version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 308 71.09 +1 334136..335332 - 398 87198334 - Saro_0309 - conjugation TrbI-like protein 309 68.80 +1 335329..336360 - 343 87198335 - Saro_0310 - conjugal transfer protein TrbG/VirB9/CagX 310 66.37 0 336357..337040 - 227 87198336 - Saro_0311 - conjugal transfer protein 311 66.74 0 337044..338354 - 436 87198337 - Saro_0312 - TrbL/VirB6 plasmid conjugal transfer protein 312 68.54 +1 338356..338676 - 106 87198338 - Saro_0313 - hypothetical protein 313 67.44 0 338682..339458 - 258 87198339 - Saro_0314 - putative conjugal transfer protein TrbJ 314 66.99 0 339464..341929 - 821 87198340 - Saro_0315 - CagE, TrbE, VirB component of type IV transporter system 315 71.38 +1 341936..342211 - 91 87198341 - Saro_0316 - conjugal transfer protein TrbD 316 66.07 0 342211..342543 - 110 87198342 - Saro_0317 - conjugal transfer protein TrbC 317 70.02 +1 342540..343523 - 327 87198343 - Saro_0318 - type II secretion system protein E 318 66.15 0 343777..344160 - 127 87198344 - Saro_0319 - hypothetical protein 319 62.99 0 344157..346142 - 661 87198345 - Saro_0320 - TRAG protein 320 55.56 -2 346387..346593 + 68 87198346 - Saro_0321 - hypothetical protein 321 62.88 0 347120..347647 - 175 87198347 - Saro_0322 - adenosylcobinamide kinase 322 64.91 0 347644..349119 - 491 87198348 - Saro_0323 - adenosylcobyric acid synthase (glutamine-hydrolysing) 323 66.77 0 349119..350069 - 316 87198349 - Saro_0324 - adenosylcobinamide-phosphate synthase 324 67.48 0 350062..351045 - 327 87198350 - Saro_0325 - aminotransferase 325 65.86 0 351042..351782 - 246 87198351 - Saro_0326 - cobalamin-5'-phosphate synthase 326 67.54 0 351779..352348 - 189 87198352 - Saro_0327 - phosphoglycerate/bisphosphoglycerate mutase 327 68.63 +1 352345..353361 - 338 87198353 - Saro_0328 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 328 67.40 0 353358..353765 - 135 87198354 - Saro_0329 - hypothetical protein 329 65.00 0 353791..354390 - 199 87198355 - Saro_0330 - Cob(II)yrinic acid a,c-diamide reductase 330 60.77 -1 354453..355079 - 208 87198356 - Saro_0331 - cob(I)yrinic acid a,c-diamide adenosyltransferase 331 65.49 0 355069..355833 - 254 87198357 - Saro_0332 - precorrin 6A synthase 332 68.01 0 355830..357164 - 444 87198358 - Saro_0333 - cobyrinic acid a,c-diamide synthase 333 68.58 +1 357161..357946 - 261 87198359 - Saro_0334 - precorrin-4 C11-methyltransferase 334 70.60 +1 357943..358323 - 126 87198360 - Saro_0335 - precorrin methylase 335 68.33 0 358320..359519 - 399 87198361 - Saro_0336 - precorrin-6Y C5,15-methyltransferase (decarboxylating) 336 68.77 +1 359527..360288 + 253 87198362 - Saro_0337 - cobalt-precorrin-6x reductase 337 66.54 0 360252..361040 - 262 87198363 - Saro_0338 - precorrin-3 methyltransferase 338 64.77 0 361037..361774 - 245 87198364 - Saro_0339 - precorrin-2 C20-methyltransferase 339 66.83 0 361771..362400 - 209 87198365 cobH Saro_0340 - precorrin-8X methylmutase 340 68.24 0 362400..363545 - 381 87198366 - Saro_0341 - precorrin-3B synthase 341 67.49 0 363542..366826 - 1094 87198367 cobN Saro_0342 - cobaltochelatase 342 65.62 0 366837..367889 - 350 87198368 - Saro_0343 - cobalamin biosynthesis CobW 343 58.78 -2 368386..369501 - 371 87198369 - Saro_0344 - high-affinity nickel-transporter 344 58.91 -1 369514..371550 - 678 87198370 - Saro_0345 - TonB-dependent receptor 345 61.92 -1 372308..373762 + 484 87198371 - Saro_0346 - hypothetical protein 346 61.01 -1 373704..374039 - 111 87198372 - Saro_0347 - hypothetical protein 347 63.40 0 374343..375047 + 234 87198373 - Saro_0348 - hypothetical protein 348 66.13 0 375088..376569 + 493 87198374 - Saro_0349 - hypothetical protein 349 64.73 0 376858..378921 + 687 87198375 - Saro_0350 - McrBC 5-methylcytosine restriction system component-like 350 63.39 0 378931..379908 + 325 87198376 - Saro_0351 - hypothetical protein 351 60.86 -1 379978..385092 + 1704 87198377 - Saro_0352 - DEAD/DEAH box helicase-like 352 64.35 0 385089..387890 + 933 87198378 - Saro_0353 - helicase-like 353 64.34 0 387890..391849 + 1319 87198379 - Saro_0354 - putative type II DNA modification enzyme 354 61.16 -1 391849..392592 + 247 87198380 - Saro_0355 - hypothetical protein 355 57.67 -2 392607..393173 + 188 87198381 - Saro_0356 - hypothetical protein 356 58.88 -2 393322..394233 + 303 87198382 - Saro_0357 - Abi-like 357 62.66 0 394230..395027 + 265 87198383 - Saro_0358 - putative restriction endonuclease 358 66.49 0 395159..396898 - 579 87198384 - Saro_0359 - hypothetical protein 359 66.52 0 397143..397844 - 233 87198385 - Saro_0360 - lytic transglycosylase, catalytic 360 64.56 0 397848..398180 - 110 87198386 - Saro_0361 - hypothetical protein 361 68.39 0 398177..398755 - 192 87198387 - Saro_0362 - conjugal transfer protein precursor 362 67.96 0 398752..399291 - 179 87198388 - Saro_0363 - hypothetical protein 363 65.87 0 399438..400316 - 292 87198389 - Saro_0364 - putative replication protein A 364 66.67 0 400326..400598 - 90 87198390 - Saro_0365 - hypothetical protein 365 67.90 0 400725..401129 - 134 87198391 - Saro_0366 - hypothetical protein 366 60.98 -1 401654..401917 - 87 87198392 - Saro_0367 - hypothetical protein 367 64.50 0 402133..402363 + 76 87198393 - Saro_0368 - XRE family transcriptional regulator 368 62.65 0 402413..402736 - 107 87198394 - Saro_0369 - hypothetical protein 369 63.58 0 402822..403274 - 150 87198395 - Saro_0370 - hypothetical protein 370 63.70 0 403323..403727 - 134 87198396 - Saro_0371 - hypothetical protein 371 63.52 0 403872..404030 - 52 87198397 - Saro_0372 - hypothetical protein 372 61.29 -1 404582..405697 + 371 87198398 - Saro_0373 - filamentation induced by cAMP protein Fic 373 63.39 0 406050..407546 + 498 87198399 - Saro_0374 - sulphate transporter 374 65.59 0 407653..408582 - 309 87198400 - Saro_0375 - hypothetical protein 375 66.28 0 408916..409953 - 345 87198401 - Saro_0376 - hypothetical protein 376 67.56 0 410029..414408 - 1459 87198402 - Saro_0377 - putative methylase/helicase 377 67.03 0 414602..415432 - 276 87198403 - Saro_0378 - hypothetical protein 378 64.35 0 415429..415902 - 157 87198404 - Saro_0379 - hypothetical protein 379 65.50 0 416008..418149 - 713 87198405 - Saro_0380 - ParB family protein 380 68.26 0 418306..419244 - 312 87198406 - Saro_0381 - putative ArdC antirestriction protein 381 64.13 0 419819..420133 - 104 87198407 - Saro_0382 - TraR/DksA family transcriptional regulator 382 66.05 0 420278..421420 + 380 87198408 - Saro_0383 - hypothetical protein 383 62.02 -1 421508..422518 + 336 87198409 - Saro_0384 - sodium/calcium exchanger membrane region 384 67.38 0 422876..423853 + 325 87198410 - Saro_0385 - hypothetical protein 385 63.04 0 423854..424543 - 229 87198411 - Saro_0386 - two component transcriptional regulator 386 63.35 0 424543..426051 - 502 87198412 - Saro_0387 - periplasmic sensor signal transduction histidine kinase 387 66.48 0 426165..426689 + 174 87198413 - Saro_0388 - OmpA/MotB 388 59.72 -1 426706..426993 + 95 87198414 - Saro_0389 - hypothetical protein 389 64.04 0 427167..427850 + 227 87198415 - Saro_0390 - MotA/TolQ/ExbB proton channel 390 66.67 0 427850..428329 + 159 87198416 - Saro_0391 - biopolymer transport protein ExbD/TolR 391 70.37 +1 428326..429432 + 368 87198417 - Saro_0392 - hypothetical protein 392 63.94 0 429429..430784 + 451 87198418 tolB Saro_0393 - translocation protein TolB 393 63.35 0 431251..431793 + 180 87198419 - Saro_0394 - hypothetical protein 394 63.55 0 431793..433526 + 577 87198420 - Saro_0395 - potassium efflux system protein 395 61.96 -1 433539..434387 + 282 87198421 - Saro_0396 - hypothetical protein 396 57.28 -2 434462..435793 + 443 87198422 - Saro_0397 - cation transporter 397 55.26 -2 435786..436460 + 224 87198423 - Saro_0398 - TrkA-N 398 62.94 0 436525..439260 - 911 87198424 - Saro_0399 - ATPase, E1-E2 type 399 63.59 0 439359..440204 - 281 87198425 - Saro_0400 - hypothetical protein 400 64.35 0 440475..441857 + 460 87198426 - Saro_0401 - hypothetical protein 401 59.56 -1 441880..442653 + 257 87198427 - Saro_0402 - SPFH domain-containing protein/band 7 family protein 402 60.42 -1 442737..443264 + 175 87198428 - Saro_0403 - hypothetical protein 403 55.38 -2 443284..443673 + 129 87198429 - Saro_0404 - hypothetical protein 404 61.21 -1 443690..445009 - 439 87198430 - Saro_0405 - di- and tricarboxylate transporters-like 405 62.41 0 445149..446018 + 289 87198431 - Saro_0406 - hypothetical protein 406 61.35 -1 446037..447314 - 425 87198432 - Saro_0407 - Na+/H+ antiporter NhaA 407 65.36 0 447796..448563 + 255 87198433 - Saro_0408 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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