version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3223 63.74 0 3458458..3459003 - 181 87201249 - Saro_3237 - dTDP-4-dehydrorhamnose 3,5-epimerase 3224 61.48 -1 3459000..3459905 - 301 87201250 - Saro_3238 - glucose-1-phosphate thymidylyltransferase 3225 67.39 0 3460109..3461353 - 414 87201251 - Saro_3239 - hypothetical protein 3226 67.49 0 3461337..3463040 - 567 87201252 - Saro_3240 - ABC transporter related 3227 65.69 0 3463030..3464979 - 649 87201253 - Saro_3241 - asparagine synthase 3228 62.77 0 3464976..3465488 - 170 87201254 - Saro_3242 - hypothetical protein 3229 55.56 -2 3465481..3465750 - 89 87201255 - Saro_3243 - hypothetical protein 3230 60.16 -1 3466034..3466894 - 286 87201256 - Saro_3244 - HPr kinase 3231 56.10 -2 3466899..3467144 - 81 87201257 - Saro_3245 - hypothetical protein 3232 63.18 0 3467290..3467547 + 85 87201258 - Saro_3246 - hypothetical protein 3233 67.55 0 3467726..3469084 + 452 87201259 - Saro_3247 - O-antigen polymerase 3234 70.46 +1 3469081..3469791 + 236 87201260 - Saro_3248 - hypothetical protein 3235 66.67 0 3469832..3470386 - 184 87201261 - Saro_3249 - OstA-like protein 3236 66.67 0 3470383..3471027 - 214 87201262 - Saro_3250 - hypothetical protein 3237 65.05 0 3471052..3471669 - 205 87201263 - Saro_3251 - 3'-5' exonuclease 3238 64.92 0 3471830..3472744 + 304 87201264 - Saro_3252 - sulfate adenylyltransferase subunit 2 3239 63.72 0 3472744..3474678 + 644 87201265 - Saro_3253 - bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein 3240 64.18 0 3474721..3475002 + 93 87201266 - Saro_3254 - hypothetical protein 3241 65.59 0 3475038..3476342 - 434 87201267 - Saro_3255 - UDP-glucose 6-dehydrogenase 3242 72.25 +2 3476471..3477151 + 226 87201268 - Saro_3256 - uracil-DNA glycosylase 3243 72.66 +2 3477222..3477638 - 138 87201269 - Saro_3257 - hypothetical protein 3244 63.57 0 3477635..3478150 - 171 87201270 - Saro_3258 - signal peptidase II 3245 63.95 0 3478150..3481056 - 968 87201271 ileS Saro_3259 - isoleucyl-tRNA synthetase 3246 67.86 0 3481250..3482173 - 307 87201272 - Saro_3260 - riboflavin kinase / FMN adenylyltransferase 3247 66.41 0 3482170..3483354 - 394 87201273 - Saro_3261 - peptidase M19, renal dipeptidase 3248 68.63 +1 3483378..3483887 - 169 87201274 - Saro_3262 - dihydrofolate reductase 3249 68.93 +1 3483884..3484942 - 352 87201275 - Saro_3263 - phosphoribosylaminoimidazole carboxylase ATPase subunit 3250 63.99 0 3484957..3485442 - 161 87201276 - Saro_3264 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 3251 65.36 0 3485472..3486158 - 228 87201277 - Saro_3265 - phosphoglycerate mutase 3252 68.73 +1 3486624..3486914 - 96 87201278 - Saro_3266 - hypothetical protein 3253 67.35 0 3486981..3487997 + 338 87201279 - Saro_3267 - L-threonine aldolase 3254 66.88 0 3487994..3488917 + 307 87201280 - Saro_3268 - hypothetical protein 3255 70.32 +1 3488827..3489675 - 282 87201281 - Saro_3269 - NAD-dependent epimerase/dehydratase 3256 66.44 0 3489731..3492346 + 871 87201282 - Saro_3270 - peptidase M1, alanyl aminopeptidase 3257 71.81 +2 3492343..3493101 + 252 87201283 - Saro_3271 - hypothetical protein 3258 66.83 0 3493098..3493721 - 207 87201284 - Saro_3272 - HAD family hydrolase 3259 61.90 -1 3493829..3493954 - 41 87201285 - Saro_3273 - 50S ribosomal protein L36P 3260 65.53 0 3494018..3494899 + 293 87201286 - Saro_3274 - hypothetical protein 3261 63.97 0 3494893..3495894 - 333 87201287 - Saro_3275 - UDP-galactose 4-epimerase 3262 66.05 0 3495967..3496776 - 269 87201288 - Saro_3276 - hypothetical protein 3263 70.88 +1 3496835..3497428 + 197 87201289 - Saro_3277 - hypothetical protein 3264 66.40 0 3497425..3498555 + 376 87201290 - Saro_3278 - peptidase M14, carboxypeptidase A 3265 66.96 0 3498762..3499103 - 113 87201291 - Saro_3279 - arsenate reductase 3266 65.87 0 3499265..3501388 + 707 87201292 - Saro_3280 - TonB-dependent siderophore receptor 3267 67.84 0 3501473..3501982 - 169 87201293 - Saro_3281 - (2Fe-2S)-binding protein 3268 61.96 -1 3502015..3502779 - 254 87201294 - Saro_3282 - hypothetical protein 3269 68.10 0 3502808..3503434 + 208 87201295 - Saro_3283 - hypothetical protein 3270 70.98 +1 3503438..3504133 - 231 87201296 - Saro_3284 - HPP 3271 68.69 +1 3504255..3504797 - 180 87201297 rpsI Saro_3285 - 30S ribosomal protein S9 3272 63.54 0 3504800..3505279 - 159 87201298 rplM Saro_3286 - 50S ribosomal protein L13 3273 68.20 