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Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3081 64.25 0 3315106..3315642 + 178 87201107 - Saro_3095 - peptide methionine sulfoxide reductase 3082 73.02 +2 3315639..3316898 - 419 87201108 - Saro_3096 - Fmu (Sun) 3083 65.86 0 3316897..3317145 + 82 87201109 - Saro_3097 - hypothetical protein 3084 67.91 0 3317166..3317648 - 160 87201110 - Saro_3098 - hypothetical protein 3085 68.90 +1 3317633..3319111 - 492 87201111 - Saro_3099 - extracellular solute-binding protein 3086 65.36 0 3319158..3319541 - 127 87201112 - Saro_3100 - hypothetical protein 3087 61.00 -1 3319699..3320157 - 152 87201113 - Saro_3101 - TraR/DksA family transcriptional regulator 3088 67.54 0 3320452..3320796 + 114 87201114 - Saro_3102 - Sel1 repeat-containing protein 3089 66.49 0 3320807..3321937 - 376 87201115 - Saro_3103 - hypothetical protein 3090 69.92 +1 3321945..3322712 - 255 87201116 - Saro_3104 - glycerophosphoryl diester phosphodiesterase 3091 68.80 +1 3322693..3323160 - 155 87201117 - Saro_3105 - endoribonuclease L-PSP 3092 63.33 0 3323157..3323786 - 209 87201118 - Saro_3106 - hypothetical protein 3093 65.70 0 3323783..3323989 - 68 87201119 - Saro_3107 - hypothetical protein 3094 60.43 -1 3324128..3324496 + 122 87201120 - Saro_3108 - response regulator receiver protein 3095 59.66 -1 3324517..3325101 - 194 87201121 - Saro_3109 - hypothetical protein 3096 60.42 -1 3325240..3325479 + 79 87201122 - Saro_3110 - hypothetical protein 3097 64.17 0 3325484..3326683 + 399 87201123 - Saro_3111 - serine palmitoyltransferase 3098 67.94 0 3326683..3327546 + 287 87201124 - Saro_3112 - lipolytic enzyme, G-D-S-L 3099 69.03 +1 3327559..3328107 - 182 87201125 - Saro_3113 - ribosomal large subunit pseudouridine synthase E 3100 65.30 0 3328116..3328772 - 218 87201126 - Saro_3114 - glutathione S-transferase-like 3101 70.01 +1 3328925..3329791 + 288 87201127 - Saro_3115 - MltA-interacting MipA 3102 64.81 0 3329801..3330448 - 215 87201128 - Saro_3116 - hypothetical protein 3103 68.66 +1 3330666..3331166 + 166 87201129 - Saro_3117 - hypothetical protein 3104 70.29 +1 3331159..3332481 + 440 87201130 - Saro_3118 - hypothetical protein 3105 68.80 +1 3332560..3333729 + 389 87201131 - Saro_3119 - Phage portal protein, HK97 3106 69.58 +1 3333726..3334034 + 102 87201132 - Saro_3120 - hypothetical protein 3107 69.54 +1 3334031..3334483 + 150 87201133 - Saro_3121 - prohead peptidase 3108 66.84 0 3334561..3335703 + 380 87201134 - Saro_3122 - phage major capsid protein, HK97 3109 69.93 +1 3335824..3336375 + 183 87201135 - Saro_3123 - phiE125 gp8 hypothetical protein 3110 70.20 +1 3336535..3336930 + 131 87201136 - Saro_3124 - hypothetical protein 3111 64.46 0 3336959..3337366 + 135 87201137 - Saro_3125 - Phage major tail protein, TP901-1 3112 71.11 +1 3337366..3337680 + 104 87201138 - Saro_3126 - hypothetical protein 3113 70.63 +1 3337626..3337877 + 83 87201139 - Saro_3127 - hypothetical protein 3114 68.90 +1 3337867..3338448 + 193 87201140 - Saro_3128 - hypothetical protein 3115 66.28 0 3338468..3340807 + 779 87201141 - Saro_3129 - hypothetical protein 3116 68.00 0 3340804..3341625 + 273 87201142 - Saro_3130 - phage protein 3117 66.41 0 3341622..3342017 + 131 87201143 - Saro_3131 - hypothetical protein 3118 67.44 0 3342011..3344215 + 734 87201144 - Saro_3132 - hypothetical protein 3119 63.83 0 3344239..3344697 + 152 87201145 - Saro_3133 - hypothetical protein 3120 64.43 0 3344891..3345964 + 357 87201146 - Saro_3134 - OmpA/MotB 3121 66.32 0 3346022..3346597 + 191 87201147 - Saro_3135 - superoxide dismutase, copper/zinc binding 3122 65.35 0 3346614..3348206 - 530 87201148 - Saro_3136 - major facilitator transporter 3123 65.67 0 3348178..3348879 - 233 87201149 - Saro_3137 - ExsB 3124 67.92 0 3348941..3349420 - 159 87201150 - Saro_3138 - hypothetical protein 3125 64.59 0 3349503..3350417 - 304 87201151 - Saro_3139 - Hsp33 protein 3126 66.35 0 3350414..3351349 - 311 87201152 - Saro_3140 - ornithine carbamoyltransferase 3127 64.57 0 3351346..3352539 - 397 87201153 - Saro_3141 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 3128 68.78 +1 3352715..3353518 - 267 87201154 - Saro_3142 - cold-shock DNA-binding protein family protein 3129 67.59 0 3353813..3354247 + 144 87201155 - Saro_3143 - hypothetical protein 3130 70.60 +1 3354272..3354703 + 143 87201156 - Saro_3144 - hypothetical protein 3131 66.11 0 3354700..3355593 + 297 87201157 - Saro_3145 - hypothetical protein 3132 67.65 0 3355580..3356191 - 203 87201158 - Saro_3146 - TetR family transcriptional regulator 3133 66.41 0 3356399..3358726 + 775 87201159 - Saro_3147 - TonB-dependent receptor 3134 67.05 0 3359153..3360457 - 434 87201160 - Saro_3148 - UDP-glucose/GDP-mannose dehydrogenase 3135 67.29 0 3360447..3361565 - 372 87201161 - Saro_3149 - UDP-N-acetylglucosamine 2-epimerase 3136 67.35 0 3361673..3362998 + 441 87201162 - Saro_3150 - UDP-glucose/GDP-mannose dehydrogenase 3137 65.97 0 3363104..3364102 + 332 87201163 - Saro_3151 - NAD-dependent epimerase/dehydratase 3138 65.14 0 3364131..3364523 - 130 87201164 - Saro_3152 - hypothetical protein 3139 68.38 0 3364643..3365635 - 330 87201165 - Saro_3153 - peptidyl-arginine deiminase 3140 69.07 +1 3365728..3368436 + 902 87201166 - Saro_3154 - glutamate-ammonia-ligase adenylyltransferase 3141 62.03 -1 3368433..3368906 + 157 87201167 - Saro_3155 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 3142 67.30 0 3368961..3369755 + 264 87201168 - Saro_3156 - hypothetical protein 3143 66.11 0 3369948..3370664 + 238 87201169 - Saro_3157 - peptidase M23B 3144 66.52 0 3370779..3371468 - 229 87201170 - Saro_3158 - hypothetical protein 3145 68.77 +1 3371606..3372700 + 364 87201171 - Saro_3159 - hypothetical protein 3146 67.19 0 3372723..3373298 + 191 87201172 - Saro_3160 - beta-Ig-H3/fasciclin 3147 66.15 0 3373450..3375000 + 516 87201173 - Saro_3161 - acyl-CoA synthetase 3148 67.05 0 3375020..3376312 + 430 87201174 - Saro_3162 - cytochrome P450 3149 