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Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 343 58.78 -2 368386..369501 - 371 87198369 - Saro_0344 - high-affinity nickel-transporter 344 58.91 -1 369514..371550 - 678 87198370 - Saro_0345 - TonB-dependent receptor 345 61.92 -1 372308..373762 + 484 87198371 - Saro_0346 - hypothetical protein 346 61.01 -1 373704..374039 - 111 87198372 - Saro_0347 - hypothetical protein 347 63.40 0 374343..375047 + 234 87198373 - Saro_0348 - hypothetical protein 348 66.13 0 375088..376569 + 493 87198374 - Saro_0349 - hypothetical protein 349 64.73 0 376858..378921 + 687 87198375 - Saro_0350 - McrBC 5-methylcytosine restriction system component-like 350 63.39 0 378931..379908 + 325 87198376 - Saro_0351 - hypothetical protein 351 60.86 -1 379978..385092 + 1704 87198377 - Saro_0352 - DEAD/DEAH box helicase-like 352 64.35 0 385089..387890 + 933 87198378 - Saro_0353 - helicase-like 353 64.34 0 387890..391849 + 1319 87198379 - Saro_0354 - putative type II DNA modification enzyme 354 61.16 -1 391849..392592 + 247 87198380 - Saro_0355 - hypothetical protein 355 57.67 -2 392607..393173 + 188 87198381 - Saro_0356 - hypothetical protein 356 58.88 -2 393322..394233 + 303 87198382 - Saro_0357 - Abi-like 357 62.66 0 394230..395027 + 265 87198383 - Saro_0358 - putative restriction endonuclease 358 66.49 0 395159..396898 - 579 87198384 - Saro_0359 - hypothetical protein 359 66.52 0 397143..397844 - 233 87198385 - Saro_0360 - lytic transglycosylase, catalytic 360 64.56 0 397848..398180 - 110 87198386 - Saro_0361 - hypothetical protein 361 68.39 0 398177..398755 - 192 87198387 - Saro_0362 - conjugal transfer protein precursor 362 67.96 0 398752..399291 - 179 87198388 - Saro_0363 - hypothetical protein 363 65.87 0 399438..400316 - 292 87198389 - Saro_0364 - putative replication protein A 364 66.67 0 400326..400598 - 90 87198390 - Saro_0365 - hypothetical protein 365 67.90 0 400725..401129 - 134 87198391 - Saro_0366 - hypothetical protein 366 60.98 -1 401654..401917 - 87 87198392 - Saro_0367 - hypothetical protein 367 64.50 0 402133..402363 + 76 87198393 - Saro_0368 - XRE family transcriptional regulator 368 62.65 0 402413..402736 - 107 87198394 - Saro_0369 - hypothetical protein 369 63.58 0 402822..403274 - 150 87198395 - Saro_0370 - hypothetical protein 370 63.70 0 403323..403727 - 134 87198396 - Saro_0371 - hypothetical protein 371 63.52 0 403872..404030 - 52 87198397 - Saro_0372 - hypothetical protein 372 61.29 -1 404582..405697 + 371 87198398 - Saro_0373 - filamentation induced by cAMP protein Fic 373 63.39 0 406050..407546 + 498 87198399 - Saro_0374 - sulphate transporter 374 65.59 0 407653..408582 - 309 87198400 - Saro_0375 - hypothetical protein 375 66.28 0 408916..409953 - 345 87198401 - Saro_0376 - hypothetical protein 376 67.56 0 410029..414408 - 1459 87198402 - Saro_0377 - putative methylase/helicase 377 67.03 0 414602..415432 - 276 87198403 - Saro_0378 - hypothetical protein 378 64.35 0 415429..415902 - 157 87198404 - Saro_0379 - hypothetical protein 379 65.50 0 416008..418149 - 713 87198405 - Saro_0380 - ParB family protein 380 68.26 0 418306..419244 - 312 87198406 - Saro_0381 - putative ArdC antirestriction protein 381 64.13 0 419819..420133 - 104 87198407 - Saro_0382 - TraR/DksA family transcriptional regulator 382 66.05 0 420278..421420 + 380 87198408 - Saro_0383 - hypothetical protein 383 62.02 -1 421508..422518 + 336 87198409 - Saro_0384 - sodium/calcium exchanger membrane region 384 67.38 0 422876..423853 + 325 87198410 - Saro_0385 - hypothetical protein 385 63.04 0 423854..424543 - 229 87198411 - Saro_0386 - two component transcriptional regulator 386 63.35 0 424543..426051 - 502 87198412 - Saro_0387 - periplasmic sensor signal transduction histidine kinase 387 66.48 0 426165..426689 + 174 87198413 - Saro_0388 - OmpA/MotB 388 59.72 -1 426706..426993 + 95 87198414 - Saro_0389 - hypothetical protein 389 64.04 0 427167..427850 + 227 87198415 - Saro_0390 - MotA/TolQ/ExbB proton channel 390 66.67 0 427850..428329 + 159 87198416 - Saro_0391 - biopolymer transport protein ExbD/TolR 391 70.37 +1 428326..429432 + 368 87198417 - Saro_0392 - hypothetical protein 392 63.94 0 429429..430784 + 451 87198418 tolB Saro_0393 - translocation protein TolB 393 63.35 0 431251..431793 + 180 87198419 - Saro_0394 - hypothetical protein 394 63.55 0 431793..433526 + 577 87198420 - Saro_0395 - potassium efflux system protein 395 61.96 -1 433539..434387 + 282 87198421 - Saro_0396 - hypothetical protein 396 57.28 -2 434462..435793 + 443 87198422 - Saro_0397 - cation transporter 397 55.26 -2 435786..436460 + 224 87198423 - Saro_0398 - TrkA-N 398 62.94 0 436525..439260 - 911 87198424 - Saro_0399 - ATPase, E1-E2 type 399 63.59 0 439359..440204 - 281 87198425 - Saro_0400 - hypothetical protein 400 64.35 0 440475..441857 + 460 87198426 - Saro_0401 - hypothetical protein 401 59.56 -1 441880..442653 + 257 87198427 - Saro_0402 - SPFH domain-containing protein/band 7 family protein 402 60.42 -1 442737..443264 + 175 87198428 - Saro_0403 - hypothetical protein 403 55.38 -2 443284..443673 + 129 87198429 - Saro_0404 - hypothetical protein 404 61.21 -1 443690..445009 - 439 87198430 - Saro_0405 - di- and tricarboxylate transporters-like 405 62.41 0 445149..446018 + 289 87198431 - Saro_0406 - hypothetical protein 406 61.35 -1 446037..447314 - 425 87198432 - Saro_0407 - Na+/H+ antiporter NhaA 407 65.36 0 447796..448563 + 255 87198433 - Saro_0408 - hypothetical protein 408 67.61 0 448658..449185 + 175 87198434 - Saro_0409 - hypothetical protein 409 67.04 0 449193..450791 - 532 87198435 - Saro_0410 - L-aspartate oxidase 410 64.09 0 451251..452258 - 335 87198436 - Saro_0411 - ABC transporter related 411 64.68 0 452294..452494 + 66 87198437 - Saro_0412 - hypothetical protein 412 67.15 0 452563..454002 + 479 87198438 - Saro_0413 - peptidase U62, modulator of DNA gyrase 413 67.92 0 454077..454475 + 132 87198439 - Saro_0414 - glutathione-dependent formaldehyde-activating, GFA 414 66.43 0 454543..454965 + 140 87198440 - Saro_0415 - hypothetical protein 415 65.95 0 455007..455561 + 184 87198441 - Saro_0416 - GCN5-related N-acetyltransferase 416 66.04 0 455622..456746 + 374 87198442 ispG Saro_0417 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 417 70.55 +1 456748..457443 - 231 87198443 - Saro_0418 - hypothetical protein 418 63.40 0 457574..458338 + 254 87198444 - Saro_0419 - hypothetical protein 419 63.25 0 458344..458694 + 116 87198445 - Saro_0420 - hypothetical protein 420 65.62 0 458696..459172 + 158 87198446 - Saro_0421 - crossover junction endodeoxyribonuclease RuvC 421 67.80 0 459269..459883 + 204 87198447 - Saro_0422 - Holliday junction DNA helicase RuvA 422 66.96 0 459887..460915 + 342 87198448 ruvB Saro_0423 - Holliday junction DNA helicase B 423 69.12 +1 461134..462072 + 312 87198449 - Saro_0424 - hypothetical protein 424 64.38 0 462232..464904 - 890 87198450 - Saro_0425 - aconitase 425 67.45 0 465142..466032 - 296 87198451 - Saro_0426 - hypothetical protein 426 66.67 0 466174..467673 + 499 87198452 - Saro_0427 - hypothetical protein 427 66.99 0 467869..468492 - 207 87198453 - Saro_0428 - twin-arginine translocation pathway signal 428 65.48 0 468544..469047 - 167 87198454 - Saro_0429 - GCN5-related N-acetyltransferase 429 60.76 -1 469082..469318 - 78 87198455 - Saro_0430 - hypothetical protein 430 64.72 0 469415..469723 - 102 87198456 - Saro_0431 - hypothetical protein 431 67.49 0 469798..471252 + 484 87198457 - Saro_0432 - pyruvate kinase 432 68.23 0 471309..471884 - 191 87198458 - Saro_0433 - hypothetical protein 433 71.69 +1 471997..472533 + 178 87198459 - Saro_0434 - thiamine monophosphate synthase 434 66.92 0 472628..475009 + 793 87198460 - Saro_0435 - DNA translocase FtsK 435 67.17 0 475017..475415 - 132 87198461 - Saro_0436 - thioesterase-like 436 64.88 0 475412..477487 - 691 87198462 - Saro_0437 - oligopeptidase B 437 68.33 0 477544..479349 + 601 87198463 - Saro_0438 - peptidase M24 438 66.12 0 479405..479773 + 122 87198464 - Saro_0439 - glyoxalase/bleomycin resistance protein/dioxygenase 439 64.46 0 480001..480681 + 226 87198465 - Saro_0440 - calcium-binding EF-hand protein 440 63.96 0 480687..481424 + 245 87198466 - Saro_0441 - two component transcriptional regulator 441 68.96 +1 481428..482825 + 465 87198467 - Saro_0442 - periplasmic sensor signal transduction histidine kinase 442 66.70 0 482963..485629 + 888 87198468 - Saro_0443 - peptidase M1, membrane alanine aminopeptidase 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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