version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 419 63.25 0 458344..458694 + 116 87198445 - Saro_0420 - hypothetical protein 420 65.62 0 458696..459172 + 158 87198446 - Saro_0421 - crossover junction endodeoxyribonuclease RuvC 421 67.80 0 459269..459883 + 204 87198447 - Saro_0422 - Holliday junction DNA helicase RuvA 422 66.96 0 459887..460915 + 342 87198448 ruvB Saro_0423 - Holliday junction DNA helicase B 423 69.12 +1 461134..462072 + 312 87198449 - Saro_0424 - hypothetical protein 424 64.38 0 462232..464904 - 890 87198450 - Saro_0425 - aconitase 425 67.45 0 465142..466032 - 296 87198451 - Saro_0426 - hypothetical protein 426 66.67 0 466174..467673 + 499 87198452 - Saro_0427 - hypothetical protein 427 66.99 0 467869..468492 - 207 87198453 - Saro_0428 - twin-arginine translocation pathway signal 428 65.48 0 468544..469047 - 167 87198454 - Saro_0429 - GCN5-related N-acetyltransferase 429 60.76 -1 469082..469318 - 78 87198455 - Saro_0430 - hypothetical protein 430 64.72 0 469415..469723 - 102 87198456 - Saro_0431 - hypothetical protein 431 67.49 0 469798..471252 + 484 87198457 - Saro_0432 - pyruvate kinase 432 68.23 0 471309..471884 - 191 87198458 - Saro_0433 - hypothetical protein 433 71.69 +1 471997..472533 + 178 87198459 - Saro_0434 - thiamine monophosphate synthase 434 66.92 0 472628..475009 + 793 87198460 - Saro_0435 - DNA translocase FtsK 435 67.17 0 475017..475415 - 132 87198461 - Saro_0436 - thioesterase-like 436 64.88 0 475412..477487 - 691 87198462 - Saro_0437 - oligopeptidase B 437 68.33 0 477544..479349 + 601 87198463 - Saro_0438 - peptidase M24 438 66.12 0 479405..479773 + 122 87198464 - Saro_0439 - glyoxalase/bleomycin resistance protein/dioxygenase 439 64.46 0 480001..480681 + 226 87198465 - Saro_0440 - calcium-binding EF-hand protein 440 63.96 0 480687..481424 + 245 87198466 - Saro_0441 - two component transcriptional regulator 441 68.96 +1 481428..482825 + 465 87198467 - Saro_0442 - periplasmic sensor signal transduction histidine kinase 442 66.70 0 482963..485629 + 888 87198468 - Saro_0443 - peptidase M1, membrane alanine aminopeptidase 443 66.22 0 485699..487273 - 524 87198469 - Saro_0444 - protein of unknown function DUF853, NPT hydrolase putative 444 68.74 +1 487393..489180 + 595 87198470 - Saro_0445 - para-aminobenzoate synthase, component I 445 68.21 0 489185..490354 + 389 87198471 - Saro_0446 - aminotransferase 446 66.82 0 490351..491019 + 222 87198472 - Saro_0447 - pseudouridylate synthase 447 66.91 0 491021..491434 + 137 87198473 - Saro_0448 - class I peptide chain release factor domain-containing protein 448 67.68 0 491483..492766 - 427 87198474 - Saro_0449 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 449 63.90 0 492864..493802 + 312 87198475 - Saro_0450 - UDP-glucose pyrophosphorylase 450 66.07 0 493816..494490 - 224 87198476 - Saro_0451 - TetR family transcriptional regulator 451 67.56 0 494678..495793 + 371 87198477 - Saro_0452 - oxidoreductase-like 452 65.44 0 495805..496860 + 351 87198478 - Saro_0453 - xylose isomerase-like TIM barrel 453 62.25 0 497246..499669 + 807 87198479 - Saro_0454 - TonB-dependent receptor 454 65.69 0 499747..500358 - 203 87198480 - Saro_0455 - hypothetical protein 455 64.81 0 500603..501355 + 250 87198481 - Saro_0456 - electron transfer flavoprotein beta-subunit 456 68.38 0 501355..502287 + 310 87198482 - Saro_0457 - electron transfer flavoprotein, alpha subunit 457 61.35 -1 502433..503392 + 319 87198483 - Saro_0458 - hypothetical protein 458 65.16 0 503393..503857 - 154 87198484 - Saro_0459 - GCN5-related N-acetyltransferase 459 61.15 -1 504045..504479 + 144 87198485 - Saro_0460 - hypothetical protein 460 69.24 +1 504527..505498 - 323 87198486 - Saro_0461 - RDD 461 67.97 0 505498..506568 - 356 87198487 - Saro_0462 - hypothetical protein 462 70.55 +1 506565..507851 - 428 87198488 - Saro_0463 - hypothetical protein 463 68.76 +1 507890..508846 - 318 87198489 - Saro_0464 - ATPase AAA_3 464 69.78 +1 508864..510147 - 427 87198490 - Saro_0465 - hypothetical protein 465 71.97 +2 510144..510803 - 219 87198491 - Saro_0466 - hypothetical protein 466 66.44 0 510856..511746 - 296 87198492 - Saro_0467 - prephenate dehydratase 467 65.99 0 511901..512791 + 296 87198493 - Saro_0468 - cytochrome c, class I 468 67.96 0 