66.88 0 3376371..3377777 - 468 87201175 - Saro_3163 - sugar transporter 3150 65.25 0 3378071..3379762 - 563 87201176 - Saro_3164 - glucose-methanol-choline oxidoreductase 3151 66.85 0 3379785..3380327 - 180 87201177 - Saro_3165 - twin-arginine translocation pathway signal 3152 65.03 0 3380417..3381637 + 406 87201178 - Saro_3166 - nucleoside:H+ symporter 3153 66.06 0 3381637..3382617 + 326 87201179 - Saro_3167 - twin-arginine translocation pathway signal 3154 68.38 0 3383015..3383947 - 310 87201180 - Saro_3168 - electron transfer flavoprotein, alpha subunit 3155 65.07 0 3383947..3384699 - 250 87201181 - Saro_3169 - electron transfer flavoprotein beta-subunit 3156 63.25 0 3384930..3386129 - 399 87201182 - Saro_3170 - succinyl-CoA synthetase (ADP-forming) beta subunit 3157 71.69 +1 3386353..3387129 + 258 87201183 - Saro_3171 - inositol monophosphatase 3158 65.46 0 3387136..3388131 - 331 87201184 - Saro_3172 - aldo/keto reductase 3159 65.66 0 3388263..3388955 - 230 87201185 - Saro_3173 - OmpA/MotB 3160 66.16 0 3389088..3390464 + 458 87201186 - Saro_3174 - hypothetical protein 3161 65.97 0 3390562..3391995 - 477 87201187 - Saro_3175 - glutamate synthase (NADH) small subunit 3162 65.93 0 3392022..3396662 - 1546 87201188 - Saro_3176 - glutamate synthase (NADH) large subunit 3163 70.20 +1 3396868..3398451 - 527 87201189 - Saro_3177 - hypothetical protein 3164 68.73 +1 3398543..3399751 - 402 87201190 - Saro_3178 - glycosyl transferase, group 1 3165 65.35 0 3399971..3401332 + 453 87201191 - Saro_3179 - O-antigen polymerase 3166 62.34 0 3401412..3401873 + 153 87201192 - Saro_3180 - MaoC-like dehydratase 3167 65.55 0 3401890..3402426 + 178 87201193 - Saro_3181 - hypothetical protein 3168 65.01 0 3402497..3403762 - 421 87201194 - Saro_3182 - polyhydroxyalkanoate depolymerase, intracellular 3169 68.60 +1 3403904..3405715 + 603 87201195 - Saro_3183 - ABC transporter, ATP-binding/permease protein 3170 65.56 0 3405807..3406619 + 270 87201196 - Saro_3184 - undecaprenyl-diphosphatase 3171 64.79 0 3406716..3406982 + 88 87201197 - Saro_3185 - transglycosylase-associated protein 3172 66.32 0 3407063..3407347 + 94 87201198 - Saro_3186 - hypothetical protein 3173 66.03 0 3407491..3408429 - 312 87201199 phhA Saro_3187 - phenylalanine 4-monooxygenase 3174 55.95 -2 3408604..3408771 + 55 87201200 rpmG Saro_3188 - 50S ribosomal protein L33 3175 67.39 0 3408868..3409554 + 228 87201201 - Saro_3189 - outer membrane lipoprotein carrier protein LolA 3176 64.52 0 3409927..3410718 + 263 87201202 - Saro_3190 - exodeoxyribonuclease III 3177 68.45 0 3410715..3411779 + 354 87201203 - Saro_3191 - GTP cyclohydrolase II 3178 65.68 0 3411879..3412181 - 100 87201204 - Saro_3192 - hypothetical protein 3179 72.81 +2 3412230..3412571 - 113 87201205 - Saro_3193 - hypothetical protein 3180 67.37 0 3412609..3413604 - 331 87201206 - Saro_3194 - hypothetical protein 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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