533 - Saro_0509 - ferredoxin 508 62.15 0 550605..552242 - 545 87198534 - Saro_0510 - cyclohexanone monooxygenase 509 66.15 0 552466..553236 - 256 87198535 - Saro_0511 - enoyl-CoA hydratase/isomerase 510 63.05 0 553249..553995 - 248 87198536 - Saro_0512 - short-chain dehydrogenase/reductase SDR 511 65.19 0 554310..555392 + 360 87198537 - Saro_0513 - alcohol dehydrogenase, zinc-containing 512 62.40 0 555434..556699 + 421 87198538 - Saro_0514 - cytochrome P450 513 62.73 0 556696..557178 + 160 87198539 - Saro_0515 - flavin reductase-like, FMN-binding 514 61.90 -1 557175..557762 - 195 87198540 - Saro_0516 - TetR family transcriptional regulator 515 63.03 0 557813..558748 - 311 87198541 - Saro_0517 - gluconolactonase 516 63.58 0 558851..559693 - 280 87198542 - Saro_0518 - enoyl-CoA hydratase/isomerase 517 62.65 0 559882..561576 + 564 87198543 - Saro_0519 - AMP-dependent synthetase and ligase 518 63.18 0 561623..562768 + 381 87198544 - Saro_0520 - GTP cyclohydrolase II 519 61.56 -1 562789..563454 - 221 87198545 - Saro_0521 - TetR family transcriptional regulator 520 60.27 -1 563635..564759 + 374 87198546 - Saro_0522 - luciferase-like 521 60.90 -1 564837..567248 + 803 87198547 - Saro_0523 - TonB-dependent receptor 522 59.20 -1 567592..567765 - 57 87198548 - Saro_0524 - hypothetical protein 523 57.69 -2 567941..568564 - 207 87198549 - Saro_0525 - hypothetical protein 524 58.03 -2 568674..570248 + 524 87198550 - Saro_0526 - recombinase 525 58.78 -2 570248..571147 + 299 87198551 - Saro_0527 - ParB family protein 526 56.67 -2 571140..572099 + 319 87198552 - Saro_0528 - RepB plasmid partition 527 56.51 -2 572780..573094 - 104 87198553 - Saro_0529 - hypothetical protein 528 63.18 0 573909..575255 + 448 87198554 - Saro_0530 - hypothetical protein 529 65.01 0 575338..576366 - 342 87198555 - Saro_0531 - acyltransferase 3 530 62.12 0 576491..577765 - 424 87198556 - Saro_0532 - TetR family transcriptional regulator 531 64.20 0 577801..580191 - 796 87198557 - Saro_0533 - sulfatase 532 65.61 0 580304..582577 + 757 87198558 - Saro_0534 - sulfatase 533 63.62 0 582643..585204 + 853 87198559 - Saro_0535 - TonB-dependent receptor 534 63.50 0 585343..586290 + 315 87198560 - Saro_0536 - hypothetical protein 535 64.40 0 586351..587277 - 308 87198561 - Saro_0537 - LysR family transcriptional regulator 536 63.52 0 587562..588896 + 444 87198562 - Saro_0538 - Rieske (2Fe-2S) protein 537 59.47 -1 588893..589378 + 161 87198563 - Saro_0539 - 2-chlorobenzoate 1,2-dioxygenase 538 67.30 0 589371..590162 + 263 87198564 benD Saro_0540 - 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 539 66.12 0 590232..591146 + 304 87198565 - Saro_0541 - LysR family transcriptional regulator 540 64.92 0 591233..592552 + 439 87198566 - Saro_0542 - glycoside hydrolase family protein 541 66.28 0 592634..593659 + 341 87198567 - Saro_0543 - galactose-1-phosphate uridylyltransferase 542 69.03 +1 593656..594798 + 380 87198568 - Saro_0544 - galactokinase 543 64.49 0 594815..597991 - 1058 87198569 - Saro_0545 - Outer membrane autotransporter barrel protein 544 65.43 0 598289..598936 + 215 87198570 - Saro_0546 - RNA polymerase sigma factor 545 76.32 +2 598936..599712 + 258 87198571 - Saro_0547 - hypothetical protein 546 65.45 0 599767..600258 + 163 87198572 - Saro_0548 - asparaginase 547 68.31 0 600266..600691 - 141 87198573 - Saro_0549 - putative acetyltransferase 548 65.06 0 600682..602304 - 540 87198574 guaA Saro_0550 - bifunctional GMP synthase/glutamine amidotransferase protein 549 68.79 +1 602665..603510 + 281 87198575 - Saro_0551 - glutamyl-tRNA synthetase, class Ic 550 58.87 -2 603507..603737 + 76 87198576 - Saro_0552 - hypothetical protein 551 67.56 0 603757..604317 + 186 87198577 - Saro_0553 - ATP:cob(I)alamin adenosyltransferase 552 63.23 0 604391..605263 + 290 87198578 - Saro_0554 - 3-hydroxyacyl-CoA dehydrogenase 553 70.25 +1 605322..605684 + 120 87198579 - Saro_0555 - hypothetical protein 554 68.97 +1 605947..606336 - 129 87198580 - Saro_0556 - hypothetical protein 555 68.06 0 606585..607016 + 143 87198581 - Saro_0557 - nuclease (SNase-like) 556 65.09 0 607023..607658 - 211 