512851..513237 - 128 87198494 - Saro_0469 - putative transcriptional regulator 469 69.62 +1 513332..513940 + 202 87198495 - Saro_0470 - TrkA-N 470 69.66 +1 513974..514474 - 166 87198496 - Saro_0471 - hypothetical protein 471 65.47 0 514536..515204 - 222 87198497 - Saro_0472 - ribosomal RNA methyltransferase RrmJ/FtsJ 472 69.65 +1 515201..516508 - 435 87198498 - Saro_0473 - Ppx/GppA phosphatase 473 65.72 0 516979..518454 - 491 87198499 - Saro_0474 - sulfatase 474 66.67 0 518616..519611 - 331 87198500 - Saro_0475 - aldo/keto reductase 475 68.03 0 519733..520689 + 318 87198501 - Saro_0476 - LysR family transcriptional regulator 476 61.32 -1 520686..521564 + 292 87198502 - Saro_0477 - hypothetical protein 477 69.36 +1 521569..522087 + 172 87198503 - Saro_0478 - GCN5-related N-acetyltransferase 478 71.47 +1 522072..522821 - 249 87198504 - Saro_0479 - phosphomethylpyrimidine kinase 479 67.11 0 522823..523047 - 74 87198505 - Saro_0480 - hypothetical protein 480 66.59 0 523049..524386 - 445 87198506 - Saro_0481 - phosphoglucosamine mutase 481 69.30 +1 524457..525746 + 429 87198507 - Saro_0482 - sodium:dicarboxylate symporter 482 64.72 0 525874..526488 + 204 87198508 - Saro_0483 - superoxide dismutase 483 66.50 0 526476..527696 - 406 87198509 - Saro_0484 - hypothetical protein 484 68.31 0 527833..528441 - 202 87198510 - Saro_0485 - sigma-24 (FecI-like) 485 57.47 -2 528434..528607 - 57 87198511 - Saro_0486 - hypothetical protein 486 65.23 0 528858..530525 + 555 87198512 - Saro_0487 - signal transduction histidine kinase 487 66.04 0 530563..531360 - 265 87198513 - Saro_0488 - two-component response regulator 488 64.44 0 531406..531810 - 134 87198514 - Saro_0489 - response regulator receiver domain-containing protein 489 66.67 0 531932..532702 + 256 87198515 - Saro_0490 - CRP/FNR family transcriptional regulator 490 68.19 0 532919..533377 - 152 87198516 - Saro_0491 - response regulator receiver domain-containing protein 491 62.63 0 533476..534690 - 404 87198517 - Saro_0492 - hypothetical protein 492 65.86 0 534777..535892 + 371 87198518 - Saro_0493 - fatty acid desaturase 493 68.64 +1 535912..536418 - 168 87198519 - Saro_0494 - rhodanese-like protein 494 64.31 0 536474..537574 - 366 87198520 - Saro_0495 - permease YjgP/YjgQ 495 64.74 0 537564..538808 - 414 87198521 - Saro_0496 - permease YjgP/YjgQ 496 62.73 0 539046..539477 + 143 87198522 - Saro_0497 - hypothetical protein 497 62.20 0 539558..539938 - 126 87198523 - Saro_0498 - ATP-dependent Clp protease adaptor protein ClpS 498 64.01 0 540114..540980 - 288 87198524 - Saro_0499 - phasin 499 64.83 0 541124..543028 - 634 87198525 - Saro_0500 - Poly(R)-hydroxyalkanoic acid synthase, class I 500 64.01 0 543116..544357 + 413 87198526 - Saro_0501 - aminotransferase 501 65.68 0 544498..545304 + 268 87198527 - Saro_0502 - enoyl-CoA hydratase 502 69.05 +1 545339..546724 + 461 87198528 - Saro_0503 - ribonuclease II 503 58.27 -2 547191..547607 + 138 87198529 - Saro_0504 - Excalibur 504 62.53 0 548331..548717 + 128 87198530 - Saro_0505 - hypothetical protein 505 62.31 0 548866..549255 - 129 87198531 - Saro_0506 - IS4 family transposase 506 62.93 0 549276..549623 - 115 87198532 - Saro_0507 - IS5 family transposase 507 59.46 -1 550240..550572 - 110 87198533 - Saro_0509 - ferredoxin 508 62.15 0 550605..552242 - 545 87198534 - Saro_0510 - cyclohexanone monooxygenase 509 66.15 0 552466..553236 - 256 87198535 - Saro_0511 - enoyl-CoA hydratase/isomerase 510 63.05 0 553249..553995 - 248 87198536 - Saro_0512 - short-chain dehydrogenase/reductase SDR 511 65.19 0 554310..555392 + 360 87198537 - Saro_0513 - alcohol dehydrogenase, zinc-containing 512 62.40 0 555434..556699 + 421 87198538 - Saro_0514 - cytochrome P450 513 62.73 0 556696..557178 + 160 87198539 - Saro_0515 - flavin reductase-like, FMN-binding 514 61.90 -1 557175..557762 - 195 87198540 - Saro_0516 - TetR family transcriptional regulator 515 63.03 0 557813..558748 - 311 87198541 - Saro_0517 - gluconolactonase 516 63.58 0 558851..559693 - 280 87198542 - Saro_0518 - enoyl-CoA hydratase/isomerase 517 62.65 0 559882..561576 + 564 87198543 - Saro_0519 - AMP-dependent synthetase and ligase 518 63.18 0 561623..562768 + 381 87198544 - Saro_0520 - GTP cyclohydrolase II 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.