version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 477 69.36 +1 521569..522087 + 172 87198503 - Saro_0478 - GCN5-related N-acetyltransferase 478 71.47 +1 522072..522821 - 249 87198504 - Saro_0479 - phosphomethylpyrimidine kinase 479 67.11 0 522823..523047 - 74 87198505 - Saro_0480 - hypothetical protein 480 66.59 0 523049..524386 - 445 87198506 - Saro_0481 - phosphoglucosamine mutase 481 69.30 +1 524457..525746 + 429 87198507 - Saro_0482 - sodium:dicarboxylate symporter 482 64.72 0 525874..526488 + 204 87198508 - Saro_0483 - superoxide dismutase 483 66.50 0 526476..527696 - 406 87198509 - Saro_0484 - hypothetical protein 484 68.31 0 527833..528441 - 202 87198510 - Saro_0485 - sigma-24 (FecI-like) 485 57.47 -2 528434..528607 - 57 87198511 - Saro_0486 - hypothetical protein 486 65.23 0 528858..530525 + 555 87198512 - Saro_0487 - signal transduction histidine kinase 487 66.04 0 530563..531360 - 265 87198513 - Saro_0488 - two-component response regulator 488 64.44 0 531406..531810 - 134 87198514 - Saro_0489 - response regulator receiver domain-containing protein 489 66.67 0 531932..532702 + 256 87198515 - Saro_0490 - CRP/FNR family transcriptional regulator 490 68.19 0 532919..533377 - 152 87198516 - Saro_0491 - response regulator receiver domain-containing protein 491 62.63 0 533476..534690 - 404 87198517 - Saro_0492 - hypothetical protein 492 65.86 0 534777..535892 + 371 87198518 - Saro_0493 - fatty acid desaturase 493 68.64 +1 535912..536418 - 168 87198519 - Saro_0494 - rhodanese-like protein 494 64.31 0 536474..537574 - 366 87198520 - Saro_0495 - permease YjgP/YjgQ 495 64.74 0 537564..538808 - 414 87198521 - Saro_0496 - permease YjgP/YjgQ 496 62.73 0 539046..539477 + 143 87198522 - Saro_0497 - hypothetical protein 497 62.20 0 539558..539938 - 126 87198523 - Saro_0498 - ATP-dependent Clp protease adaptor protein ClpS 498 64.01 0 540114..540980 - 288 87198524 - Saro_0499 - phasin 499 64.83 0 541124..543028 - 634 87198525 - Saro_0500 - Poly(R)-hydroxyalkanoic acid synthase, class I 500 64.01 0 543116..544357 + 413 87198526 - Saro_0501 - aminotransferase 501 65.68 0 544498..545304 + 268 87198527 - Saro_0502 - enoyl-CoA hydratase 502 69.05 +1 545339..546724 + 461 87198528 - Saro_0503 - ribonuclease II 503 58.27 -2 547191..547607 + 138 87198529 - Saro_0504 - Excalibur 504 62.53 0 548331..548717 + 128 87198530 - Saro_0505 - hypothetical protein 505 62.31 0 548866..549255 - 129 87198531 - Saro_0506 - IS4 family transposase 506 62.93 0 549276..549623 - 115 87198532 - Saro_0507 - IS5 family transposase 507 59.46 -1 550240..550572 - 110 87198533 - Saro_0509 - ferredoxin 508 62.15 0 550605..552242 - 545 87198534 - Saro_0510 - cyclohexanone monooxygenase 509 66.15 0 552466..553236 - 256 87198535 - Saro_0511 - enoyl-CoA hydratase/isomerase 510 63.05 0 553249..553995 - 248 87198536 - Saro_0512 - short-chain dehydrogenase/reductase SDR 511 65.19 0 554310..555392 + 360 87198537 - Saro_0513 - alcohol dehydrogenase, zinc-containing 512 62.40 0 555434..556699 + 421 87198538 - Saro_0514 - cytochrome P450 513 62.73 0 556696..557178 + 160 87198539 - Saro_0515 - flavin reductase-like, FMN-binding 514 61.90 -1 557175..557762 - 195 87198540 - Saro_0516 - TetR family transcriptional regulator 515 63.03 0 557813..558748 - 311 87198541 - Saro_0517 - gluconolactonase 516 63.58 0 558851..559693 - 280 87198542 - Saro_0518 - enoyl-CoA hydratase/isomerase 517 62.65 0 559882..561576 + 564 87198543 - Saro_0519 - AMP-dependent synthetase and ligase 518 63.18 0 561623..562768 + 381 87198544 - Saro_0520 - GTP cyclohydrolase II 519 61.56 -1 562789..563454 - 221 87198545 - Saro_0521 - TetR family transcriptional regulator 520 60.27 -1 563635..564759 + 374 87198546 - Saro_0522 - luciferase-like 521 60.90 -1 564837..567248 + 803 87198547 - Saro_0523 - TonB-dependent receptor 522 59.20 -1 567592..567765 - 57 87198548 - Saro_0524 - hypothetical protein 523 57.69 -2 567941..568564 - 207 87198549 - Saro_0525 - hypothetical protein 524 58.03 -2 568674..570248 + 524 87198550 - Saro_0526 - recombinase 525 58.78 -2 570248..571147 + 299 87198551 - Saro_0527 - ParB family protein 526 56.67 -2 571140..572099 + 319 87198552 - Saro_0528 - RepB plasmid partition 527 56.51 -2 572780..573094 - 104 87198553 - Saro_0529 - hypothetical protein 