0 3505418..3505744 - 108 87201299 - Saro_3287 - periplasmic divalent cation tolerance protein 3274 67.52 0 3505741..3506793 - 350 87201300 - Saro_3288 - cytochrome oxidase assembly 3275 68.55 +1 3506969..3507340 + 123 87201301 - Saro_3289 - hypothetical protein 3276 66.47 0 3507383..3508378 + 331 87201302 - Saro_3290 - bifunctional sulfur carrier protein/thiazole synthase protein 3277 65.17 0 3508428..3510692 - 754 87201303 - Saro_3291 - malic enzyme 3278 66.55 0 3510824..3512479 - 551 87201304 - Saro_3292 - hypothetical protein 3279 69.38 +1 3512607..3515183 + 858 87201305 - Saro_3293 - DNA mismatch repair protein 3280 70.41 +1 3515176..3515790 + 204 87201306 - Saro_3294 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3281 66.43 0 3515840..3517096 - 418 87201307 - Saro_3295 - Na+ dependent nucleoside transporter-like 3282 63.36 0 3517186..3517851 + 221 87201308 - Saro_3296 - hypothetical protein 3283 67.54 0 3517962..3518873 + 303 87201309 - Saro_3297 - acetylglutamate kinase 3284 71.60 +1 3519032..3519457 + 141 87201310 - Saro_3298 - hypothetical protein 3285 59.67 -1 3519646..3519945 + 99 87201311 - Saro_3299 - protein of unknown function YGGT 3286 67.34 0 3519973..3520866 + 297 87201312 - Saro_3300 - methenyltetrahydrofolate cyclohydrolase 3287 64.94 0 3521161..3521565 + 134 87201313 - Saro_3301 - thioesterase superfamily protein 3288 62.22 0 3521569..3521748 - 59 87201314 - Saro_3302 - hypothetical protein 3289 67.48 0 3521752..3522489 - 245 87201315 - Saro_3303 - 3-demethylubiquinone-9 3-methyltransferase 3290 66.19 0 3522575..3523831 + 418 87201316 - Saro_3304 - aspartate kinase 3291 67.85 0 3523876..3524550 - 224 87201317 - Saro_3305 - pentapeptide repeat-containing protein 3292 67.06 0 3524917..3525945 + 342 87201318 - Saro_3306 - 2-nitropropane dioxygenase, NPD 3293 67.57 0 3525997..3527214 + 405 87201319 - Saro_3307 - major facilitator transporter 3294 65.57 0 3527377..3528012 - 211 87201320 - Saro_3308 - HNH endonuclease 3295 68.29 0 3528182..3529600 - 472 87201321 - Saro_3309 - hypothetical protein 3296 65.19 0 3529785..3532292 + 835 87201322 - Saro_3310 - DNA gyrase subunit B 3297 67.06 0 3532295..3532546 + 83 87201323 - Saro_3311 - hypothetical protein 3298 68.32 0 3532565..3534979 - 804 87201324 - Saro_3312 - DEAD/DEAH box helicase-like 3299 69.70 +1 3535002..3536780 - 592 87201325 - Saro_3313 - hypothetical protein 3300 68.54 +1 3536777..3538483 - 568 87201326 - Saro_3314 - heat shock protein Hsp70 3301 69.54 +1 3538648..3539553 + 301 87201327 - Saro_3315 - transport-associated 3302 65.38 0 3539560..3540963 - 467 87201328 - Saro_3316 - phosphomannomutase 3303 72.39 +2 3541039..3541335 - 98 87201329 - Saro_3317 - heat shock protein DnaJ-like 3304 66.42 0 3541335..3542159 - 274 87201330 - Saro_3318 - ATPases involved in chromosome partitioning-like 3305 67.48 0 3542259..3543119 + 286 87201331 - Saro_3319 - pantothenate synthetase 3306 66.09 0 3543116..3543460 + 114 87201332 - Saro_3320 - hypothetical protein 3307 68.20 0 3543483..3544331 - 282 87201333 - Saro_3321 - metallophosphoesterase 3308 69.01 +1 3544391..3545242 - 283 87201334 - Saro_3322 - hypothetical protein 3309 63.30 0 3545279..3545545 - 88 87201335 - Saro_3323 - hypothetical protein 3310 69.55 +1 3545798..3546109 + 103 87201336 - Saro_3324 - hypothetical protein 3311 64.34 0 3546220..3546735 - 171 87201337 - Saro_3325 - putative transcriptional regulator 3312 69.77 +1 3546871..3547224 + 117 87201338 - Saro_3326 - hypothetical protein 3313 70.27 +1 3547349..3548014 + 221 87201339 - Saro_3327 - hypothetical protein 3314 65.93 0 3548061..3548468 + 135 87201340 - Saro_3328 - protein-methionine-S-oxide reductase 3315 67.32 0 3548577..3550715 + 712 87201341 - Saro_3329 - penicillin-binding protein 1A 3316 68.31 0 3550784..3551026 + 80 87201342 - Saro_3330 - hypothetical protein 3317 66.80 0 3551124..3552656 - 510 87201343 - Saro_3331 - peptidase S1C, Do 3318 64.20 0 3552814..3553665 - 283 87201344 - Saro_3332 - band 7 protein 3319 66.76 0 3553667..3554791 - 374 87201345 - Saro_3333 - HflK protein 3320 68.74 +1 3554941..3555906 + 321 87201346 - Saro_3334 - ATPase 3321 70.53 +1 3555912..3558212 + 766 87201347 - Saro_3335 - twin-arginine translocation pathway signal 3322 67.26 0 3558219..3559232 + 337 87201348 - Saro_3336 - ferrochelatase 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0