87198582 - Saro_0558 - TetR family transcriptional regulator 557 66.95 0 607830..609581 + 583 87198583 - Saro_0559 - 5'-nucleotidase 558 68.55 +1 609600..610397 - 265 87198584 - Saro_0560 - hypothetical protein 559 64.54 0 610390..611001 - 203 87198585 - Saro_0561 - phospholipid/glycerol acyltransferase 560 63.72 0 611046..611723 - 225 87198586 - Saro_0562 - hypothetical protein 561 65.99 0 611833..612276 + 147 87198587 - Saro_0563 - hypothetical protein 562 68.42 0 612277..612960 - 227 87198588 - Saro_0564 - glutathione S-transferase-like 563 66.67 0 612965..613513 - 182 87198589 - Saro_0565 - glutathione peroxidase 564 64.09 0 613531..614190 - 219 87198590 - Saro_0566 - butyryl-CoA:acetate CoA transferase 565 72.13 +2 614213..615109 - 298 87198591 - Saro_0567 - hypothetical protein 566 64.28 0 615106..615816 - 236 87198592 - Saro_0568 - 3-oxoacid CoA-transferase, subunit A 567 67.35 0 615911..616783 + 290 87198593 - Saro_0569 - LysR family transcriptional regulator 568 67.29 0 616832..617476 - 214 87198594 - Saro_0570 - epoxide hydrolase domain-containing phosphatase 569 66.79 0 617619..618398 + 259 87198595 - Saro_0571 - hypothetical protein 570 70.44 +1 618437..618913 + 158 87198596 - Saro_0572 - membrane protein-like 571 68.35 0 619329..621647 + 772 87198597 - Saro_0573 - AAA family ATPase, CDC48 subfamily protein 572 68.88 +1 621723..623030 - 435 87198598 - Saro_0574 - signal transduction histidine kinase 573 72.59 +2 623203..623337 + 44 87198599 - Saro_0575 - 50S ribosomal protein L34P 574 68.30 0 623374..623862 + 162 87198600 - Saro_0576 - ribonuclease P protein component 575 65.24 0 623859..624068 + 69 87198601 - Saro_0577 - hypothetical protein 576 63.95 0 624133..625935 + 600 87198602 - Saro_0578 - putative inner membrane protein translocase component YidC 577 65.60 0 625932..626585 + 217 87198603 - Saro_0579 - GTPase EngB 578 66.22 0 626906..627580 + 224 87198604 - Saro_0580 - glutathione S-transferase-like 579 68.44 0 627580..628707 + 375 87198605 - Saro_0581 - succinyl-diaminopimelate desuccinylase 580 74.52 +2 628691..629263 - 190 87198606 - Saro_0582 - Smr protein/MutS2 581 71.24 +1 629263..630486 - 407 87198607 - Saro_0583 - MltA 582 67.20 0 630495..631238 - 247 87198608 - Saro_0584 - import inner membrane translocase, subunit Tim44 583 62.14 0 631271..631513 + 80 87198609 - Saro_0585 - hypothetical protein 584 64.76 0 631524..631994 + 156 87198610 - Saro_0586 - protein translocase subunit secB 585 67.81 0 632025..633596 + 523 87198611 - Saro_0587 - integral membrane protein MviN 586 65.78 0 633608..634627 + 339 87198612 - Saro_0588 - tryptophanyl-tRNA synthetase 587 63.81 0 634798..635496 + 232 87198613 - Saro_0589 - hypothetical protein 588 68.78 +1 635565..636038 - 157 87198614 - Saro_0590 - deoxyuridine 5'-triphosphate nucleotidohydrolase 589 69.19 +1 636019..637206 - 395 87198615 - Saro_0591 - phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase 590 67.92 0 637311..637709 + 132 87198616 - Saro_0592 - hypothetical protein 591 65.39 0 637714..638733 - 339 87198617 - Saro_0593 - acyltransferase 3 592 68.27 0 638968..640527 - 519 87198618 - Saro_0594 - 2-octaprenylphenol hydroxylase 593 65.18 0 640532..641269 - 245 87198619 - Saro_0595 - demethylmenaquinone methyltransferase / 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase 594 67.53 0 641330..642142 + 270 87198620 - Saro_0596 - formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase 595 65.41 0 642174..643286 - 370 87198621 - Saro_0597 - 4-hydroxyphenylpyruvate dioxygenase 596 65.89 0 643385..643897 + 170 87198622 - Saro_0598 - AsnC family transcriptional regulator 597 66.99 0 644032..644970 + 312 87198623 - Saro_0599 - LysR family transcriptional regulator 598 62.21 0 645059..645979 + 306 87198624 - Saro_0600 - sterol desaturase-like 599 68.95 +1 645976..647553 + 525 87198625 - Saro_0601 - sulfotransferase 600 66.67 0 647570..647929 + 119 87198626 - Saro_0602 - hypothetical protein 601 66.10 0 648031..648384 + 117 87198627 - Saro_0603 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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