528 63.18 0 573909..575255 + 448 87198554 - Saro_0530 - hypothetical protein 529 65.01 0 575338..576366 - 342 87198555 - Saro_0531 - acyltransferase 3 530 62.12 0 576491..577765 - 424 87198556 - Saro_0532 - TetR family transcriptional regulator 531 64.20 0 577801..580191 - 796 87198557 - Saro_0533 - sulfatase 532 65.61 0 580304..582577 + 757 87198558 - Saro_0534 - sulfatase 533 63.62 0 582643..585204 + 853 87198559 - Saro_0535 - TonB-dependent receptor 534 63.50 0 585343..586290 + 315 87198560 - Saro_0536 - hypothetical protein 535 64.40 0 586351..587277 - 308 87198561 - Saro_0537 - LysR family transcriptional regulator 536 63.52 0 587562..588896 + 444 87198562 - Saro_0538 - Rieske (2Fe-2S) protein 537 59.47 -1 588893..589378 + 161 87198563 - Saro_0539 - 2-chlorobenzoate 1,2-dioxygenase 538 67.30 0 589371..590162 + 263 87198564 benD Saro_0540 - 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 539 66.12 0 590232..591146 + 304 87198565 - Saro_0541 - LysR family transcriptional regulator 540 64.92 0 591233..592552 + 439 87198566 - Saro_0542 - glycoside hydrolase family protein 541 66.28 0 592634..593659 + 341 87198567 - Saro_0543 - galactose-1-phosphate uridylyltransferase 542 69.03 +1 593656..594798 + 380 87198568 - Saro_0544 - galactokinase 543 64.49 0 594815..597991 - 1058 87198569 - Saro_0545 - Outer membrane autotransporter barrel protein 544 65.43 0 598289..598936 + 215 87198570 - Saro_0546 - RNA polymerase sigma factor 545 76.32 +2 598936..599712 + 258 87198571 - Saro_0547 - hypothetical protein 546 65.45 0 599767..600258 + 163 87198572 - Saro_0548 - asparaginase 547 68.31 0 600266..600691 - 141 87198573 - Saro_0549 - putative acetyltransferase 548 65.06 0 600682..602304 - 540 87198574 guaA Saro_0550 - bifunctional GMP synthase/glutamine amidotransferase protein 549 68.79 +1 602665..603510 + 281 87198575 - Saro_0551 - glutamyl-tRNA synthetase, class Ic 550 58.87 -2 603507..603737 + 76 87198576 - Saro_0552 - hypothetical protein 551 67.56 0 603757..604317 + 186 87198577 - Saro_0553 - ATP:cob(I)alamin adenosyltransferase 552 63.23 0 604391..605263 + 290 87198578 - Saro_0554 - 3-hydroxyacyl-CoA dehydrogenase 553 70.25 +1 605322..605684 + 120 87198579 - Saro_0555 - hypothetical protein 554 68.97 +1 605947..606336 - 129 87198580 - Saro_0556 - hypothetical protein 555 68.06 0 606585..607016 + 143 87198581 - Saro_0557 - nuclease (SNase-like) 556 65.09 0 607023..607658 - 211 87198582 - Saro_0558 - TetR family transcriptional regulator 557 66.95 0 607830..609581 + 583 87198583 - Saro_0559 - 5'-nucleotidase 558 68.55 +1 609600..610397 - 265 87198584 - Saro_0560 - hypothetical protein 559 64.54 0 610390..611001 - 203 87198585 - Saro_0561 - phospholipid/glycerol acyltransferase 560 63.72 0 611046..611723 - 225 87198586 - Saro_0562 - hypothetical protein 561 65.99 0 611833..612276 + 147 87198587 - Saro_0563 - hypothetical protein 562 68.42 0 612277..612960 - 227 87198588 - Saro_0564 - glutathione S-transferase-like 563 66.67 0 612965..613513 - 182 87198589 - Saro_0565 - glutathione peroxidase 564 64.09 0 613531..614190 - 219 87198590 - Saro_0566 - butyryl-CoA:acetate CoA transferase 565 72.13 +2 614213..615109 - 298 87198591 - Saro_0567 - hypothetical protein 566 64.28 0 615106..615816 - 236 87198592 - Saro_0568 - 3-oxoacid CoA-transferase, subunit A 567 67.35 0 615911..616783 + 290 87198593 - Saro_0569 - LysR family transcriptional regulator 568 67.29 0 616832..617476 - 214 87198594 - Saro_0570 - epoxide hydrolase domain-containing phosphatase 569 66.79 0 617619..618398 + 259 87198595 - Saro_0571 - hypothetical protein 570 70.44 +1 618437..618913 + 158 87198596 - Saro_0572 - membrane protein-like 571 68.35 0 619329..621647 + 772 87198597 - Saro_0573 - AAA family ATPase, CDC48 subfamily protein 572 68.88 +1 621723..623030 - 435 87198598 - Saro_0574 - signal transduction histidine kinase 573 72.59 +2 623203..623337 + 44 87198599 - Saro_0575 - 50S ribosomal protein L34P 574 68.30 0 623374..623862 + 162 87198600 - Saro_0576 - ribonuclease P protein component 575 65.24 0 623859..624068 + 69 87198601 - Saro_0577 - hypothetical protein 576 63.95 0 624133..625935 + 600 87198602 - Saro_0578 - putative inner membrane protein translocase component YidC 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.