version 1.0
Novosphingobium aromaticivorans DSM 12444, complete genome - 1..3561584 3324 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3037 66.95 0 3266537..3267241 + 234 87201063 - Saro_3051 - negative regulator of AmpC, AmpD 3038 67.82 0 3267702..3268658 + 318 87201064 - Saro_3052 - cation diffusion facilitator family transporter 3039 64.58 0 3269011..3269586 + 191 87201065 - Saro_3053 - beta-Ig-H3/fasciclin 3040 61.58 -1 3269818..3271074 - 418 87201066 clpX Saro_3054 - ATP-dependent protease ATP-binding subunit 3041 64.83 0 3271222..3271929 - 235 87201067 - Saro_3055 - ATP-dependent Clp protease proteolytic subunit ClpP 3042 66.67 0 3272069..3272734 - 221 87201068 - Saro_3056 - hypothetical protein 3043 67.51 0 3272946..3274487 + 513 87201069 - Saro_3057 - amidase 3044 72.43 +2 3274468..3275265 - 265 87201070 - Saro_3058 - hypothetical protein 3045 64.72 0 3275439..3276980 - 513 87201071 tig Saro_3059 - trigger factor 3046 67.20 0 3277719..3279596 - 625 87201072 - Saro_3060 - signal peptide peptidase SppA, 67K type 3047 65.69 0 3279684..3280709 + 341 87201073 pyrB Saro_3061 - aspartate carbamoyltransferase catalytic subunit 3048 71.38 +1 3280706..3281935 + 409 87201074 - Saro_3062 - dihydroorotase 3049 71.50 +1 3282003..3283325 - 440 87201075 - Saro_3063 - tetratricopeptide TPR_4 3050 68.02 0 3283348..3283863 - 171 87201076 - Saro_3064 - hypothetical protein 3051 67.36 0 3283877..3284602 - 241 87201077 - Saro_3065 - cobyrinic acid a,c-diamide synthase 3052 70.05 +1 3284809..3286107 + 432 87201078 - Saro_3066 - Sel1 repeat-containing protein 3053 69.05 +1 3286112..3287326 + 404 87201079 - Saro_3067 - hypothetical protein 3054 65.91 0 3287258..3288442 - 394 87201080 - Saro_3068 - phospholipase D/transphosphatidylase 3055 67.58 0 3288488..3289687 + 399 87201081 - Saro_3069 - glycosyl transferase, group 1 3056 64.21 0 3289801..3290493 + 230 87201082 - Saro_3070 - ErfK/YbiS/YcfS/YnhG 3057 66.16 0 3290531..3291325 - 264 87201083 - Saro_3071 - short chain dehydrogenase 3058 67.18 0 3291337..3292119 - 260 87201084 - Saro_3072 - short-chain dehydrogenase/reductase SDR 3059 65.45 0 3292116..3293099 - 327 87201085 - Saro_3073 - 2-nitropropane dioxygenase, NPD 3060 66.94 0 3293161..3293895 - 244 87201086 - Saro_3074 - sigma 28 (flagella/sporulation) 3061 67.28 0 3294076..3296196 + 706 87201087 - Saro_3075 - TonB-dependent receptor 3062 65.37 0 3296225..3296455 - 76 87201088 - Saro_3076 - hypothetical protein 3063 63.02 0 3296634..3296825 - 63 87201089 - Saro_3077 - hypothetical protein 3064 67.19 0 3296966..3297730 - 254 87201090 - Saro_3078 - hypothetical protein 3065 72.06 +2 3297734..3298048 - 104 87201091 - Saro_3079 - hypothetical protein 3066 64.58 0 3298573..3299244 + 223 87201092 - Saro_3080 - glutathione S-transferase-like 3067 69.35 +1 3299458..3300390 - 310 87201093 - Saro_3081 - NAD-dependent epimerase/dehydratase 3068 68.36 0 3301191..3302078 - 295 87201094 - Saro_3082 - protein tyrosine/serine phosphatase 3069 68.59 +1 3302081..3302860 - 259 87201095 - Saro_3083 - short-chain dehydrogenase/reductase SDR 3070 64.75 0 3302873..3305065 - 730 87201096 - Saro_3084 - TonB-dependent receptor 3071 68.36 0 3305260..3305907 + 215 87201097 - Saro_3085 - TetR family transcriptional regulator 3072 53.91 -2 3306108..3306593 - 161 87201098 - Saro_3086 - hypothetical protein 3073 61.42 -1 3307181..3308095 + 304 87201099 - Saro_3087 - taurine catabolism dioxygenase TauD/TfdA 3074 63.81 0 3308092..3309804 + 570 87201100 - Saro_3088 - dihydroorotase 3075 63.15 0 3309817..3311067 - 416 87201101 - Saro_3089 - LuxR family transcriptional regulator 3076 60.98 -1 3311225..3311611 + 128 87201102 - Saro_3090 - endoribonuclease L-PSP 3077 53.77 -2 3311811..3312593 - 260 87201103 - Saro_3091 - hypothetical protein 3078 68.65 +1 3312771..3313274 - 167 87201104 - Saro_3092 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 3079 65.72 0 3313271..3314119 - 282 87201105 - Saro_3093 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3080 67.25 0 3314172..3315026 - 284 87201106 - Saro_3094 - hypothetical protein 3081 64.25 0 3315106..3315642 + 178 87201107 - Saro_3095 - peptide methionine sulfoxide reductase 3082 73.02 +2 3315639..3316898 - 419 87201108 - Saro_3096 - Fmu (Sun) 3083 65.86 0 3316897..3317145 + 82 87201109 - Saro_3097 - hypothetical protein 3084 67.91 0 3317166..3317648 - 160 87201110 - Saro_3098 - hypothetical protein 3085 68.90 +1 3317633..3319111 - 492 87201111 - Saro_3099 - extracellular solute-binding protein 3086 65.36 0 3319158..3319541 - 127 87201112 - Saro_3100 - hypothetical protein 3087 61.00 -1 3319699..3320157 - 152 87201113 - Saro_3101 - TraR/DksA family transcriptional regulator 3088 67.54 0 3320452..3320796 + 114 87201114 - Saro_3102 - Sel1 repeat-containing protein 3089 66.49 0 3320807..3321937 - 376 87201115 - Saro_3103 - hypothetical protein 3090 69.92 +1 3321945..3322712 - 255 87201116 - Saro_3104 - glycerophosphoryl diester phosphodiesterase 3091 68.80 +1 3322693..3323160 - 155 87201117 - Saro_3105 - endoribonuclease L-PSP 3092 63.33 0 3323157..3323786 - 209 87201118 - Saro_3106 - hypothetical protein 3093 65.70 0 3323783..3323989 - 68 87201119 - Saro_3107 - hypothetical protein 3094 60.43 -1 3324128..3324496 + 122 87201120 - Saro_3108 - response regulator receiver protein 3095 59.66 -1 3324517..3325101 - 194 87201121 - Saro_3109 - hypothetical protein 3096 60.42 -1 3325240..3325479 + 79 87201122 - Saro_3110 - hypothetical protein 3097 64.17 0 3325484..3326683 + 399 87201123 - Saro_3111 - serine palmitoyltransferase 3098 67.94 0 3326683..3327546 + 287 87201124 - Saro_3112 - lipolytic enzyme, G-D-S-L 3099 69.03 +1 3327559..3328107 - 182 87201125 - Saro_3113 - ribosomal large subunit pseudouridine synthase E 3100 65.30 0 3328116..3328772 - 218 87201126 - Saro_3114 - glutathione S-transferase-like 3101 70.01 +1 3328925..3329791 + 288 87201127 - Saro_3115 - MltA-interacting MipA 3102 64.81 0 3329801..3330448 - 215 87201128 - Saro_3116 - hypothetical protein 3103 68.66 +1 3330666..3331166 + 166 87201129 - Saro_3117 - hypothetical protein 3104 70.29 +1 3331159..3332481 + 440 87201130 - Saro_3118 - hypothetical protein 3105 68.80 +1 3332560..3333729 + 389 87201131 - Saro_3119 - Phage portal protein, HK97 3106 69.58 +1 3333726..3334034 + 102 87201132 - Saro_3120 - hypothetical protein 3107 69.54 +1 3334031..3334483 + 150 87201133 - Saro_3121 - prohead peptidase 3108 66.84 0 3334561..3335703 + 380 87201134 - Saro_3122 - phage major capsid protein, HK97 3109 69.93 +1 3335824..3336375 + 183 87201135 - Saro_3123 - phiE125 gp8 hypothetical protein 3110 70.20 +1 3336535..3336930 + 131 87201136 - Saro_3124 - hypothetical protein 3111 64.46 0 3336959..3337366 + 135 87201137 - Saro_3125 - Phage major tail protein, TP901-1 3112 71.11 +1 3337366..3337680 + 104 87201138 - Saro_3126 - hypothetical protein 3113 70.63 +1 3337626..3337877 + 83 87201139 - Saro_3127 - hypothetical protein 3114 68.90 +1 3337867..3338448 + 193 87201140 - Saro_3128 - hypothetical protein 3115 66.28 0 3338468..3340807 + 779 87201141 - Saro_3129 - hypothetical protein 3116 68.00 0 3340804..3341625 + 273 87201142 - Saro_3130 - phage protein 3117 66.41 0 3341622..3342017 + 131 87201143 - Saro_3131 - hypothetical protein 3118 67.44 0 3342011..3344215 + 734 87201144 - Saro_3132 - hypothetical protein 3119 63.83 0 3344239..3344697 + 152 87201145 - Saro_3133 - hypothetical protein 3120 64.43 0 3344891..3345964 + 357 87201146 - Saro_3134 - OmpA/MotB 3121 66.32 0 3346022..3346597 + 191 87201147 - Saro_3135 - superoxide dismutase, copper/zinc binding 3122 65.35 0 3346614..3348206 - 530 87201148 - Saro_3136 - major facilitator transporter 3123 65.67 0 3348178..3348879 - 233 87201149 - Saro_3137 - ExsB 3124 67.92 0 3348941..3349420 - 159 87201150 - Saro_3138 - hypothetical protein 3125 64.59 0 3349503..3350417 - 304 87201151 - Saro_3139 - Hsp33 protein 3126 66.35 0 3350414..3351349 - 311 87201152 - Saro_3140 - ornithine carbamoyltransferase 3127 64.57 0 3351346..3352539 - 397 87201153 - Saro_3141 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 3128 68.78 +1 3352715..3353518 - 267 87201154 - Saro_3142 - cold-shock DNA-binding protein family protein 3129 67.59 0 3353813..3354247 + 144 87201155 - Saro_3143 - hypothetical protein 3130 70.60 +1 3354272..3354703 + 143 87201156 - Saro_3144 - hypothetical protein 3131 66.11 0 3354700..3355593 + 297 87201157 - Saro_3145 - hypothetical protein 3132 67.65 0 3355580..3356191 - 203 87201158 - Saro_3146 - TetR family transcriptional regulator 3133 66.41 0 3356399..3358726 + 775 87201159 - Saro_3147 - TonB-dependent receptor 3134 67.05 0 3359153..3360457 - 434 87201160 - Saro_3148 - UDP-glucose/GDP-mannose dehydrogenase 3135 67.29 0 3360447..3361565 - 372 87201161 - Saro_3149 - UDP-N-acetylglucosamine 2-epimerase 3136 67.35 0 3361673..3362998 + 441 87201162 - Saro_3150 - UDP-glucose/GDP-mannose dehydrogenase 65.30 MEAN 3.21 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0